Commits · 24d4acad5f54ac75cb1d6cfd706ab51f6b8674bf · minerva / core · GitLab

29 May, 2019 19 commits
- listOfFunctionDefinitions cannot be empty (but is optional) · 24d4acad
  Piotr Gawron authored May 29, 2019
  
  24d4acad
- list of function must appear before list of units (according to SBML specification) · 5a6d4df1
  Piotr Gawron authored May 29, 2019
  
  5a6d4df1
- silence some log entries · 26b5973d
  Piotr Gawron authored May 29, 2019
  
  26b5973d
- making sure that export of colors is handled properly · ff697009
  Piotr Gawron authored May 29, 2019
  
  ff697009
- import of modifier color is properly handled in case there is also boolean operator · 949ea4d7
  Piotr Gawron authored May 29, 2019
  
  949ea4d7
- tag for null objects don't crash · d5f28b05
  Piotr Gawron authored May 29, 2019
  
  d5f28b05
- some logs are silenced · bc4c2799
  Piotr Gawron authored May 29, 2019
  
  bc4c2799
- compilation error fixed · ce9dde0a
  Piotr Gawron authored May 29, 2019
  
  ce9dde0a
- common code refactored · 07b33199
  Piotr Gawron authored May 29, 2019
  
  07b33199
- remove duplicate entries in lines · bd04c4d5
  Piotr Gawron authored May 29, 2019
  
  bd04c4d5
- when creating layout for self reaction create a line that is not empty · 22754eae
  Piotr Gawron authored May 29, 2019
  
  22754eae
- remove duplicate entries from line · 91e86f7b
  Piotr Gawron authored May 29, 2019
  
  91e86f7b
- unit tests should use valid input data · e67903a5
  Piotr Gawron authored May 29, 2019
  
  e67903a5
- line in abstractNode is required · feb648f9
  Piotr Gawron authored May 29, 2019
  
  feb648f9
- after database restriction changed some test required fixing · ecd2643e
  Piotr Gawron authored May 29, 2019
  
  ecd2643e
- changelog updated · b49cfa90
  Piotr Gawron authored May 29, 2019
  
  b49cfa90
- dist file shouldn't be in repo · 4f850839
  Piotr Gawron authored May 29, 2019
  
  4f850839
- old reaction.getCenterLine method removed · 4e0f7dd4
  Piotr Gawron authored May 29, 2019
  
  4e0f7dd4
- center line should have proper line type assigned · 2da95dd8
  Piotr Gawron authored May 29, 2019
  
  2da95dd8
28 May, 2019 15 commits
- reaction style is based on center line of reaction · b5786fc0
  Piotr Gawron authored May 28, 2019
  
  b5786fc0
- color is aasigned to center line · e24e5fef
  Piotr Gawron authored May 28, 2019
  
  e24e5fef
- point on line is computed properly · f7312993
  Piotr Gawron authored May 28, 2019
  
  f7312993
- point on line is computed properly · 3ea58610
  Piotr Gawron authored May 28, 2019
  
  3ea58610
- use copy of a point (might introduce problems in the future) · ff8452e2
  Piotr Gawron authored May 28, 2019
  
  ff8452e2
- import from wikipathways provides center line · 01132dad
  Piotr Gawron authored May 28, 2019
  
  01132dad
- import of Sbgml provides center line for reaction · 1d1e8893
  Piotr Gawron authored May 28, 2019
  
  1d1e8893
- export of reaction with two modifiers connected with operator was skipping some points · c017f87a
  Piotr Gawron authored May 28, 2019
  
  c017f87a
- persistence must be set to cascade · 9d49eb0b
  Piotr Gawron authored May 28, 2019
  
  9d49eb0b
- method computing point laying on the line implemented (it can be anywheere on... · 345e23ab
  Piotr Gawron authored May 28, 2019
```
method computing point laying on the line implemented (it can be anywheere on the line between two points)
```
  345e23ab
- central line is exported/imported in sbml · 6068057b
  Piotr Gawron authored May 28, 2019
  
  6068057b
- debug removed · 8682a18e
  Piotr Gawron authored May 28, 2019
  
  8682a18e
- when there are multiple input operators in reaction one operator ends where the next start · be9640e2
  Piotr Gawron authored May 28, 2019
  
  be9640e2
- boolean gate operator has non zero line · d37e6e5d
  Piotr Gawron authored May 28, 2019
  
  d37e6e5d
- when transforming lines create defensive copy of lines · 345b351b
  Piotr Gawron authored May 28, 2019
  
  345b351b
27 May, 2019 6 commits
- when providing automatic layout set center line properly · affb89d3
  Piotr Gawron authored May 27, 2019
  
  affb89d3
- typo · 595af049
  Piotr Gawron authored May 27, 2019
  
  595af049
- some unit tests require additional information in input data · f55a7953
  Piotr Gawron authored May 27, 2019
  
  f55a7953
- anchor point is computed based on new data model · 059ab2f2
  Piotr Gawron authored May 27, 2019
  
  059ab2f2
- center line for truncation reaction implemented · 698356fd
  Piotr Gawron authored May 27, 2019
  
  698356fd
- center line defined for heterodimer association · c4a61491
  Piotr Gawron authored May 27, 2019
  
  c4a61491