diff --git a/CHANGELOG b/CHANGELOG index 7dbbc70f8686aab69ca6600c18131af08d322183..adc0a58c82381d71a61253f46c3bceaa20648a2a 100644 --- a/CHANGELOG +++ b/CHANGELOG @@ -1,3 +1,8 @@ +minerva (17.0.0~beta.0) unstable; urgency=medium + * Backward incompatibility: tomcat dependency removed (#1530) + + -- Piotr Gawron <piotr.gawron@uni.lu> Tue, 30 Jan 2023 10:00:00 +0200 + minerva (17.0.0~alpha.0) unstable; urgency=medium * Backward incompatibility: functionality of String Annotator moved to Uniprot Annotator as they were using the same source database (#1629) diff --git a/CellDesigner-plugin/pom.xml b/CellDesigner-plugin/pom.xml index 89eb2f80f414d24e8f16c3b05a6564d4cd713809..220319336487dc26454bd3702171ab446785a01f 100644 --- a/CellDesigner-plugin/pom.xml +++ b/CellDesigner-plugin/pom.xml @@ -5,7 +5,7 @@ <parent> <groupId>lcsb.mapviewer</groupId> <artifactId>parent</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </parent> <artifactId>CellDesigner-plugin</artifactId> <!-- dependency from the MapViewer model --> @@ -50,19 +50,19 @@ <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>model</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>commons</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>converter-CellDesigner</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <dependency> diff --git a/annotation/pom.xml b/annotation/pom.xml index 5fb41bcf908e9ec818f232d109dfd9f0318779fe..cf3850ff50eb3168fc984b864591a281223c37d3 100644 --- a/annotation/pom.xml +++ b/annotation/pom.xml @@ -5,7 +5,7 @@ <parent> <groupId>lcsb.mapviewer</groupId> <artifactId>parent</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </parent> <artifactId>annotation</artifactId> <name>Annotation module</name> @@ -19,7 +19,7 @@ <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>model</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <!-- dependency from the MapViewer dao --> @@ -27,7 +27,7 @@ <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>persist</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <!-- dependency from the MapViewer cell designer parser (we need access @@ -35,13 +35,13 @@ <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>converter-CellDesigner</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>converter</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <!-- Log4J2 --> diff --git a/commons/pom.xml b/commons/pom.xml index 8d7344720e6b761c720c18b9d235e5a53ca0dfe7..7516a03496f74a94dd7dc0c852ec3f934d8255e7 100644 --- a/commons/pom.xml +++ b/commons/pom.xml @@ -5,7 +5,7 @@ <parent> <groupId>lcsb.mapviewer</groupId> <artifactId>parent</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </parent> <artifactId>commons</artifactId> <name>Mapviewer commons</name> diff --git a/converter-CellDesigner/pom.xml b/converter-CellDesigner/pom.xml index 178b8e564542a3ed204765d97b2a5a83ac2f3c21..c3b5f5974416ba8a17aeafafc01cf44c22092302 100644 --- a/converter-CellDesigner/pom.xml +++ b/converter-CellDesigner/pom.xml @@ -5,7 +5,7 @@ <parent> <groupId>lcsb.mapviewer</groupId> <artifactId>parent</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </parent> <artifactId>converter-CellDesigner</artifactId> <name>CellDesigner converter</name> @@ -17,13 +17,13 @@ <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>model</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>converter</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <!-- Log4J2 --> diff --git a/converter-SBGNML/pom.xml b/converter-SBGNML/pom.xml index a7e011a72b2c20d76082a5623698d956a1a07a57..bac246c75794b0f84ffa2ab2b123c9adfdb98e07 100644 --- a/converter-SBGNML/pom.xml +++ b/converter-SBGNML/pom.xml @@ -5,7 +5,7 @@ <parent> <groupId>lcsb.mapviewer</groupId> <artifactId>parent</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </parent> <artifactId>converter-SBGNML</artifactId> @@ -20,26 +20,26 @@ <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>model</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>persist</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> <scope>test</scope> </dependency> <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>converter-CellDesigner</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>converter-graphics</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <dependency> diff --git a/converter-graphics/pom.xml b/converter-graphics/pom.xml index 72bf038f30c2aac9c9f69f4ee745e4aff4727e4f..437d6fa00fa1cd662101a2e5fb8e890c0261e7b5 100644 --- a/converter-graphics/pom.xml +++ b/converter-graphics/pom.xml @@ -5,7 +5,7 @@ <parent> <groupId>lcsb.mapviewer</groupId> <artifactId>parent</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </parent> <artifactId>converter-graphics</artifactId> <name>MapViewer graphics converter</name> @@ -18,13 +18,13 @@ <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>model</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>model-command</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <!-- Log4J2 --> diff --git a/converter-sbml/pom.xml b/converter-sbml/pom.xml index 695ff6be62aa0ed7092e469201fd5aedadd2c3ce..f763b2b80e881b2f63e3ae2ab2ace27dd434b4d8 100644 --- a/converter-sbml/pom.xml +++ b/converter-sbml/pom.xml @@ -7,7 +7,7 @@ <parent> <groupId>lcsb.mapviewer</groupId> <artifactId>parent</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </parent> <artifactId>converter-sbml</artifactId> <name>converter-sbml</name> @@ -40,22 +40,22 @@ <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>model</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>model-command</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>converter-CellDesigner</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>converter</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <!-- Log4J2 --> @@ -167,7 +167,7 @@ <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>converter-graphics</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> <scope>test</scope> </dependency> diff --git a/converter/pom.xml b/converter/pom.xml index ce35666284aeae720583ffc4b8f33985abebfcbb..5b50f64503de34400f838fbb0081b0fbd8cb6cc4 100644 --- a/converter/pom.xml +++ b/converter/pom.xml @@ -5,7 +5,7 @@ <parent> <groupId>lcsb.mapviewer</groupId> <artifactId>parent</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </parent> <artifactId>converter</artifactId> @@ -15,7 +15,7 @@ <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>model</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <dependency> <groupId>xerces</groupId> diff --git a/frontend-js/pom.xml b/frontend-js/pom.xml index 1a3bbcdc5c1b44080043b06830ef2e48f7297d04..9b830a68bf4ccae7eda88f09b7e5806cac4f9bc4 100644 --- a/frontend-js/pom.xml +++ b/frontend-js/pom.xml @@ -7,7 +7,7 @@ <parent> <groupId>lcsb.mapviewer</groupId> <artifactId>parent</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </parent> <artifactId>frontend-js</artifactId> <name>frontend-js</name> diff --git a/model-command/pom.xml b/model-command/pom.xml index 58962c7fe0270f1fdb73782fc30df9fd30d8f193..887c6f4e35c49acf9c82d84726243c80e5b4de33 100644 --- a/model-command/pom.xml +++ b/model-command/pom.xml @@ -3,7 +3,7 @@ <parent> <groupId>lcsb.mapviewer</groupId> <artifactId>parent</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </parent> <artifactId>model-command</artifactId> <name>Model commands</name> @@ -16,7 +16,7 @@ <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>model</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> @@ -24,7 +24,7 @@ <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>converter-CellDesigner</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <!-- Log4J2--> diff --git a/model/pom.xml b/model/pom.xml index aff4807112aea0447665b4039eca81b683128b8f..4d986bb51e7645d5b90c51c4d0fd3cdd638e6a20 100644 --- a/model/pom.xml +++ b/model/pom.xml @@ -5,7 +5,7 @@ <parent> <groupId>lcsb.mapviewer</groupId> <artifactId>parent</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </parent> <artifactId>model</artifactId> <name>model MapViewer</name> @@ -15,7 +15,7 @@ <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>commons</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <!