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Merge branch 'ucsc-issues' into 'devel_15.1.x' 

Ucsc issues

See merge request !1362
34 jobs for devel_15.1.x in 60 minutes and 2 seconds (queued for 12 seconds)
bde7b610
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Name Stage Failure
failed
test:backend:annotation:jdk-11 Test The script exceeded the maximum execution time set for the job 
2021-10-26 05:01:38,837  INFO [main] (HikariDataSource.java:352) - HikariPool-7 - Shutdown completed.
2021-10-26 05:01:38,986  INFO [main] (HikariDataSource.java:110) - HikariPool-8 - Starting...
2021-10-26 05:01:38,994  INFO [main] (HikariDataSource.java:123) - HikariPool-8 - Start completed.
2021-10-26 05:01:41,419  INFO [main] (Slf4jLog.java:49) - Database: jdbc:postgresql://postgres:5432/map_viewer (PostgreSQL 9.6)
2021-10-26 05:01:41,632  INFO [main] (Slf4jLog.java:49) - Current version of schema "public": 15.1.0.20200814
2021-10-26 05:01:41,632  WARN [main] (Slf4jLog.java:53) - outOfOrder mode is active. Migration of schema "public" may not be reproducible.
2021-10-26 05:01:41,633  INFO [main] (Slf4jLog.java:49) - Schema "public" is up to date. No migration necessary.
2021-10-26 05:02:11,850 ERROR [pool-717-thread-1] (WebPageDownloader.java:131) - Problem with fetching url (3 tries): http://www.cazy.org/search?page=recherche&recherche=A8MCI6&tag=10
ERROR: Job failed: execution took longer than 1h0m0s seconds
failed
test:backend:converter_CellDesigner:jdk-8 Test There has been a runner system failure, please try again 
[INFO] 
[INFO] --- maven-dependency-plugin:2.8:purge-local-repository (default-cli) @ frontend-js ---
[INFO] 
[INFO] -------------------------< lcsb.mapviewer:web >-------------------------
[INFO] Building Mapviewer web interface 1.0                             [16/17]
[INFO] --------------------------------[ war ]---------------------------------
[INFO] 
[INFO] --- maven-dependency-plugin:3.1.1:purge-local-repository (default-cli) @ web ---
ERROR: Job failed (system failure): aborted: terminated
failed
test:backend:converter_SBML:jdk-8 Test There has been a runner system failure, please try again 
	at java.net.AbstractPlainSocketImpl.doConnect(AbstractPlainSocketImpl.java:350)
	at java.net.AbstractPlainSocketImpl.connectToAddress(AbstractPlainSocketImpl.java:206)
	at java.net.AbstractPlainSocketImpl.connect(AbstractPlainSocketImpl.java:188)
	at java.net.SocksSocketImpl.connect(SocksSocketImpl.java:392)
	at java.net.Socket.connect(Socket.java:589)
	at org.apache.http.conn.socket.PlainConnectionSocketFactory.connectSocket(PlainConnectionSocketFactory.java:75)
	at org.apache.http.impl.conn.DefaultHttpClientConnectionOperator.connect(DefaultHttpClientConnectionOperator.java:142)
	... 48 more
ERROR: Job failed (system failure): aborted: terminated
failed
test:backend:converter_SBML:jdk-11 Test There has been a runner system failure, please try again 
	at java.base/java.net.AbstractPlainSocketImpl.doConnect(AbstractPlainSocketImpl.java:399)
	at java.base/java.net.AbstractPlainSocketImpl.connectToAddress(AbstractPlainSocketImpl.java:242)
	at java.base/java.net.AbstractPlainSocketImpl.connect(AbstractPlainSocketImpl.java:224)
	at java.base/java.net.SocksSocketImpl.connect(SocksSocketImpl.java:403)
	at java.base/java.net.Socket.connect(Socket.java:591)
	at org.apache.http.conn.socket.PlainConnectionSocketFactory.connectSocket(PlainConnectionSocketFactory.java:75)
	at org.apache.http.impl.conn.DefaultHttpClientConnectionOperator.connect(DefaultHttpClientConnectionOperator.java:142)
	... 48 more
ERROR: Job failed (system failure): aborted: terminated
failed
test:backend:converter_CellDesigner:jdk-11 Test There has been a runner system failure, please try again 
	at java.base/java.net.AbstractPlainSocketImpl.doConnect(AbstractPlainSocketImpl.java:399)
	at java.base/java.net.AbstractPlainSocketImpl.connectToAddress(AbstractPlainSocketImpl.java:242)
	at java.base/java.net.AbstractPlainSocketImpl.connect(AbstractPlainSocketImpl.java:224)
	at java.base/java.net.SocksSocketImpl.connect(SocksSocketImpl.java:403)
	at java.base/java.net.Socket.connect(Socket.java:591)
	at org.apache.http.conn.socket.PlainConnectionSocketFactory.connectSocket(PlainConnectionSocketFactory.java:75)
	at org.apache.http.impl.conn.DefaultHttpClientConnectionOperator.connect(DefaultHttpClientConnectionOperator.java:142)
	... 55 more
ERROR: Job failed (system failure): aborted: terminated
failed
test:backend:annotation:jdk-8 Test The script exceeded the maximum execution time set for the job 
	at lcsb.mapviewer.annotation.cache.CachableInterface.getWebPageContent(CachableInterface.java:200)
	at lcsb.mapviewer.annotation.services.annotators.CazyAnnotator.uniprotToCazy(CazyAnnotator.java:186)
	... 57 more
Caused by: java.util.concurrent.TimeoutException
	at java.util.concurrent.FutureTask.get(FutureTask.java:205)
	at lcsb.mapviewer.annotation.cache.WebPageDownloader.getFromNetwork(WebPageDownloader.java:154)
	... 60 more
2021-10-26 05:01:48,335 ERROR [pool-797-thread-1] (WebPageDownloader.java:131) - Problem with fetching url (3 tries): http://www.cazy.org/search?page=recherche&recherche=Q00012&tag=10
ERROR: Job failed: execution took longer than 1h0m0s seconds