From f7ea42d0501ac6dbc44b020ce274804fb1b9b3ca Mon Sep 17 00:00:00 2001
From: Piotr Gawron <piotr.gawron@uni.lu>
Date: Mon, 22 May 2017 16:16:09 +0200
Subject: [PATCH] api gives info about complex and compartment
---
.../lcsb/mapviewer/api/project/ProjectRestImpl.java | 13 +++++++++++++
1 file changed, 13 insertions(+)
diff --git a/rest-api/src/main/java/lcsb/mapviewer/api/project/ProjectRestImpl.java b/rest-api/src/main/java/lcsb/mapviewer/api/project/ProjectRestImpl.java
index 6d2eaf0347..bd7c92feab 100644
--- a/rest-api/src/main/java/lcsb/mapviewer/api/project/ProjectRestImpl.java
+++ b/rest-api/src/main/java/lcsb/mapviewer/api/project/ProjectRestImpl.java
@@ -62,6 +62,7 @@ import lcsb.mapviewer.model.map.reaction.Product;
import lcsb.mapviewer.model.map.reaction.Reactant;
import lcsb.mapviewer.model.map.reaction.Reaction;
import lcsb.mapviewer.model.map.species.Element;
+import lcsb.mapviewer.model.map.species.Species;
import lcsb.mapviewer.model.user.User;
import lcsb.mapviewer.services.SecurityException;
import lcsb.mapviewer.services.UserAccessException;
@@ -375,6 +376,16 @@ public class ProjectRestImpl {
value = element.getFullName();
} else if (column.equals("abbreviation")) {
value = element.getAbbreviation();
+ } else if (column.equals("compartmentid")) {
+ if (element.getCompartment() != null) {
+ value = element.getCompartment().getId();
+ }
+ } else if (column.equals("complexid")) {
+ if (element instanceof Species) {
+ if (((Species) element).getComplex() != null) {
+ value = ((Species) element).getComplex().getId();
+ }
+ }
} else if (column.equals("references")) {
value = annotationViewFactory.createList(element.getMiriamData());
} else if (column.equals("synonyms")) {
@@ -407,6 +418,8 @@ public class ProjectRestImpl {
columnsSet.add("description");
columnsSet.add("type");
columnsSet.add("symbol");
+ columnsSet.add("complexId");
+ columnsSet.add("compartmentId");
columnsSet.add("fullName");
columnsSet.add("abbreviation");
columnsSet.add("formula");
--
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