-- Java xml serialization --> diff --git a/pathvisio/pom.xml b/pathvisio/pom.xml index 87bddffa1ad792c82c06f978656e4714c5556dde..0beb4afe5780c6c2e6ec3bab31290314a988273a 100644 --- a/pathvisio/pom.xml +++ b/pathvisio/pom.xml @@ -5,7 +5,7 @@ <parent> <groupId>lcsb.mapviewer</groupId> <artifactId>parent</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </parent> <artifactId>pathvisio</artifactId> <name>Pathvisio plugin</name> @@ -77,26 +77,26 @@ <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>model</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>converter-CellDesigner</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>converter-graphics</artifactId> <scope>test</scope> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>model-command</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <!-- Log4J2 --> diff --git a/persist/pom.xml b/persist/pom.xml index 2e769988bc78212ce8a4ac195c154762570c55d9..0abf9ef023e2dcd535ef5e021eae3c98187651b4 100644 --- a/persist/pom.xml +++ b/persist/pom.xml @@ -6,7 +6,7 @@ <parent> <groupId>lcsb.mapviewer</groupId> <artifactId>parent</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </parent> <artifactId>persist</artifactId> @@ -26,7 +26,7 @@ <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>model</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <!-- apache ftp --> diff --git a/pom.xml b/pom.xml index 7fc97b36c14ef6212b7b9ad66a05ad2e0da9c2ee..0cdf43baa30ae40ccda8c601f8cfe4a4dc31544f 100644 --- a/pom.xml +++ b/pom.xml @@ -6,7 +6,7 @@ <groupId>lcsb.mapviewer</groupId> <artifactId>parent</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> <packaging>pom</packaging> <name>parent MapViewer</name> diff --git a/rest-api/pom.xml b/rest-api/pom.xml index ba9232bcfb3b49070d99711172d4fe4c31af74a2..5403c5dfd1bc8ab38688b69c69bb7f110342a999 100644 --- a/rest-api/pom.xml +++ b/rest-api/pom.xml @@ -7,7 +7,7 @@ <parent> <groupId>lcsb.mapviewer</groupId> <artifactId>parent</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </parent> <artifactId>rest-api</artifactId> <name>rest-api</name> @@ -19,19 +19,19 @@ <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>model</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>service</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>pathvisio</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <dependency> diff --git a/service/pom.xml b/service/pom.xml index 26fccc273e4482727cd3fb44ee2f2440398a1501..602aacd9e4388cbdf64f7edc92c45ff9bcdfa101 100644 --- a/service/pom.xml +++ b/service/pom.xml @@ -7,7 +7,7 @@ <parent> <groupId>lcsb.mapviewer</groupId> <artifactId>parent</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </parent> <artifactId>service</artifactId> @@ -20,7 +20,7 @@ <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>model</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <!-- dependency from the MapViewer dao --> @@ -28,47 +28,47 @@ <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>persist</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>model-command</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>annotation</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <!-- dependency from the MapViewer cell designer parser --> <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>converter-CellDesigner</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <!-- dependency from the MapViewer SBGN-ML parser --> <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>converter-SBGNML</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <!-- dependency from the MapViewer graphics converter --> <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>converter-graphics</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <!-- dependency from the SBML parser --> <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>converter-sbml</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <!-- Log4J2 --> diff --git a/web/pom.xml b/web/pom.xml index 06f8f44f61c07f763a71fd416e6f1920d4070f84..7e37e4093adf5d075c174a85136ff10675883258 100644 --- a/web/pom.xml +++ b/web/pom.xml @@ -6,7 +6,7 @@ <parent> <groupId>lcsb.mapviewer</groupId> <artifactId>parent</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </parent> <artifactId>web</artifactId> <packaging>jar</packaging> @@ -36,19 +36,19 @@ <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>service</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>rest-api</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <dependency> <groupId>lcsb.mapviewer</groupId> <artifactId>frontend-js</artifactId> - <version>17.0.0~alpha.0</version> + <version>17.0.0~beta.0</version> </dependency> <dependency>