diff --git a/frontend-js/.gitignore b/frontend-js/.gitignore
index eef491a6e6a25222dfd100787c3070383f8aff54..85bf40db478d89c911f8510b7155e5ab80276110 100644
--- a/frontend-js/.gitignore
+++ b/frontend-js/.gitignore
@@ -8,5 +8,4 @@
/dist/
/coverage/
/node_modules/
-/npm-debug.log
diff --git a/frontend-js/.idea/frontend-js.iml b/frontend-js/.idea/frontend-js.iml
index 45dbf88f6539d78ee4888ab62c2e63d304225ec4..cdcb3bc4b9cf2b569855cdaa6dbf703a67c7839b 100644
--- a/frontend-js/.idea/frontend-js.iml
+++ b/frontend-js/.idea/frontend-js.iml
@@ -15,11 +15,11 @@
<orderEntry type="sourceFolder" forTests="false" />
<orderEntry type="library" name="chai-DefinitelyTyped" level="application" />
<orderEntry type="library" name="js-cookie-DefinitelyTyped" level="application" />
- <orderEntry type="library" name="bluebird-DefinitelyTyped" level="application" />
<orderEntry type="library" name="mocha-DefinitelyTyped" level="application" />
<orderEntry type="library" name="jQuery UI-1.10.2" level="application" />
<orderEntry type="library" name="jQuery-2.0.0" level="application" />
<orderEntry type="library" name="datatables.net-DefinitelyTyped" level="application" />
<orderEntry type="library" name="request-DefinitelyTyped" level="application" />
+ <orderEntry type="library" name="@types/ol" level="application" />
</component>
</module>
\ No newline at end of file
diff --git a/frontend-js/package-lock.json b/frontend-js/package-lock.json
index d84bc1074518cb44283e90e34d2b94f587814a5d..81ae36632aa5c756eaaa5ca5861b7ac6273b579f 100644
--- a/frontend-js/package-lock.json
+++ b/frontend-js/package-lock.json
@@ -4,12 +4,6 @@
"lockfileVersion": 1,
"requires": true,
"dependencies": {
- "@types/node": {
- "version": "6.0.88",
- "resolved": "https://registry.npmjs.org/@types/node/-/node-6.0.88.tgz",
- "integrity": "sha512-bYDPZTX0/s1aihdjLuAgogUAT5M+TpoWChEMea2p0yOcfn5bu3k6cJb9cp6nw268XeSNIGGr+4+/8V5K6BGzLQ==",
- "dev": true
- },
"@types/react": {
"version": "15.6.15",
"resolved": "https://registry.npmjs.org/@types/react/-/react-15.6.15.tgz",
@@ -35,24 +29,6 @@
"through": "2.3.8"
}
},
- "MolStar": {
- "version": "git://github.com/davidhoksza/MolStar.git#702c7417cd3dffdb45554b54ce49e27bc881b109",
- "dev": true,
- "requires": {
- "ProtVista": "git://github.com/davidhoksza/protvista.git#4e4bb737ba1e183291505bd25f8bae2e651ce21e",
- "downloadjs": "1.4.7",
- "jquery": "3.3.1",
- "litemol": "github:dsehnal/LiteMol#67556b0de0d2428f9494136758cbf8a662f66412"
- },
- "dependencies": {
- "jquery": {
- "version": "3.3.1",
- "resolved": "https://registry.npmjs.org/jquery/-/jquery-3.3.1.tgz",
