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R3
legacy
bedtools2
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33b93339
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33b93339
authored
12 years ago
by
Aaron
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[DOCS] ommission in multicov
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docs/content/tools/multicov.rst
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33b93339
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@@ -65,7 +65,7 @@ BAM file that overlap.
...
@@ -65,7 +65,7 @@ BAM file that overlap.
chr1 20000 30000 ivl3
chr1 20000 30000 ivl3
chr1 30000 40000 ivl4
chr1 30000 40000 ivl4
$ bedtools multicov -bams aln1.bam aln2.bam aln3.bam
$ bedtools multicov -bams aln1.bam aln2.bam aln3.bam
-bed ivls-of-interest.bed
chr1 0 10000 ivl1 100 2234 0
chr1 0 10000 ivl1 100 2234 0
chr1 10000 20000 ivl2 123 3245 1000
chr1 10000 20000 ivl2 123 3245 1000
chr1 20000 30000 ivl3 213 2332 2034
chr1 20000 30000 ivl3 213 2332 2034
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@@ -88,7 +88,7 @@ command line.
...
@@ -88,7 +88,7 @@ command line.
.. code-block:: bash
.. code-block:: bash
$ bedtools multicov -bams aln1.bam
$ bedtools multicov -bams aln1.bam
-bed ivls-of-interest.bed
chr1 0 10000 ivl1 100
chr1 0 10000 ivl1 100
chr1 10000 20000 ivl2 123
chr1 10000 20000 ivl2 123
chr1 20000 30000 ivl3 213
chr1 20000 30000 ivl3 213
...
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