This is a basic Gene Set Enrichment plugin. It calculates enrichment of elements from selected overlay(s) in the pathways of the map (grey areas).<br><br>
This is a basic Gene Set Enrichment plugin. It calculates enrichment of elements from selected overlay(s) in the pathways of the map (coloured areas).<br><br>
<u>Show enriched pathways</u> button calculates the enrichment scores (Bonferroni-adjusted p-value), lists the significantly enriched pathways in the window "Gene Set Enrichment Analysis" window, and highlights them.<br><br>
<u>Reset</u> button removes the results and the enrichment.<br><br>
If multiple overlays are selected, the enrichment will be calculated for the combined gene sets.