From d7c6fbc7070805577c5adf434c0ad5f282667219 Mon Sep 17 00:00:00 2001
From: Piotr Gawron <p.gawron@atcomp.pl>
Date: Tue, 2 Apr 2024 12:48:49 +0200
Subject: [PATCH] release notes updated
---
CHANGELOG | 117 +++++++++---------------------------------------------
1 file changed, 18 insertions(+), 99 deletions(-)
diff --git a/CHANGELOG b/CHANGELOG
index ef1639edd0..4413e723d9 100644
--- a/CHANGELOG
+++ b/CHANGELOG
@@ -1,102 +1,5 @@
-minerva (17.0.0~beta.6) unstable; urgency=medium
- * Bug fix (regression): when caching data on project upload annotation links
- were not present (#2012)
-
- -- Piotr Gawron <piotr.gawron@uni.lu> Thu, 14 Mar 2024 10:00:00 +0200
-
-minerva (17.0.0~beta.5) unstable; urgency=medium
- * Small improvement (regression): additional info about archive/revive
- project action (#1971)
- * Small improvement: when minerva shutdowns unexpectedly try to restart
- minerva for at most 3 times within 10 minutes (#2009)
- * Bug fix (regression): orcid id can have 'X' in the last position (#1991)
- * Bug fix (regression): orcid id should be unique only for non-empty strings
- (#2005)
- * Bug fix (regression): logout caused a lot of error logs in the server
- (#1999)
- * Bug fix (regression): when there is an issue with postgres (restart of
- database/maintenance) try to recover broken connections (#2009)
-
- -- Piotr Gawron <piotr.gawron@uni.lu> Thu, 22 Feb 2024 17:00:00 +0200
-
-minerva (17.0.0~beta.4) unstable; urgency=medium
- * Small improvement: revive/archive project button moved to edit project
- dialog (#1971)
- * Bug fix (regression): activating user without email produced an error
- * Bug fix (regression): orcid validation did not accept empty string which
- was breaking update of a user (#1991, #1973, #2001)
- * Bug fix (regression): SIGN UP button was visible even when it was not
- possible (#1635)
- * Bug fix (regression): orcid validation error provides proper message
- (#1991, #2000)
- * Bug fix (regression): update of project upload status did not appear in
- the admin panel (#1992)
-
- -- Piotr Gawron <piotr.gawron@uni.lu> Thu, 15 Feb 2024 17:00:00 +0200
-
-minerva (17.0.0~beta.3) unstable; urgency=medium
- * Small improvement: orcid validation added (#1991)
- * Small improvement: JAVA_ARGS in /etc/minerva/minerva.properties are used
- when starting minerva (#1988)
- * Bug fix (regression): debian/ubuntu upgrade from upgraded version from 16.4
- was not working properly - apt-get install was failing (#1985)
- * Bug fix (regression): authentication session cookie was incidentally renamed
- to JSESSIONID - it's back MINERVA_AUTH_TOKEN (#1984)
- * Bug fix: HGNC changed url format - all identifiers.org links must be
- refreshed (#1696)
- * Bug fix: (regression) sending email when activating user caused issues
- (#1973)
- * Bug fix: Sign up is visible everywhere in minerva where user can login.
