core merge requestshttps://git-r3lab.uni.lu/minerva/core/-/merge_requests2018-08-03T10:04:37+02:00https://git-r3lab.uni.lu/minerva/core/-/merge_requests/370remove unneeded shell scripting from RPM; adjust RPM installation instruction2018-08-03T10:04:37+02:00Nils Christianremove unneeded shell scripting from RPM; adjust RPM installation instructionhttps://git-r3lab.uni.lu/minerva/core/-/merge_requests/369Resolve "Functionality to update Terms of Service"2018-08-02T18:39:48+02:00Piotr GawronResolve "Functionality to update Terms of Service"Additionally there was relatively big refactor to remove redundant (copy-pasted) code regarding tabs management.
Closes #466Additionally there was relatively big refactor to remove redundant (copy-pasted) code regarding tabs management.
Closes #466v12.1.0https://git-r3lab.uni.lu/minerva/core/-/merge_requests/368fresh install of debian package uses flyway2018-07-31T18:55:30+02:00Piotr Gawronfresh install of debian package uses flywayFresh installation of debian package uses flyway, so there is no need for db scripting anymore.
Closes #389
Fresh installation of debian package uses flyway, so there is no need for db scripting anymore.
Closes #389
v12.1.0https://git-r3lab.uni.lu/minerva/core/-/merge_requests/367Resolve "color of highlighted element"2018-07-31T14:05:49+02:00Piotr GawronResolve "color of highlighted element"Closes #472Closes #472https://git-r3lab.uni.lu/minerva/core/-/merge_requests/366broken chebi annotator doesn't stop data uploading2018-07-31T12:16:03+02:00Piotr Gawronbroken chebi annotator doesn't stop data uploadinghttps://git-r3lab.uni.lu/minerva/core/-/merge_requests/365Resolve "creating user's overlay TYPE = PROTEIN is not working"2018-07-31T11:21:08+02:00Piotr GawronResolve "creating user's overlay TYPE = PROTEIN is not working"Closes #467Closes #467https://git-r3lab.uni.lu/minerva/core/-/merge_requests/364Resolve "Error on setting the zoom level of the submap"2018-07-31T10:20:04+02:00Piotr GawronResolve "Error on setting the zoom level of the submap"Closes #462Closes #462https://git-r3lab.uni.lu/minerva/core/-/merge_requests/363Resolve "memory limit on docker instance"2018-07-30T19:27:08+02:00Piotr GawronResolve "memory limit on docker instance"Closes #468Closes #468https://git-r3lab.uni.lu/minerva/core/-/merge_requests/362Resolve "getting list of reactions by element id doesn't work for big set"2018-07-30T19:18:26+02:00Piotr GawronResolve "getting list of reactions by element id doesn't work for big set"Closes #465Closes #465https://git-r3lab.uni.lu/minerva/core/-/merge_requests/361Resolve "the name of commented protein is remembered in a new comment"2018-07-30T16:20:11+02:00Piotr GawronResolve "the name of commented protein is remembered in a new comment"Closes #463Closes #463https://git-r3lab.uni.lu/minerva/core/-/merge_requests/360Resolve "Overlay download (v12)"2018-07-30T13:24:08+02:00Piotr GawronResolve "Overlay download (v12)"Closes #444Closes #444https://git-r3lab.uni.lu/minerva/core/-/merge_requests/359Resolve "use database migration framework"2018-07-30T11:29:30+02:00Piotr GawronResolve "use database migration framework"This Merge request resolves issue with manual db migrations. All script starting from version 12.1.0 will be managed by flyway library. Due to that all manual migration that were done starting from version 12.1.0 should be inserted into ...This Merge request resolves issue with manual db migrations. All script starting from version 12.1.0 will be managed by flyway library. Due to that all manual migration that were done starting from version 12.1.0 should be inserted into flyway history table (see the [flyway_manual_init.sql](/uploads/fb62887ac3a296d71326e26aecd746e9/flyway_manual_init.sql)) - this should affect only software developers who were working on version 12.1.0 up to now. Everybody who will start after MR is accepted wouldn't encounter any difficulties.
Regarding debian package. For now there is still manual migration and initialization of database, because there is no way to tell flyway what the previous version of database was. However, manual migration is limited to anything prior to 12.1.0. Further scripts will be migrated automatically by flyway.
Additionally there is new continuous integration test for checking if installation of debian package was performed properly and minerva website is available from localhost after installation.
Closes #389v12.1.0https://git-r3lab.uni.lu/minerva/core/-/merge_requests/358Resolve "Admin panel: Select valid annotations layout and function"2018-07-24T13:52:32+02:00Piotr GawronResolve "Admin panel: Select valid annotations layout and function"Closes #321Closes #321v12.1.0https://git-r3lab.uni.lu/minerva/core/-/merge_requests/35712.0.1 into master2018-07-24T09:41:04+02:00Piotr Gawron12.0.1 into masterhttps://git-r3lab.uni.lu/minerva/core/-/merge_requests/356Resolve "Comments"2018-07-23T20:00:16+02:00Piotr GawronResolve "Comments"Closes #442Closes #442https://git-r3lab.uni.lu/minerva/core/-/merge_requests/355Resolve "admin's manual: pop-up window is not displayed"2018-07-23T17:45:55+02:00Piotr GawronResolve "admin's manual: pop-up window is not displayed"Closes #460Closes #460https://git-r3lab.uni.lu/minerva/core/-/merge_requests/354Resolve "problem with loading old maps"2018-07-23T17:27:49+02:00Piotr GawronResolve "problem with loading old maps"Closes #461Closes #461https://git-r3lab.uni.lu/minerva/core/-/merge_requests/353when there is no google api key defined parameter is not entered to the url2018-07-23T12:27:32+02:00Piotr Gawronwhen there is no google api key defined parameter is not entered to the urlasked by @nils.christianasked by @nils.christianhttps://git-r3lab.uni.lu/minerva/core/-/merge_requests/352remove directory with contents of unpacked war file on uninstall2018-07-23T12:03:30+02:00Nils Christianremove directory with contents of unpacked war file on uninstallhttps://git-r3lab.uni.lu/minerva/core/-/merge_requests/351Resolve "Display of overlay (CellDesigner layer)"2018-07-20T16:32:59+02:00Piotr GawronResolve "Display of overlay (CellDesigner layer)"Closes #438Closes #438