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Commit 47a801b9 authored by nkindlon's avatar nkindlon
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Updated map's unit test for allowance of numeric ops on non-num cols

parent 9ee6bac8
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...@@ -717,14 +717,16 @@ rm obs exp ...@@ -717,14 +717,16 @@ rm obs exp
########################################################### ###########################################################
# Test that numeric ops for non-numeric columns aren't allowed # Test that numeric ops for non-numeric columns are
# allowed, but give a warning
############################################################ ############################################################
echo " map.t48...\c" echo " map.t48...\c"
echo \ echo \
" " ***** WARNING: Non numeric value chr1 in 1.
***** ***** WARNING: Non numeric value chr1 in 1.
***** ERROR: Column 1 is not a numeric field for database file values.bed." > exp ***** WARNING: Non numeric value chr3 in 1.
$BT map -a ivls.bed -b values.bed -c 1 -o sum 2>&1 > /dev/null | head -3 > obs ***** WARNING: Non numeric value chr3 in 1." > exp
$BT map -a ivls.bed -b values.bed -c 1 -o sum 2>&1 > /dev/null | cat - > obs
check obs exp check obs exp
rm obs exp rm obs exp
...@@ -792,4 +794,3 @@ chr3 100 200 0.5" > exp ...@@ -792,4 +794,3 @@ chr3 100 200 0.5" > exp
$BT map -a ivls.bed -b values4.bed -c 7 -o sample_stddev > obs $BT map -a ivls.bed -b values4.bed -c 7 -o sample_stddev > obs
check obs exp check obs exp
rm obs exp rm obs exp
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