@@ -11,10 +11,17 @@ genomic file formats such as BAM, BED, GFF/GTF, VCF. While each individual tool
*intersect* two interval files), quite sophisticated analyses can be conducted
by combining multiple bedtools operations on the UNIX command line.
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Tutorial
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Interesting usage examples
We have developed a fairly comprehensive `tutorial <http://quinlanlab.org/tutorials/cshl2014/bedtools.html>`_ that demonstrates both the basics, as well as some more advanced examples of how bedtools can help you in your research. Please have a look.
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To whet your appetite, here are a few examples of ways in which bedtools has been used for genome research. If you have interesteding examples, please send them our way and we will add them to the list.
Interesting Usage Examples
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In addition, here are a few examples of ways in which bedtools has been used for genome research. If you have interesteding examples, please send them our way and we will add them to the list.
- `Coverage analysis for targeted DNA capture <http://gettinggeneticsdone.blogspot.com/2014/03/visualize-coverage-exome-targeted-ngs-bedtools.html>`_. Thanks to `Stephen Turner <https://twitter.com/genetics_blog>`_.
