Merge branch 'piotr.gawron-devel_15.1.x-patch-24810' into 'devel_15.1.x'

use https repositories

See merge request !1373
34 jobs for devel_15.1.x in 60 minutes and 3 seconds (queued for 5 seconds)
Status Name Job ID Coverage
  Test
failed test:backend:annotation:jdk-11 #320876

01:00:01

failed test:backend:annotation:jdk-8 #320872

01:00:01

passed test:backend:CellDesigner_plugin:jdk-8 #320880

00:02:22

85.3357%
passed test:backend:commons:jdk-11 #320869

00:01:58

84.4813%
passed test:backend:commons:jdk-8 #320867

00:01:49

84.4813%
passed test:backend:converter_CellDesigner:jdk-11 #320891

00:01:51

95.6077%
passed test:backend:converter_CellDesigner:jdk-8 #320888

00:04:08

95.6362%
passed test:backend:converter_graphics:jdk-11 #320899

00:01:24

73.2%
passed test:backend:converter_graphics:jdk-8 #320896

00:01:00

73.2059%
passed test:backend:converter:jdk-11 #320885

00:03:14

62.1762%
passed test:backend:converter:jdk-8 #320883

00:01:20

61.8329%
passed test:backend:converter_SBGNML:jdk-11 #320903

00:04:35

88.9947%
passed test:backend:converter_SBGNML:jdk-8 #320902

00:03:33

88.9934%
passed test:backend:converter_SBML:jdk-11 #320909

00:01:55

89.7434%
passed test:backend:converter_SBML:jdk-8 #320907

00:02:32

89.7287%
passed test:backend:model_command:jdk-11 #320922

00:01:11

76.1665%
passed test:backend:model_command:jdk-8 #320919

00:00:54

76.1764%
passed test:backend:model:jdk-11 #320916

00:01:36

87.4831%
passed test:backend:model:jdk-8 #320911

00:01:53

87.4838%
passed test:backend:pathvisio:jdk-11 #320928

00:02:06

85.4611%
passed test:backend:pathvisio:jdk-8 #320925

00:01:18

85.4632%
passed test:backend:persist:jdk-11 #320933

00:01:53

90.7628%
passed test:backend:persist:jdk-8 #320930

00:01:49

90.7806%
passed test:backend:rest:jdk-11 #320940

00:04:21

43.0957%
passed test:backend:rest:jdk-8 #320936

00:05:52

43.0892%
failed test:backend:service:jdk-11 #320946

00:06:48

failed test:backend:service:jdk-8 #320943

00:06:30

passed test:backend:web:jdk-11 #320952

00:11:53

47.5367%
passed test:backend:web:jdk-8 #320949

00:12:26

47.5367%
passed test:dependency_conflict #320955

00:03:44

passed test:frontend #320865

00:02:32

85.49%
passed test_postgres_10_compatibility #320961

00:03:06

passed test_postgres_11_compatibility #320964

00:02:46

passed test_postgres_9_3_compatibility #320958

00:02:00

 
Name Stage Failure
failed
test:backend:service:jdk-8 Test
[ERROR] -> [Help 1]
[ERROR]
[ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch.
[ERROR] Re-run Maven using the -X switch to enable full debug logging.
[ERROR]
[ERROR] For more information about the errors and possible solutions, please read the following articles:
[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoFailureException
Cleaning up project directory and file based variables
ERROR: Job failed: exit code 1

failed
test:backend:service:jdk-11 Test
[ERROR] -> [Help 1]
[ERROR]
[ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch.
[ERROR] Re-run Maven using the -X switch to enable full debug logging.
[ERROR]
[ERROR] For more information about the errors and possible solutions, please read the following articles:
[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoFailureException
Cleaning up project directory and file based variables
ERROR: Job failed: exit code 1

failed
test:backend:annotation:jdk-11 Test The script exceeded the maximum execution time set for the job
	at lcsb.mapviewer.annotation.cache.CachableInterface.getWebPageContent(CachableInterface.java:200)
at lcsb.mapviewer.annotation.services.annotators.CazyAnnotator.uniprotToCazy(CazyAnnotator.java:186)
... 41 more
Caused by: java.util.concurrent.TimeoutException
at java.base/java.util.concurrent.FutureTask.get(FutureTask.java:204)
at lcsb.mapviewer.annotation.cache.WebPageDownloader.getFromNetwork(WebPageDownloader.java:154)
... 44 more
2021-12-07 05:02:14,193 ERROR [pool-73-thread-1] (WebPageDownloader.java:131) - Problem with fetching url (3 tries): http://www.cazy.org/search?page=recherche&recherche=Q00012&tag=10
ERROR: Job failed: execution took longer than 1h0m0s seconds

failed
test:backend:annotation:jdk-8 Test The script exceeded the maximum execution time set for the job
2021-12-07 05:03:14,758 DEBUG [main] (PubmedParser.java:132) - Pubmed article (id=12345) not found in cache. Accessing WebService...
2021-12-07 05:03:14,982 DEBUG [main] (PubmedParser.java:288) - New europepmc API version: 6.7
2021-12-07 05:03:15,140 INFO [main] (HikariDataSource.java:110) - HikariPool-8 - Starting...
2021-12-07 05:03:15,153 INFO [main] (HikariDataSource.java:123) - HikariPool-8 - Start completed.
2021-12-07 05:03:17,084 INFO [main] (Slf4jLog.java:49) - Database: jdbc:postgresql://postgres:5432/map_viewer (PostgreSQL 9.6)
2021-12-07 05:03:17,290 INFO [main] (Slf4jLog.java:49) - Current version of schema "public": 15.1.0.20200814
2021-12-07 05:03:17,291 WARN [main] (Slf4jLog.java:53) - outOfOrder mode is active. Migration of schema "public" may not be reproducible.
2021-12-07 05:03:17,293 INFO [main] (Slf4jLog.java:49) - Schema "public" is up to date. No migration necessary.
ERROR: Job failed: execution took longer than 1h0m0s seconds