From bb9b51a5a09d672b59ab6738d2faf7bc2b58e128 Mon Sep 17 00:00:00 2001
From: Piotr Gawron <piotr.gawron@uni.lu>
Date: Fri, 16 Nov 2018 16:39:58 +0100
Subject: [PATCH] version of minerva added; layout contains proper sbml
identifier
---
.../lcsb/mapviewer/converter/model/sbml/SbmlExporter.java | 4 +++-
1 file changed, 3 insertions(+), 1 deletion(-)
diff --git a/converter-sbml/src/main/java/lcsb/mapviewer/converter/model/sbml/SbmlExporter.java b/converter-sbml/src/main/java/lcsb/mapviewer/converter/model/sbml/SbmlExporter.java
index e8129d4803..c3461c3d7d 100644
--- a/converter-sbml/src/main/java/lcsb/mapviewer/converter/model/sbml/SbmlExporter.java
+++ b/converter-sbml/src/main/java/lcsb/mapviewer/converter/model/sbml/SbmlExporter.java
@@ -16,6 +16,7 @@ import org.sbml.jsbml.ext.layout.LayoutModelPlugin;
import org.sbml.jsbml.ext.render.GlobalRenderInformation;
import org.sbml.jsbml.ext.render.RenderLayoutPlugin;
+import lcsb.mapviewer.common.Configuration;
import lcsb.mapviewer.common.exception.InvalidStateException;
import lcsb.mapviewer.converter.model.sbml.reaction.SbmlReactionExporter;
import lcsb.mapviewer.converter.model.sbml.species.SbmlSpeciesExporter;
@@ -51,7 +52,7 @@ public class SbmlExporter {
functionExporter.exportFunction(result);
ByteArrayOutputStream stream = new ByteArrayOutputStream();
- SBMLWriter.write(doc, stream, "minerva", "1.0");
+ SBMLWriter.write(doc, stream, "minerva", Configuration.getSystemVersion(null));
return stream.toString("UTF-8");
} catch (UnsupportedEncodingException e) {
throw new InvalidStateException(e);
@@ -61,6 +62,7 @@ public class SbmlExporter {
public Layout createSbmlLayout(lcsb.mapviewer.model.map.model.Model model, Model result) {
LayoutModelPlugin layoutPlugin = new LayoutModelPlugin(result);
Layout layout = new Layout();
+ layout.setId("minerva_layout");
Dimensions dimensions = new Dimensions();
if (model.getHeight() != null) {
dimensions.setHeight(model.getHeight());
--
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