- "integrity": "sha512-Ubldcmxp5np52/ENotGxlLe6aGMvmF4R8S6tZjsP6Knsaxd/xp3Zrh50cG93lR6nPXyUFwzN3ZSOQI0wRJNdGg==",
- "dev": true
- }
- }
- },
"ProtVista": {
"version": "git://github.com/davidhoksza/protvista.git#4e4bb737ba1e183291505bd25f8bae2e651ce21e",
"dev": true,
@@ -73,16 +49,39 @@
}
},
"abab": {
- "version": "1.0.3",
- "resolved": "https://registry.npmjs.org/abab/-/abab-1.0.3.tgz",
- "integrity": "sha1-uB3l9ydOxOdW15fNg08wNkJyTl0=",
+ "version": "1.0.4",
+ "resolved": "https://registry.npmjs.org/abab/-/abab-1.0.4.tgz",
+ "integrity": "sha1-X6rZwsB/YN12dw9xzwJbYqY8/U4=",
"dev": true
},
"abbrev": {
"version": "1.0.9",
"resolved": "https://registry.npmjs.org/abbrev/-/abbrev-1.0.9.tgz",
- "integrity": "sha1-kbR5JYinc4wl813W9jdSovh3YTU=",
- "dev": true
+ "integrity": "sha1-kbR5JYinc4wl813W9jdSovh3YTU="
+ },
+ "accepts": {
+ "version": "1.3.5",
+ "resolved": "https://registry.npmjs.org/accepts/-/accepts-1.3.5.tgz",
+ "integrity": "sha1-63d99gEXI6OxTopywIBcjoZ0a9I=",
+ "requires": {
+ "mime-types": "2.1.18",
+ "negotiator": "0.6.1"
+ },
+ "dependencies": {
+ "mime-db": {
+ "version": "1.33.0",
+ "resolved": "https://registry.npmjs.org/mime-db/-/mime-db-1.33.0.tgz",
+ "integrity": "sha512-BHJ/EKruNIqJf/QahvxwQZXKygOQ256myeN/Ew+THcAa5q+PjyTTMMeNQC4DZw5AwfvelsUrA6B67NKMqXDbzQ=="
+ },
+ "mime-types": {
+ "version": "2.1.18",
+ "resolved": "https://registry.npmjs.org/mime-types/-/mime-types-2.1.18.tgz",
+ "integrity": "sha512-lc/aahn+t4/SWV/qcmumYjymLsWfN3ELhpmVuUFjgsORruuZPVSwAQryq+HHGvO/SI2KVX26bx+En+zhM8g8hQ==",
+ "requires": {
+ "mime-db": "1.33.0"
+ }
+ }
+ }
},
"acorn": {
"version": "4.0.13",
@@ -90,14 +89,27 @@
"integrity": "sha1-EFSVrlNh1pe9GVyCUZLhrX8lN4c="
},
"acorn-globals": {
- "version": "3.1.0",
- "resolved": "https://registry.npmjs.org/acorn-globals/-/acorn-globals-3.1.0.tgz",
- "integrity": "sha1-/YJw9x+7SZawBPqIDuXUZXOnMb8=",
+ "version": "4.1.0",
+ "resolved": "https://registry.npmjs.org/acorn-globals/-/acorn-globals-4.1.0.tgz",
+ "integrity": "sha512-KjZwU26uG3u6eZcfGbTULzFcsoz6pegNKtHPksZPOUsiKo5bUmiBPa38FuHZ/Eun+XYh/JCCkS9AS3Lu4McQOQ==",
"dev": true,
"requires": {
- "acorn": "4.0.13"
+ "acorn": "5.5.3"
+ },
+ "dependencies": {
+ "acorn": {
+ "version": "5.5.3",
+ "resolved": "https://registry.npmjs.org/acorn/-/acorn-5.5.3.tgz",
+ "integrity": "sha512-jd5MkIUlbbmb07nXH0DT3y7rDVtkzDi4XZOUVWAer8ajmF/DTSSbl5oNFyDOl/OXA33Bl79+ypHhl2pN20VeOQ==",
+ "dev": true
+ }
}
},
+ "after": {
+ "version": "0.8.2",
+ "resolved": "https://registry.npmjs.org/after/-/after-0.8.2.tgz",
