src/utils/Contexts/ContextBase.cpp

...RecordTools/FileReaders/SingleLineDelimTextFileReader.cpp

...leRecordTools/FileReaders/SingleLineDelimTextFileReader.h

src/utils/FileRecordTools/Records/Record.cpp

src/utils/FileRecordTools/Records/VcfRecord.cpp

src/utils/FileRecordTools/Records/VcfRecord.h

src/utils/RecordOutputMgr/RecordOutputMgr.cpp

src/utils/general/ParseTools.cpp

test/intersect/a_testZeroLen.bed

test/intersect/a_vcfSVtest.vcf

test/intersect/b_testZeroLen.bed

test/intersect/b_vcfSVtest.vcf

test/intersect/new_test-intersect.sh

test/merge/expFormat.bed

test/merge/test-merge.sh

test/merge/vcfSVtest.vcf