Commits · d0e1d32e39b6969e96d5fd182cf7c4597c9abd65 · minerva / core

18 Aug, 2020 6 commits
- Merge branch '1357-sbgn-view-state-variables-are-not-stadium-shape' into 'master' · d0e1d32e
  Piotr Gawron authored Aug 18, 2020
```
Resolve "SBGN view: state variables are not stadium shape"

Closes #1357

See merge request !1240
```
  d0e1d32e
- usestadium shape for state · 718994b4
  Piotr Gawron authored Aug 18, 2020
  
  718994b4
- Merge branch '1359-identifiers-org-url-not-processed' into 'master' · fff5c5ab
  Piotr Gawron authored Aug 18, 2020
```
Resolve "identifiers.org url not processed"

Closes #1359

See merge request !1239
```
  fff5c5ab
- additional miriam types handled · c9e19853
  Piotr Gawron authored Aug 18, 2020
  
  c9e19853
- parse new miriam format for all urls · 2c9b9a53
  Piotr Gawron authored Aug 18, 2020
  
  2c9b9a53
- Merge branch '1356-reference-to-alias-from-text-glyph' into 'master' · b1473e5f
  Piotr Gawron authored Aug 18, 2020
```
Resolve "reference to alias from textGlyph is taken from wrong attribute"

Closes #1354 and #1356

See merge request !1238
```
  b1473e5f
17 Aug, 2020 11 commits
- unit tests fixed · 954aa768
  Piotr Gawron authored Aug 17, 2020
  
  954aa768
- textGlyph reference is taken from proper attribute · 6757baca
  Piotr Gawron authored Aug 17, 2020
  
  6757baca
- changelog updated · d9172505
  Piotr Gawron authored Aug 17, 2020
  
  d9172505
- default text align for species should be centered · 645dea95
  Piotr Gawron authored Aug 17, 2020
  
  645dea95
- text alignment with TOP align was incorrect · 9b0c5666
  Piotr Gawron authored Aug 17, 2020
  
  9b0c5666
- CellDesiogner does not alow to serialize label width/height · a25ceafa
  Piotr Gawron authored Aug 17, 2020
  
  a25ceafa
- serialization over celldesigner does not prevent dimension of text label · 47c90381
  Piotr Gawron authored Aug 17, 2020
  
  47c90381
- sbgnml did not export text label border properly · 6e1b429b
  Piotr Gawron authored Aug 17, 2020
  
  6e1b429b
- check null only once · 0e438f45
  Piotr Gawron authored Aug 17, 2020
  
  0e438f45
- it's name point coordinates not global · 90a6033a
  Piotr Gawron authored Aug 17, 2020
  
  90a6033a
- data model contain border coordinates for text label in Element · faf3fc3e
  Piotr Gawron authored Aug 17, 2020
  
  faf3fc3e
14 Aug, 2020 2 commits
- Merge branch 'merge-15.0.3' into 'master' · 28333f55
  Piotr Gawron authored Aug 14, 2020
```
Merge 15.0.3

See merge request !1236
```
  28333f55
- Merge remote-tracking branch 'origin/devel_15.0.x' into merge-15.0.3 · 8dd088f0
  Piotr Gawron authored Aug 14, 2020
  
  8dd088f0
13 Aug, 2020 18 commits
- Merge branch '1351-escape-xml' into 'devel_15.0.x' · 1559bd9d
  Piotr Gawron authored Aug 13, 2020
```
tag order fixed

See merge request !1235
```
  1559bd9d
- changelog updated · 49fc6c83
  Piotr Gawron authored Aug 13, 2020
  
  49fc6c83
- tag order fixed · 0646a475
  Piotr Gawron authored Aug 13, 2020
  
  0646a475
- Merge branch '1351-escape-xml' into 'devel_15.0.x' · f57e9f63
  Piotr Gawron authored Aug 13, 2020
```
Resolve "GPML: Conversion does not escape the & symbol"

See merge request !1234
```
  f57e9f63
- changelog updated · 6c69837c
  Piotr Gawron authored Aug 13, 2020
  
  6c69837c
- name of non empty complexes is escaped · 5eec457f
  Piotr Gawron authored Aug 13, 2020
  
  5eec457f
- escpae modificationresidue name · 17fda2cf
  Piotr Gawron authored Aug 13, 2020
  
  17fda2cf
- species name is escaped · ad574875
  Piotr Gawron authored Aug 13, 2020
  
  ad574875
- unused code removed · 01cc4707
  Piotr Gawron authored Aug 13, 2020
  
  01cc4707
- complex name is escaped against xml characters · 0709752f
  Piotr Gawron authored Aug 13, 2020
  
  0709752f
- Merge branch '1350-catalist-point-invalid' into 'devel_15.0.x' · c566368f
  Piotr Gawron authored Aug 13, 2020
```
closest point to line was inproperly computed

See merge request !1233
```
  c566368f
- compartment name is escaped against xml characters · 33767395
  Piotr Gawron authored Aug 13, 2020
  
  33767395
- closest point to line was inproperly computed · 35e4ddd4
  Piotr Gawron authored Aug 13, 2020
  
  35e4ddd4
- Merge branch '1349-gpml-names' into 'devel_15.0.x' · 17c0ad8b
  Piotr Gawron authored Aug 13, 2020
```
Resolve "Correct encoding of Chebi and Entrez data sources in GPML converter"

See merge request !1232
```
  17c0ad8b
- identifier names fixed · ab38d0b2
  Piotr Gawron authored Aug 13, 2020
  
  ab38d0b2
- check if project exists · 0ff36db7
  Piotr Gawron authored Aug 13, 2020
  
  0ff36db7
- Merge branch '1333-concurrency-issue' into 'devel_15.0.x' · 55ef0bc0
  Piotr Gawron authored Aug 13, 2020
```
concurrency issue fixed

See merge request !1230
```
  55ef0bc0
- concurrency issue fixed · 1cebd474
  Piotr Gawron authored Aug 13, 2020
  
  1cebd474
12 Aug, 2020 3 commits
- Merge branch... · c24fab99
  Piotr Gawron authored Aug 12, 2020
```
Merge branch '1281-celldesigner-ignores-all-rdf-description-block-in-case-it-contains-not-supported-bqmodel' into 'devel_15.0.x'

hasTaxon was not properly exportede to CellDesigner

See merge request !1229
```
  c24fab99
- hasTaxon was not properly exportede to CellDesigner · 0cd2d041
  Piotr Gawron authored Aug 12, 2020
  
  0cd2d041
- Merge branch 'conflict-in-update-preferences' into 'devel_15.0.x' · b347fdd6
  Piotr Gawron authored Aug 12, 2020
```
Conflict in update preferences

See merge request !1228
```
  b347fdd6