some annotators were crashing on old installations

CHANGELOG

 minerva (14.0.5) stable; urgency=medium
   * Bug fix: copy-paste of genetic-variant data overlay into Add overlay 
     content dialog could crash upload (#1040)
+  * Bug fix: some annotators (like Cazy) were crashing on old installations 
+    (#1029)
+
+ -- Piotr Gawron <piotr.gawron@uni.lu>  Mon, 02 Dec 2019 16:00:00 +0200
 
 minerva (14.0.4) stable; urgency=high
   * Bug fix: some SBGN files uploaded to minerva could not be exported to SBML

annotation/src/test/java/lcsb/mapviewer/annotation/services/annotators/ElementAnnotatorImplementationsTest.java

 package lcsb.mapviewer.annotation.services.annotators;
 
-import static org.junit.Assert.assertEquals;
-import static org.junit.Assert.assertNotEquals;
+import static org.junit.Assert.*;
 
 import java.io.IOException;
 import java.util.*;
@@ -34,7 +33,7 @@ import lcsb.mapviewer.persist.DbUtils;
 public class ElementAnnotatorImplementationsTest extends AnnotationTestFunctions {
   static ApplicationContext applicationContext;
   @SuppressWarnings("unused")
-  private static Logger logger = LogManager.getLogger(ElementAnnotatorImplementationsTest.class);
+  private static Logger logger = LogManager.getLogger();
   @Parameter
   public String testName;
   @Parameter(1)
@@ -177,4 +176,17 @@ public class ElementAnnotatorImplementationsTest extends AnnotationTestFunctions
     }
   }
 
+  @Test
+  @Transactional
+  public void testCacheTypeExists() throws Exception {
+    ElementAnnotator annotator = applicationContext.getBean(elementAnnotator);
+    DbUtils dbUtils = applicationContext.getBean(DbUtils.class);
+    dbUtils.createSessionForCurrentThread();
+    try {
+      assertNotNull(annotator.getCacheType());
+    } finally {
+      dbUtils.closeSessionForCurrentThread();
+    }
+  }
+
 }

persist/src/main/resources/db/migration/14.0.5/V14.0.5.20191202__annotators_miss_cache_type_entries.sql

+INSERT INTO cache_type_table (validity, class_name) 
+select 365, 'lcsb.mapviewer.annotation.services.annotators.TairAnnotator' 
+where not exists (select 1 from cache_type_table where class_name = 'lcsb.mapviewer.annotation.services.annotators.TairAnnotator');
+
+INSERT INTO cache_type_table (validity, class_name) 
+select 365, 'lcsb.mapviewer.annotation.services.annotators.CazyAnnotator' 
+where not exists (select 1 from cache_type_table where class_name = 'lcsb.mapviewer.annotation.services.annotators.CazyAnnotator');
+
+INSERT INTO cache_type_table (validity, class_name) 
+select 365, 'lcsb.mapviewer.annotation.services.annotators.BrendaAnnotator' 
+where not exists (select 1 from cache_type_table where class_name = 'lcsb.mapviewer.annotation.services.annotators.BrendaAnnotator');
+
+INSERT INTO cache_type_table (validity, class_name) 
+select 365, 'lcsb.mapviewer.annotation.services.annotators.StitchAnnotator' 
+where not exists (select 1 from cache_type_table where class_name = 'lcsb.mapviewer.annotation.services.annotators.StitchAnnotator');
+
+INSERT INTO cache_type_table (validity, class_name) 
+select 365, 'lcsb.mapviewer.annotation.services.annotators.StringAnnotator' 
+where not exists (select 1 from cache_type_table where class_name = 'lcsb.mapviewer.annotation.services.annotators.StringAnnotator');