don't fetch elements that are referenced by node

41 jobs for 1591-upload-data-overlay in 60 minutes and 3 seconds (queued for 8 seconds)
Name Stage Failure
failed
test:backend:converter_CellDesigner:jdk-8 Test The script exceeded the maximum execution time set for the job
	at org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:345)
at org.apache.maven.surefire.booter.ForkedBooter.execute(ForkedBooter.java:126)
at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:418)
Caused by: org.xml.sax.SAXParseException; Premature end of file.
at org.apache.xerces.parsers.DOMParser.parse(Unknown Source)
at org.apache.xerces.jaxp.DocumentBuilderImpl.parse(Unknown Source)
at lcsb.mapviewer.common.XmlParser.getXmlDocumentFromInputSource(XmlParser.java:191)
... 39 more
ERROR: Job failed: execution took longer than 1h0m0s seconds

failed
test:backend:converter_CellDesigner:jdk-11 Test The script exceeded the maximum execution time set for the job
	at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:418)
Caused by: org.xml.sax.SAXParseException; Premature end of file.
at org.apache.xerces.parsers.DOMParser.parse(Unknown Source)
at org.apache.xerces.jaxp.DocumentBuilderImpl.parse(Unknown Source)
at lcsb.mapviewer.common.XmlParser.getXmlDocumentFromInputSo2021-12-15 12:48:26,552 WARN [main] (CellDesignerXmlParser.jurce(XmlParser.java:191)
... 47 more
ava:641) - Invalid map id: 'F007-inos.sbgn' changed to 'F007_inos_sbgn'
2021-12-15 12:48:26,553 WARN [main] (CellDesignerElementCollection.java:73) - Invalid element id
ERROR: Job failed: execution took longer than 1h0m0s seconds

failed
test:backend:converter_SBML:jdk-11 Test The script exceeded the maximum execution time set for the job
	at org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:345)
at org.apache.maven.surefire.booter.ForkedBooter.execute(ForkedBooter.java:126)
at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:418)
Caused by: org.xml.sax.SAXParseException; Premature end of file.
at org.apache.xerces.parsers.DOMParser.parse(Unknown Source)
at org.apache.xerces.jaxp.DocumentBuilderImpl.parse(Unknown Source)
at lcsb.mapviewer.common.XmlParser.getXmlDocumentFromInputSource(XmlParser.java:191)
... 40 more
ERROR: Job failed: execution took longer than 1h0m0s seconds

failed
test:backend:converter_SBML:jdk-8 Test The script exceeded the maximum execution time set for the job
	at org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:345)
at org.apache.maven.surefire.booter.ForkedBooter.execute(ForkedBooter.java:126)
at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:418)
Caused by: org.xml.sax.SAXParseException; Premature end of file.
at org.apache.xerces.parsers.DOMParser.parse(Unknown Source)
at org.apache.xerces.jaxp.DocumentBuilderImpl.parse(Unknown Source)
at lcsb.mapviewer.common.XmlParser.getXmlDocumentFromInputSource(XmlParser.java:191)
... 40 more
ERROR: Job failed: execution took longer than 1h0m0s seconds