From e6c834152fbc09ab3f0786c2d615a28c559b05a1 Mon Sep 17 00:00:00 2001
From: Piotr Gawron <piotr.gawron@uni.lu>
Date: Mon, 7 Dec 2020 11:06:52 +0100
Subject: [PATCH] test if create dummy script is executed without issues
---
.gitlab-ci.yml | 8 ++++++++
smash/db_scripts/create_dummy_data.py | 14 +++++++-------
2 files changed, 15 insertions(+), 7 deletions(-)
diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index aa60a1b1..b69183fe 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -64,6 +64,14 @@ test_python_latest:
- coverage run --source web manage.py test -v3
- coverage report -m --omit="*/test*,*/migrations*,*debug_utils*"
+test_create_dummy_script:
+ <<: *test_definition
+ script:
+ - cp "local_settings_ci_sqlite.py" "smash/smash/local_settings.py"
+ - cd smash
+ - python manage.py makemigrations web && python manage.py migrate
+ - python db_scripts/create_dummy_data.py
+
build_debian:
image: debian
stage: build
diff --git a/smash/db_scripts/create_dummy_data.py b/smash/db_scripts/create_dummy_data.py
index dfcb4fff..dadf16b1 100644
--- a/smash/db_scripts/create_dummy_data.py
+++ b/smash/db_scripts/create_dummy_data.py
@@ -435,6 +435,7 @@ class smashProvider(BaseProvider):
virus_iga_1 = choice(["Borderline", "Positive", "Negative"], 1, p=[0.02, 0.03, 0.95])[0]
virus_igg_1 = choice(["Borderline", "Positive", "Negative"], 1, p=[0.02, 0.03, 0.95])[0]
if virus_test_1_result is None:
+ virus_test_1_collection_date = ''
virus_test_1_updated = fake.date_between(start_date='-30d', end_date='-4d')
elif virus_test_1_result == "Inconclusive":
virus_test_1_updated = fake.date_between(start_date='-30d', end_date='-4d')
@@ -447,14 +448,13 @@ class smashProvider(BaseProvider):
virus_test_1_collection_date = fake.date_between(start_date='-30d', end_date='-4d')
study_subject, _ = StudySubject.objects.update_or_create(nd_number=nd_number, subject=subject,
- virus_test_1_result=virus_test_1_result,
- virus_test_1_updated=virus_test_1_updated,
- virus_test_1_collection_date=virus_test_1_collection_date,
- virus_test_1_iga_status=virus_iga_1,
- virus_test_1_igg_status=virus_igg_1,
defaults={'default_location': default_location, 'type': type,
'screening_number': screening_number, 'study': study})
-
+ study_subject.set_custom_field_value('Visit 0 RT-PCR update date', virus_test_1_updated)
+ study_subject.set_custom_field_value('Virus 0 RT-PCR', virus_test_1_result)
+ study_subject.set_custom_field_value('Visit 0 RT-PCR collection date', virus_test_1_collection_date)
+ study_subject.set_custom_field_value('Visit 0 IgA Status', virus_iga_1)
+ study_subject.set_custom_field_value('Visit 0 IgG Status', virus_igg_1)
self.alreadyCreatedStudySubjects.append(study_subject)
return study_subject
@@ -608,7 +608,7 @@ class smashProvider(BaseProvider):
defaults = {'first_name': first_name, 'last_name': last_name,
'email': email, 'unit': unit, 'specialization': specialization,
'phone_number': phone_number, 'user': user}
-
+
worker, _ = Worker.objects.update_or_create(first_name=first_name,
last_name=last_name, defaults=defaults)
--
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