core merge requestshttps://git-r3lab.uni.lu/minerva/core/-/merge_requests2018-04-05T16:14:02+02:00https://git-r3lab.uni.lu/minerva/core/-/merge_requests/272Resolve "parse reaction stochiometry"2018-04-05T16:14:02+02:00Piotr GawronResolve "parse reaction stochiometry"Due to that there is a change with REST API and plugin API responses:
Stoichiometry is associated with reaction node (but not with the alias/species). Therefore when checking for reaction products/modifiers/reactants the result will p...Due to that there is a change with REST API and plugin API responses:
Stoichiometry is associated with reaction node (but not with the alias/species). Therefore when checking for reaction products/modifiers/reactants the result will provide you with the Product/Modifier/Reactant structures instead of aliases. Those structures contain getAlias method that will return you the previously stored Alias structure.
Closes #368v12.0.0https://git-r3lab.uni.lu/minerva/core/-/merge_requests/271Resolve "list of properties visualized in left panel should be configurable"2018-04-05T13:50:45+02:00Piotr GawronResolve "list of properties visualized in left panel should be configurable"Closes #367Closes #367v12.0.0https://git-r3lab.uni.lu/minerva/core/-/merge_requests/269Resolve "Admin panel: Select annotators layout and function"2018-04-05T11:58:04+02:00Piotr GawronResolve "Admin panel: Select annotators layout and function"Closes #320Closes #320v12.0.0https://git-r3lab.uni.lu/minerva/core/-/merge_requests/268Resolve "Admin panel: Show (x) entries lost on page refresh"2018-04-03T13:52:39+02:00Piotr GawronResolve "Admin panel: Show (x) entries lost on page refresh"user preferences store information about length of the tables in projects, users and configuration tabs
Closes #354user preferences store information about length of the tables in projects, users and configuration tabs
Closes #354v12.0.0https://git-r3lab.uni.lu/minerva/core/-/merge_requests/267layout of the dialog + help tips added2018-03-30T18:03:23+02:00Piotr Gawronlayout of the dialog + help tips addedv12.0.0https://git-r3lab.uni.lu/minerva/core/-/merge_requests/266Missing line segments in SBML layout are put into reaction 'Curve' object2018-03-30T15:11:05+02:00Piotr GawronMissing line segments in SBML layout are put into reaction 'Curve' objectReaction 'curve' object should be always filled with lines connecting products and reactants
Closes #366Reaction 'curve' object should be always filled with lines connecting products and reactants
Closes #366v12.0.0https://git-r3lab.uni.lu/minerva/core/-/merge_requests/265Resolve "The same species appears multiple times in SBML"2018-03-30T13:06:41+02:00Piotr GawronResolve "The same species appears multiple times in SBML"Closes #365Closes #365v12.0.0https://git-r3lab.uni.lu/minerva/core/-/merge_requests/264Resolve "Overlay and annotation display"2018-03-30T11:53:07+02:00Piotr GawronResolve "Overlay and annotation display"Closes #359Closes #359v12.0.0https://git-r3lab.uni.lu/minerva/core/-/merge_requests/262some optimizations + fix on pubmed listing2018-03-29T14:54:13+02:00Piotr Gawronsome optimizations + fix on pubmed listingv12.0.0https://git-r3lab.uni.lu/minerva/core/-/merge_requests/261Resolve ""UNKNOWN DISEASE MAP""2018-03-28T19:12:33+02:00Piotr GawronResolve ""UNKNOWN DISEASE MAP""Closes #357Closes #357v12.0.0https://git-r3lab.uni.lu/minerva/core/-/merge_requests/260Resolve "remove unnecessary data from model"2018-03-28T19:09:24+02:00Piotr GawronResolve "remove unnecessary data from model"Closes #352Closes #352v12.0.0https://git-r3lab.uni.lu/minerva/core/-/merge_requests/259Resolve "Display of Minerva version"2018-03-28T17:50:48+02:00Piotr GawronResolve "Display of Minerva version"Closes #356Closes #356v12.0.0https://git-r3lab.uni.lu/minerva/core/-/merge_requests/258Resolve "Admin panel: lag in loading of the projects list"2018-03-28T16:19:32+02:00Piotr GawronResolve "Admin panel: lag in loading of the projects list"Closes #353Closes #353v12.0.0https://git-r3lab.uni.lu/minerva/core/-/merge_requests/257Resolve "Internal Server Error when updating project that doesn't have model"2018-03-27T13:13:46+02:00Piotr GawronResolve "Internal Server Error when updating project that doesn't have model"Closes #351Closes #351v12.0.0https://git-r3lab.uni.lu/minerva/core/-/merge_requests/255Resolve "Admin panel: Configuration items should be grouped"2018-03-23T10:45:22+01:00Piotr GawronResolve "Admin panel: Configuration items should be grouped"Closes #311Closes #311v12.0.0https://git-r3lab.uni.lu/minerva/core/-/merge_requests/254Resolve "Main view: Compartments are not selectable"2018-03-22T17:34:48+01:00Piotr GawronResolve "Main view: Compartments are not selectable"Closes #308Closes #308v12.0.0https://git-r3lab.uni.lu/minerva/core/-/merge_requests/253Resolve "Admin panel: refresh problem and potential privilege clash when addi...2018-03-22T15:42:55+01:00Piotr GawronResolve "Admin panel: refresh problem and potential privilege clash when adding a new user"Closes #313Closes #313v12.0.0https://git-r3lab.uni.lu/minerva/core/-/merge_requests/252Resolve "Admin panel: Create new user - default privileges"2018-03-22T15:15:57+01:00Piotr GawronResolve "Admin panel: Create new user - default privileges"Closes #312Closes #312v12.0.0https://git-r3lab.uni.lu/minerva/core/-/merge_requests/251Resolve "Admin panel: new user style"2018-03-22T14:27:17+01:00Piotr GawronResolve "Admin panel: new user style"Closes #319Closes #319v12.0.0https://git-r3lab.uni.lu/minerva/core/-/merge_requests/247Resolve "Admin panel: lost privileges to the map upon upload"2018-03-22T11:55:32+01:00Piotr GawronResolve "Admin panel: lost privileges to the map upon upload"Closes #342Closes #342v12.0.0