Report/Figure: saving upsetr plots
Currently, the UpSetR plots are not saved to PDF (only in the rendered HTML report).
Use print(...) when creating plots to save them to PDF:
pdf(...)
print(UpSetR::upset(...))
dev.off()Also, the plot object can be saved as the other plots and plotted later using print(...). At the moment, the plotting function is called in the rMarkdown files and the rendering script.