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Flasky
======
# BSA4Yeast
This repository contains the source code examples for my O'Reilly book [Flask Web Development](http://www.flaskbook.com).
BSA4Yeast is a comprehensive web application that performs QTL (Quantitative Trait Loci) mapping using bulk segregant analysis (BSA) of yeast sequencing data. It has the following main advantages and features:
The commits and tags in this repository were carefully created to match the sequence in which concepts are presented in the book. Please read the section titled "How to Work with the Example Code" in the book's preface for instructions.
*fully automated
-multiple input file types
*private storage space
-comprehensive annotations
*web-based exploration
## Getting Started
These instructions will get you a copy of the project up and running on your local machine for development and testing purposes. See deployment for notes on how to deploy the project on a live system.
### Prerequisites
What things you need to install the software and how to install them
```
Give examples
```
### Installing
A step by step series of examples that tell you how to get a development env running
Say what the step will be
```
Give the example
```
And repeat
```
until finished
```
End with an example of getting some data out of the system or using it for a little demo
## Running the tests
Explain how to run the automated tests for this system
### Break down into end to end tests
Explain what these tests test and why
```
Give an example
```
### And coding style tests
Explain what these tests test and why
```
Give an example
```
## Deployment
Add additional notes about how to deploy this on a live system
## Built With
* [Dropwizard](http://www.dropwizard.io/1.0.2/docs/) - The web framework used
* [Maven](https://maven.apache.org/) - Dependency Management
* [ROME](https://rometools.github.io/rome/) - Used to generate RSS Feeds
## Contributing
Please read [CONTRIBUTING.md](https://gist.github.com/PurpleBooth/b24679402957c63ec426) for details on our code of conduct, and the process for submitting pull requests to us.
## Versioning
We use [SemVer](http://semver.org/) for versioning. For the versions available, see the [tags on this repository](https://github.com/your/project/tags).
## Authors
* **Billie Thompson** - *Initial work* - [PurpleBooth](https://github.com/PurpleBooth)
See also the list of [contributors](https://github.com/your/project/contributors) who participated in this project.
## License
This project is licensed under the MIT License - see the [LICENSE.md](LICENSE.md) file for details
## Acknowledgments
* Hat tip to anyone whose code was used
* Inspiration
* etc
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