Skip to content

GitLab

Merge branch 'piotr.gawron-devel_15.1.x-patch-24810' into 'devel_15.1.x' 

use https repositories

See merge request !1373
34 jobs for devel_15.1.x in 60 minutes and 3 seconds (queued for 5 seconds)
2639e7f7
No related merge requests found.
Name Stage Failure
failed
test:backend:service:jdk-8 Test 
[ERROR] -> [Help 1]
[ERROR] 
[ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch.
[ERROR] Re-run Maven using the -X switch to enable full debug logging.
[ERROR] 
[ERROR] For more information about the errors and possible solutions, please read the following articles:
[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoFailureException
Cleaning up project directory and file based variables
ERROR: Job failed: exit code 1
failed
test:backend:service:jdk-11 Test 
[ERROR] -> [Help 1]
[ERROR] 
[ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch.
[ERROR] Re-run Maven using the -X switch to enable full debug logging.
[ERROR] 
[ERROR] For more information about the errors and possible solutions, please read the following articles:
[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoFailureException
Cleaning up project directory and file based variables
ERROR: Job failed: exit code 1
failed
test:backend:annotation:jdk-11 Test The script exceeded the maximum execution time set for the job 
	at lcsb.mapviewer.annotation.cache.CachableInterface.getWebPageContent(CachableInterface.java:200)
	at lcsb.mapviewer.annotation.services.annotators.CazyAnnotator.uniprotToCazy(CazyAnnotator.java:186)
	... 41 more
Caused by: java.util.concurrent.TimeoutException
	at java.base/java.util.concurrent.FutureTask.get(FutureTask.java:204)
	at lcsb.mapviewer.annotation.cache.WebPageDownloader.getFromNetwork(WebPageDownloader.java:154)
	... 44 more
2021-12-07 05:02:14,193 ERROR [pool-73-thread-1] (WebPageDownloader.java:131) - Problem with fetching url (3 tries): http://www.cazy.org/search?page=recherche&recherche=Q00012&tag=10
ERROR: Job failed: execution took longer than 1h0m0s seconds
failed
test:backend:annotation:jdk-8 Test The script exceeded the maximum execution time set for the job 
2021-12-07 05:03:14,758 DEBUG [main] (PubmedParser.java:132) - Pubmed article (id=12345) not found in cache. Accessing WebService...
2021-12-07 05:03:14,982 DEBUG [main] (PubmedParser.java:288) - New europepmc API version: 6.7
2021-12-07 05:03:15,140  INFO [main] (HikariDataSource.java:110) - HikariPool-8 - Starting...
2021-12-07 05:03:15,153  INFO [main] (HikariDataSource.java:123) - HikariPool-8 - Start completed.
2021-12-07 05:03:17,084  INFO [main] (Slf4jLog.java:49) - Database: jdbc:postgresql://postgres:5432/map_viewer (PostgreSQL 9.6)
2021-12-07 05:03:17,290  INFO [main] (Slf4jLog.java:49) - Current version of schema "public": 15.1.0.20200814
2021-12-07 05:03:17,291  WARN [main] (Slf4jLog.java:53) - outOfOrder mode is active. Migration of schema "public" may not be reproducible.
2021-12-07 05:03:17,293  INFO [main] (Slf4jLog.java:49) - Schema "public" is up to date. No migration necessary.
ERROR: Job failed: execution took longer than 1h0m0s seconds