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Aaron authored
1. Created separate structs for BED and BEDCOV in order to reduce memory consumption. Savings of ~30%. 2. Changed the binning approach to make 16kb bins the most granular. IntersectBed is now 1/3 faster as a result. 3. Templated the parsing and reporting functions in bedFile. Had to move them to the header file to avoid linker complications. 4. Added CHRPOS as a common type.
Aaron authored1. Created separate structs for BED and BEDCOV in order to reduce memory consumption. Savings of ~30%. 2. Changed the binning approach to make 16kb bins the most granular. IntersectBed is now 1/3 faster as a result. 3. Templated the parsing and reporting functions in bedFile. Had to move them to the header file to avoid linker complications. 4. Added CHRPOS as a common type.
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