- When signup is visible request an account is invisible (#1635)
- * Bug fix: (regression) cache refresh did not work in production (#1989)
- * Bug fix: (regression) pending create project jobs were blocking start of
- minerva application (#1986)
- * Bug fix: (regression) uploading project produces a lot of errors like:
- Problem with checking property:
- private final byte java.lang.String.coder (#1983)
- * Bug fix: (regression) API docs did not contain generated content (#1983)
- * Bug fix: when browsing map without background guest user was able to click
- add overlay button (#1990)
- * Bug fix: invalid columns were marked as sortable in user list panel (#1993)
-
- -- Piotr Gawron <piotr.gawron@uni.lu> Thu, 15 Feb 2024 15:00:00 +0200
-
-minerva (17.0.0~beta.2) unstable; urgency=medium
- * Bug fix (regression): minerva was very slow in production due to cache
- issue (#1987)
-
- -- Piotr Gawron <piotr.gawron@uni.lu> Fri, 09 Feb 2024 15:00:00 +0200
-
-minerva (17.0.0~beta.1) unstable; urgency=medium
- * Bug fix (regression): problem with sending emails caused issues when
- uploading new project (#1976), updating user info (#1970, #1973)
- * Bug fix (regression): orcid login redirect was invalid (#1923)
- * Bug fix (regression): link to API docs did not work (#1975)
- * Bug fix (regression): static files should be accessed using
- domain.name/minerva/resources/ instead of domain.name/resources/ (#1963)
- * Bug fix (regression): updating own data/new user data in admin panel made
- account disabled (#1635)
- * Bug fix (regression): accepting ToS was impossible (#1974)
- * Bug fix (regression): export page did not work (#1965)
- * Bug fix: refresh of DAPI data did not work properly (#1967)
- * Bug fix: download genomes stopped working (http://hgdownload.cse.ucsc.edu/
- is down)
- * Bug fix: upload of invalid javascript plugin was throwing exception
- (#1964)
- * Bug fix: UCSC changed the way that data is accessed and genomic download
- stopped working (#1979)
- * Bug fix (regression): when queue handler for refresh cache had an issue
- uploading projects/ reviving projects were not handled (#1981, #1976,
- #1972)
-
- -- Piotr Gawron <piotr.gawron@uni.lu> Fri, 09 Feb 2024 12:00:00 +0200
-
-minerva (17.0.0~beta.0) unstable; urgency=medium
+minerva (17.0.0) stable; urgency=medium
* Backward incompatibility: tomcat dependency removed (#1530)
-
- -- Piotr Gawron <piotr.gawron@uni.lu> Tue, 30 Jan 2024 10:00:00 +0200
-
-minerva (17.0.0~alpha.0) unstable; urgency=medium
* Backward incompatibility: functionality of String Annotator moved to
Uniprot Annotator as they were using the same source database (#1629)
* Backward incompatibility: generating of pdf does not use itext (#1043)
@@ -132,11 +35,27 @@ minerva (17.0.0~alpha.0) unstable; urgency=medium
default in config (#1423)
* Small improvement: border width from source file (like CellDesigner) is
used when drawing elements (#1865)
+ * Small improvement: when minerva shutdowns unexpectedly try to restart
+ minerva for at most 3 times within 10 minutes (#2009)
+ * Small improvement: JAVA_ARGS in /etc/minerva/minerva.properties are used
+ when starting minerva (#1988)
* Bug fix: when importing from CellDesigner coordinates of coding region in
a gene were incorrectly computed
* Bug fix: export to SBML did not provide text label for CodingRegion and
RegulatoryRegion
* Bug fix: export as pdf map with some glyphs was broken (#1563)
+ * Bug fix: HGNC changed url format - all identifiers.org links must be
+ refreshed (#1696)
+ * Bug fix: when browsing map without background guest user was able to click
+ add overlay button (#1990)
+ * Bug fix: invalid columns were marked as sortable in user list panel (#1993)
+ * Bug fix: refresh of DAPI data did not work properly (#1967)
+ * Bug fix: download genomes stopped working (http://hgdownload.cse.ucsc.edu/
+ is down)
+ * Bug fix: upload of invalid javascript plugin was throwing exception
+ (#1964)
+ * Bug fix: UCSC changed the way that data is accessed and genomic download
+ stopped working (#1979)
* Bug fix: export to CellDesigner should not put notes in Antisense RNA,
Gene and RNA - the notes are already in Species (#1810)
* Bug fix: adding new project format *.sbml did not change Type in Add
@@ -144,7 +63,7 @@ minerva (17.0.0~alpha.0) unstable; urgency=medium
* Bug fix: reactions imported from CellDesigner and attached to the corner of
drug were misaligned (#1479)
- -- Piotr Gawron <piotr.gawron@uni.lu> Tue, 23 Jan 2024 09:00:00 +0200
+ -- Piotr Gawron <piotr.gawron@uni.lu> Tue, 02 Apr 2024 13:00:00 +0200
minerva (16.4.1) unstable; urgency=medium
* Bug fix: un-register from minerva net was impossible (#1998)
--
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