Merge branch 'manual-update1' into 'master'

Manual update1

See merge request elixir/daisy-doc!8

.aspell.en.pws

 personal_ws-1.1 en 0 utf-8
+Affero
+AGPL
 alice
+Alper
 Backend
+backend
 backends
+Biomedicine
+Christophe
 DAISY’s
 DAta
 Dataset
@@ -11,26 +17,43 @@ dataset’s
 datasets
 Datasets
 datatypes
+Ded
 DOI
 du
 GDPR
 GigaScience
 github
 giz
+Grouès
 howto
+Jacek
+Jarosz
 jekyll
+Kavita
 lcsb
 LCSB's
 LDAP
+Lebioda
 LuxPARK
 Menubar
+Pinar
 pre
+projects’s
+Rege
+Reinhard
 repo
+Sandrine
+Satagopam
 STDOUT
+Storages
 SYSCID
 SYstem
 TBC
+Trefois
 Université
 unlinked
+Venkata
+Vilem
 vip
+Yohan
 YYYY

.gitlab-ci.yml

@@ -18,20 +18,6 @@ build:
   variables:
     JEKYLL_ENV: production
 
-
-test_spell_check:
-  image: debian
-  stage: test
-  dependencies:
-     - build
-  script:
-  - apt-get update
-  - apt-get install -y aspell aspell-en
-  - ./test_spell_check.sh
-  except:
-  - master
-
-
 pages:
   stage: deploy
   only:

Gemfile.lock

+GIT
+  remote: https://git-r3lab.uni.lu/core-services/jekyll-theme-lcsb-frozen-components.git
+  revision: 068c2c0edc8ae3b462008bfd9882fa2c36909c2b
+  branch: master
+  specs:
+    jekyll-theme-lcsb-frozen-components (0.0.2)
+      jekyll (> 3.0)
+
+GEM
+  remote: https://rubygems.org/
+  specs:
+    addressable (2.7.0)
+      public_suffix (>= 2.0.2, < 5.0)
+    colorator (1.1.0)
+    concurrent-ruby (1.1.6)
+    em-websocket (0.5.1)
+      eventmachine (>= 0.12.9)
+      http_parser.rb (~> 0.6.0)
+    eventmachine (1.2.7)
+    ffi (1.12.2)
+    forwardable-extended (2.6.0)
+    http_parser.rb (0.6.0)
+    i18n (1.8.2)
+      concurrent-ruby (~> 1.0)
+    jekyll (4.0.0)
+      addressable (~> 2.4)
+      colorator (~> 1.0)
+      em-websocket (~> 0.5)
+      i18n (>= 0.9.5, < 2)
+      jekyll-sass-converter (~> 2.0)
+      jekyll-watch (~> 2.0)
+      kramdown (~> 2.1)
+      kramdown-parser-gfm (~> 1.0)
+      liquid (~> 4.0)
+      mercenary (~> 0.3.3)
+      pathutil (~> 0.9)
+      rouge (~> 3.0)
+      safe_yaml (~> 1.0)
+      terminal-table (~> 1.8)
+    jekyll-feed (0.13.0)
+      jekyll (>= 3.7, < 5.0)
+    jekyll-paginate-v2 (3.0.0)
+      jekyll (>= 3.0, < 5.0)
+    jekyll-sass-converter (2.1.0)
+      sassc (> 2.0.1, < 3.0)
+    jekyll-seo-tag (2.6.1)
+      jekyll (>= 3.3, < 5.0)
+    jekyll-theme-lcsb-default (0.3.17)
+      jekyll (~> 4.0)
+      jekyll-seo-tag (~> 2.5)
+    jekyll-watch (2.2.1)
+      listen (~> 3.0)
+    kramdown (2.1.0)
+    kramdown-parser-gfm (1.1.0)
+      kramdown (~> 2.0)
+    liquid (4.0.3)
+    listen (3.2.1)
+      rb-fsevent (~> 0.10, >= 0.10.3)
+      rb-inotify (~> 0.9, >= 0.9.10)
+    mercenary (0.3.6)
+    minima (2.5.1)
+      jekyll (>= 3.5, < 5.0)
+      jekyll-feed (~> 0.9)
+      jekyll-seo-tag (~> 2.1)
+    pathutil (0.16.2)
+      forwardable-extended (~> 2.6)
+    public_suffix (4.0.4)
+    rb-fsevent (0.10.3)
+    rb-inotify (0.10.1)
+      ffi (~> 1.0)
+    rouge (3.17.0)
+    safe_yaml (1.0.5)
+    sassc (2.2.1)
+      ffi (~> 1.9)
+    terminal-table (1.8.0)
+      unicode-display_width (~> 1.1, >= 1.1.1)
+    unicode-display_width (1.7.0)
+
+PLATFORMS
+  ruby
+
+DEPENDENCIES
+  bundler (> 2.0)
+  jekyll (~> 4.0)
+  jekyll-feed (~> 0.6)
+  jekyll-paginate-v2 (~> 3)
+  jekyll-theme-lcsb-default (~> 0.3)
+  jekyll-theme-lcsb-frozen-components (~> 0.0.1)!
+  minima (~> 2.5)
+  tzinfo-data
+
+BUNDLED WITH
+   2.1.4

