Commits · 8d0dc7afa56b7e269dd4f30a591f792b9929272b · minerva / core · GitLab

18 Jul, 2018 1 commit
- ldap connector implemented · 8d0dc7af
  Piotr Gawron authored Jul 18, 2018
  
  8d0dc7af
13 Jul, 2018 5 commits
- Merge branch '370-genes-annotations' into 'master' · 7c40dabc
  Piotr Gawron authored Jul 13, 2018
```
Resolve "Genes annotations don't show"

Closes #370 and #19

See merge request !345
```
  7c40dabc
- visualization of modifications properly shows all types of modifications · 4e9f4bf0
  Piotr Gawron authored Jul 13, 2018
  
  4e9f4bf0
- rest API provide information about all modifications · 6eab06f8
  Piotr Gawron authored Jul 13, 2018
  
  6eab06f8
- drawing modifications implemented for all types of modifications · 6043d89c
  Piotr Gawron authored Jul 13, 2018
  
  6043d89c
- processing modification site for rna/antisense rna uses proper modification type · b833152e
  Piotr Gawron authored Jul 13, 2018
  
  b833152e
12 Jul, 2018 6 commits
- export to xml of modifications fixed · 96dd9860
  Piotr Gawron authored Jul 12, 2018
  
  96dd9860
- TranscriptionSite data model supported · 48e20687
  Piotr Gawron authored Jul 12, 2018
  
  48e20687
- unit tests fixed + subclasses use proper discrimantor · d6fad8c4
  Piotr Gawron authored Jul 12, 2018
  
  d6fad8c4
- BindingRegion data model is supported · 60984743
  Piotr Gawron authored Jul 12, 2018
  
  60984743
- BindingRegion data model · 994a828e
  Piotr Gawron authored Jul 12, 2018
  
  994a828e
- ModificationType enum extracted · 2f93cf65
  Piotr Gawron authored Jul 12, 2018
  
  2f93cf65
11 Jul, 2018 8 commits
- creating modifications simplified · ba1088ea
  Piotr Gawron authored Jul 11, 2018
  
  ba1088ea
- cell designer structures for storing modification data simplified · 6932c247
  Piotr Gawron authored Jul 11, 2018
  
  6932c247
- species modifications changed in hierarchical structure · ca4d2258
  Piotr Gawron authored Jul 11, 2018
  
  ca4d2258
- ElementModification interface removed · a83396a1
  Piotr Gawron authored Jul 11, 2018
  
  a83396a1
- rna region is a subclass of modification residue · b2c643f0
  Piotr Gawron authored Jul 11, 2018
  
  b2c643f0
- antesense rna region is a subclass of modification residue · 1eff0b42
  Piotr Gawron authored Jul 11, 2018
  
  1eff0b42
- ModificationSite and Residue classes extracted · 14a66f69
  Piotr Gawron authored Jul 11, 2018
  
  14a66f69
- rna region uses width instead of CellDesigner relative size · 29a98a2a
  Piotr Gawron authored Jul 11, 2018
  
  29a98a2a
10 Jul, 2018 3 commits
- rna regions use x,y coordinates instead of CellDesigner angle · 1b12ded6
  Piotr Gawron authored Jul 10, 2018
  
  1b12ded6
- protein modification uses string mapping for state · 1294cbb8
  Piotr Gawron authored Jul 10, 2018
  
  1294cbb8
- protein modification has x,y coordinats instead of CellDesigner angle · 1fe7ff92
  Piotr Gawron authored Jul 10, 2018
  
  1fe7ff92
09 Jul, 2018 3 commits
- unused CellDesigner parameters removed · bac4b5bb
  Piotr Gawron authored Jul 09, 2018
  
  bac4b5bb
- antisense rna region has width with absolute values instead of CellDesigner relative values · ee9b37d7
  Piotr Gawron authored Jul 09, 2018
  
  ee9b37d7
- antisensernaregion uses string type maping · f96f720b
  Piotr Gawron authored Jul 09, 2018
  
  f96f720b
06 Jul, 2018 8 commits
- antisense rna are visualized · 3ef46380
  Piotr Gawron authored Jul 06, 2018
  
  3ef46380
- position is passed properly to the model · d45c3603
  Piotr Gawron authored Jul 06, 2018
  
  d45c3603
- coordinates of antisense rna region are absolute x,y values · 2a51de93
  Piotr Gawron authored Jul 06, 2018
  
  2a51de93
- test modified to use mockito · 48fb447c
  Piotr Gawron authored Jul 06, 2018
  
  48fb447c
- Merge branch '72-genome-browser' into 'devel_12.1.x' · 69cf66ee
  Piotr Gawron authored Jul 06, 2018
```
Resolve "Genome browser in submaps not working"

See merge request !344
```
  69cf66ee
- Merge branch '72-genome-browser' of https://git-r3lab.uni.lu/minerva/core into 72-genome-browser · fc34f65d
  Piotr Gawron authored Jul 06, 2018
  
  fc34f65d
- opening genomics on submap fixed · 90517ee5
  Piotr Gawron authored Jul 06, 2018
  
  90517ee5
- workaround to fix problem with pileup on openalyers · 770e7fbf
  Piotr Gawron authored Jul 06, 2018
  
  770e7fbf
05 Jul, 2018 6 commits
- vcf file created for variants doesn't include nulls · 8b368097
  Piotr Gawron authored Jul 05, 2018
  
  8b368097
- adding gene variant data overlay is possible · a816341e
  Piotr Gawron authored Jul 04, 2018
  
  a816341e
- jsdoc fixed · 8528c7b5
  Piotr Gawron authored Jul 03, 2018
  
  8528c7b5
- adding of gene mappings implemented · 422e1cc0
  Piotr Gawron authored Jul 03, 2018
  
  422e1cc0
- possibility to remove gene mapping · a7de276e
  Piotr Gawron authored Jul 03, 2018
  
  a7de276e
- adding of reference genomes implemented · 4042b4da
  Piotr Gawron authored Jul 03, 2018
  
  4042b4da