core merge requestshttps://git-r3lab.uni.lu/minerva/core/-/merge_requests2019-01-28T12:09:15+01:00https://git-r3lab.uni.lu/minerva/core/-/merge_requests/599Resolve "Improve display of progress when downloading a genome"2019-01-28T12:09:15+01:00Sascha HerzingerResolve "Improve display of progress when downloading a genome"Closes #652Closes #652v12.2.0~beta.0Piotr GawronPiotr Gawronhttps://git-r3lab.uni.lu/minerva/core/-/merge_requests/596Resolve "Report bug utility issues"2019-01-28T12:06:50+01:00Sascha HerzingerResolve "Report bug utility issues"Closes #648Closes #648v12.2.0~beta.0Piotr GawronPiotr Gawronhttps://git-r3lab.uni.lu/minerva/core/-/merge_requests/592Resolve "start and end of curveSegment in listOfSpeciesReferenceGlyphs in SBM...2019-01-23T13:46:50+01:00Piotr GawronResolve "start and end of curveSegment in listOfSpeciesReferenceGlyphs in SBML are wrong"Closes #646Closes #646v12.2.0~beta.0https://git-r3lab.uni.lu/minerva/core/-/merge_requests/591Resolve "SBML Reaction glyphs missing curve segment result in NullPointer exc...2019-01-23T12:47:49+01:00Piotr GawronResolve "SBML Reaction glyphs missing curve segment result in NullPointer exception"Closes #647
Also SBML validation passes for multi packageCloses #647
Also SBML validation passes for multi packagev12.2.0~beta.0https://git-r3lab.uni.lu/minerva/core/-/merge_requests/590fixed bootstrap jquery-ui conflict2019-01-23T08:42:31+01:00Sascha Herzingerfixed bootstrap jquery-ui conflictCloses #427Closes #427v12.2.0~beta.0Piotr GawronPiotr Gawronhttps://git-r3lab.uni.lu/minerva/core/-/merge_requests/585Resolve "allow plugins to listen on search tab change"2019-01-21T14:23:59+01:00Piotr GawronResolve "allow plugins to listen on search tab change"Closes #631Closes #631v12.2.0~beta.0https://git-r3lab.uni.lu/minerva/core/-/merge_requests/584Resolve "Database corrupted by unit tests"2019-01-18T15:51:35+01:00Piotr GawronResolve "Database corrupted by unit tests"Closes #643Closes #643v12.2.0~beta.0https://git-r3lab.uni.lu/minerva/core/-/merge_requests/581Resolve "export to sbml layout creates partial lines for operators"2019-01-17T11:36:17+01:00Piotr GawronResolve "export to sbml layout creates partial lines for operators"Closes #645Closes #645v12.2.0~beta.0https://git-r3lab.uni.lu/minerva/core/-/merge_requests/580Resolve "translating pdmap spring18 to SBML throws NPE"2019-01-16T14:40:36+01:00Piotr GawronResolve "translating pdmap spring18 to SBML throws NPE"@david.hoksza
Closes #644
@david.hoksza
Closes #644
v12.2.0~beta.0https://git-r3lab.uni.lu/minerva/core/-/merge_requests/578Resolve "problem with installation on ubuntu 18"2019-01-11T15:11:56+01:00Piotr GawronResolve "problem with installation on ubuntu 18"Closes #594Closes #594v12.2.0~beta.0https://git-r3lab.uni.lu/minerva/core/-/merge_requests/566Resolve "allow showing and hiding data overlays in plugin API"2019-01-10T16:36:58+01:00Piotr GawronResolve "allow showing and hiding data overlays in plugin API"Closes #607Closes #607v12.2.0~beta.0https://git-r3lab.uni.lu/minerva/core/-/merge_requests/565Resolve "Add option to disable `REQUEST AN ACCOUNT`"2019-01-08T15:08:46+01:00Piotr GawronResolve "Add option to disable `REQUEST AN ACCOUNT`"Closes #626Closes #626v12.2.0~beta.0https://git-r3lab.uni.lu/minerva/core/-/merge_requests/563Resolve "Add logic when to display `BACK TO MAP` link"2019-01-08T14:49:07+01:00Piotr GawronResolve "Add logic when to display `BACK TO MAP` link"Closes #627Closes #627v12.2.0~beta.0https://git-r3lab.uni.lu/minerva/core/-/merge_requests/562Resolve "CLEAR button"2019-01-08T14:00:00+01:00Piotr GawronResolve "CLEAR button"Closes #630Closes #630v12.2.0~beta.0https://git-r3lab.uni.lu/minerva/core/-/merge_requests/560Resolve "add support for modifications and states in sbml export/import"2019-01-08T13:02:43+01:00Piotr GawronResolve "add support for modifications and states in sbml export/import"Closes #572
Support for modifications is implemented using SpeciesType features from multi package.
@marek.ostaszewski If you want me to implement it using Binding Sites from multi package please let me know how the data structure...Closes #572
Support for modifications is implemented using SpeciesType features from multi package.
@marek.ostaszewski If you want me to implement it using Binding Sites from multi package please let me know how the data structures inside sbml should look like.v12.2.0~beta.0https://git-r3lab.uni.lu/minerva/core/-/merge_requests/553Resolve "allow to open multiple data overlays using url GET param"2018-12-27T14:06:50+01:00Piotr GawronResolve "allow to open multiple data overlays using url GET param"Closes #595Closes #595v12.2.0~beta.0https://git-r3lab.uni.lu/minerva/core/-/merge_requests/552Resolve "Upload of genetic_variant overlay not working"2018-12-21T10:38:32+01:00Piotr GawronResolve "Upload of genetic_variant overlay not working"Closes #578Closes #578v12.2.0~beta.0https://git-r3lab.uni.lu/minerva/core/-/merge_requests/551WIP: Resolve "Upload of genetic_variant overlay not working"2018-12-21T09:45:19+01:00Piotr GawronWIP: Resolve "Upload of genetic_variant overlay not working"Closes #578Closes #578v12.2.0~beta.0https://git-r3lab.uni.lu/minerva/core/-/merge_requests/550WIP: Resolve "Double line in logic-gate modification"2019-01-08T14:38:23+01:00Piotr GawronWIP: Resolve "Double line in logic-gate modification"Closes #592Closes #592v12.2.0~beta.0https://git-r3lab.uni.lu/minerva/core/-/merge_requests/549Resolve "Corrections to Export functionality"2018-12-20T15:35:43+01:00Piotr GawronResolve "Corrections to Export functionality"Closes #555Closes #555v12.2.0~beta.0