README.md

+# Daisy documentation
+
+## How to get started
+
+1. clone the repository
+
+2. install dependencies using bundler
+
+```bash
+bundle install --path /vendor/bundle
+```
+
+1. run server locally
+
+```bash
+bundle exec jekyll server
+```
+

about.md

----
-layout: page
-title: About
-permalink: /about/
-order: 2
----
-
-
-DAISY is open source software designed to keep data inventory,  it helps organisations meet the accountability requirement of the EU General Data Protection Regulation.
-
-How to cite us:
-
- * DAISY: A Data Information System for accountability under the General Data Protection Regulation. GigaScience, Volume 8, Issue 12, December 2019, [giz140](https://doi.org/10.1093/gigascience/giz140).
-
-
-Source code and issue tracking:
-
- * See DAISY github repo [here](https://github.com/elixir-luxembourg/daisy/).
-
-

auditors.md

+---
+layout: page
+title: Auditor guide
+permalink: /auditors/
+order: 3
+---
+
+# DAISY user guide for the auditors
+
+<br>
+**Under construction** &#128296;

contact.md

+---
+layout: page
+title: Contact us
+permalink: /contact/
+order: 4
+---
+
+# Contact and credits
+
+For more details or information about DAISY application, contact us:
+
+ - Primary contact: [Pinar Alper](mailto:pinar.alper@uni.lu)
+ - Primary contact: [Regina Becker](mailto:regina.becker@uni.lu)
+
+ - Developer: [Valentin Grouès](mailto:valentin.groues@uni.lu)
+ - Developer: [Jacek Lebioda](mailto:jacek.lebioda@uni.lu)
+ - Developer [Yohan Jarosz](mailto:yohan.jarosz@uni.lu)
+ - Developer [Kavita Rege ](mailto:kavita.rege@uni.lu)
+
+ - Contributor: [Vilem Ded](mailto:vilem.ded@uni.lu)
+ - Contributor: [Sandrine Munoz](mailto:sandrine.munoz@uni.lu)
+ - Contributor: [Christophe Trefois](mailto:christophe.trefois@uni.lu)
+ - Contributor: [Venkata Satagopam](mailto:venkata.satagopam@uni.lu)
+ - Contributor: [Reinhard Schneider](mailto:reinhard.schneider@uni.lu)
+
+<br>
+In case of problems with this website please contact [LCSB data stewards](mailto:lcsb-datastewards@uni.lu).

help.md

----
-layout: page
-title: Help
-permalink: /the-help/
-order: 3
----
-
-In case of problems with this website please contact [LCSB data stewards](mailto:lcsb-datastewards@uni.lu).
\ No newline at end of file