Commit df2159f4 authored by Piotr Gawron's avatar Piotr Gawron
Browse files

export of structural state should use structural state z index

parent 0023d8c1
...@@ -277,7 +277,7 @@ public class ModificationResidueExporter { ...@@ -277,7 +277,7 @@ public class ModificationResidueExporter {
double x = structuralState.getPosition().getX(); double x = structuralState.getPosition().getX();
double y = structuralState.getPosition().getY(); double y = structuralState.getPosition().getY();
BoundingBox boundingBox = new BoundingBox(); BoundingBox boundingBox = new BoundingBox();
boundingBox.setPosition(new Point(x, y, structuralState.getSpecies().getZ() + 1)); boundingBox.setPosition(new Point(x, y, structuralState.getZ()));
Dimensions dimensions = new Dimensions(); Dimensions dimensions = new Dimensions();
dimensions.setWidth(width); dimensions.setWidth(width);
dimensions.setHeight(height); dimensions.setHeight(height);
......
...@@ -536,6 +536,7 @@ public class SbmlExporterTest extends SbmlTestFunctions { ...@@ -536,6 +536,7 @@ public class SbmlExporterTest extends SbmlTestFunctions {
structuralState.setWidth(element.getWidth()); structuralState.setWidth(element.getWidth());
structuralState.setHeight(20.0); structuralState.setHeight(20.0);
structuralState.setFontSize(10.0); structuralState.setFontSize(10.0);
structuralState.setZ(element.getZ() + 2);
return structuralState; return structuralState;
} }
......
...@@ -64,6 +64,7 @@ public class SbmlModelUtilsTest { ...@@ -64,6 +64,7 @@ public class SbmlModelUtilsTest {
} }
} }
@SuppressWarnings("deprecation")
private Model createModelWithLayoutAndRender() { private Model createModelWithLayoutAndRender() {
SBMLDocument doc = new SBMLDocument(3, 1); SBMLDocument doc = new SBMLDocument(3, 1);
Model result = doc.createModel(); Model result = doc.createModel();
......
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