+ "integrity": "sha1-/ts5T58OAqqXaOcCvaI7UF+ufh8="
+ },
"ajv": {
"version": "5.2.3",
"resolved": "https://registry.npmjs.org/ajv/-/ajv-5.2.3.tgz",
@@ -113,7 +125,6 @@
"version": "0.1.4",
"resolved": "https://registry.npmjs.org/align-text/-/align-text-0.1.4.tgz",
"integrity": "sha1-DNkKVhCT810KmSVsIrcGlDP60Rc=",
- "dev": true,
"requires": {
"kind-of": "3.2.2",
"longest": "1.0.1",
@@ -125,6 +136,64 @@
"resolved": "https://registry.npmjs.org/amdefine/-/amdefine-1.0.1.tgz",
"integrity": "sha1-SlKCrBZHKek2Gbz9OtFR+BfOkfU="
},
+ "ansi-regex": {
+ "version": "2.1.1",
+ "resolved": "https://registry.npmjs.org/ansi-regex/-/ansi-regex-2.1.1.tgz",
+ "integrity": "sha1-w7M6te42DYbg5ijwRorn7yfWVN8="
+ },
+ "ansi-styles": {
+ "version": "1.0.0",
+ "resolved": "https://registry.npmjs.org/ansi-styles/-/ansi-styles-1.0.0.tgz",
+ "integrity": "sha1-yxAt8cVvUSPquLZ817mAJ6AnkXg="
+ },
+ "aproba": {
+ "version": "1.2.0",
+ "resolved": "https://registry.npmjs.org/aproba/-/aproba-1.2.0.tgz",
+ "integrity": "sha512-Y9J6ZjXtoYh8RnXVCMOU/ttDmk1aBjunq9vO0ta5x85WDQiQfUF9sIPBITdbiiIVcBo03Hi3jMxigBtsddlXRw=="
+ },
+ "are-we-there-yet": {
+ "version": "1.1.4",
+ "resolved": "https://registry.npmjs.org/are-we-there-yet/-/are-we-there-yet-1.1.4.tgz",
+ "integrity": "sha1-u13KOCu5TwXhUZQ3PRb9O6HKEQ0=",
+ "requires": {
+ "delegates": "1.0.0",
+ "readable-stream": "2.3.6"
+ },
+ "dependencies": {
+ "isarray": {
+ "version": "1.0.0",
+ "resolved": "https://registry.npmjs.org/isarray/-/isarray-1.0.0.tgz",
+ "integrity": "sha1-u5NdSFgsuhaMBoNJV6VKPgcSTxE="
+ },
+ "process-nextick-args": {
+ "version": "2.0.0",
+ "resolved": "https://registry.npmjs.org/process-nextick-args/-/process-nextick-args-2.0.0.tgz",
+ "integrity": "sha512-MtEC1TqN0EU5nephaJ4rAtThHtC86dNN9qCuEhtshvpVBkAW5ZO7BASN9REnF9eoXGcRub+pFuKEpOHE+HbEMw=="
+ },
+ "readable-stream": {
+ "version": "2.3.6",
+ "resolved": "https://registry.npmjs.org/readable-stream/-/readable-stream-2.3.6.tgz",
+ "integrity": "sha512-tQtKA9WIAhBF3+VLAseyMqZeBjW0AHJoxOtYqSUZNJxauErmLbVm2FW1y+J/YA9dUrAC39ITejlZWhVIwawkKw==",
+ "requires": {
+ "core-util-is": "1.0.2",
+ "inherits": "2.0.3",
+ "isarray": "1.0.0",
+ "process-nextick-args": "2.0.0",
+ "safe-buffer": "5.1.1",
+ "string_decoder": "1.1.1",
+ "util-deprecate": "1.0.2"
+ }
+ },
+ "string_decoder": {
+ "version": "1.1.1",
+ "resolved": "https://registry.npmjs.org/string_decoder/-/string_decoder-1.1.1.tgz",
+ "integrity": "sha512-n/ShnvDi6FHbbVfviro+WojiFzv+s8MPMHBczVePfUpDJLwoLT0ht1l4YwBCbi8pJAveEEdnkHyPyTP/mzRfwg==",
+ "requires": {
+ "safe-buffer": "5.1.1"
+ }
+ }
+ }
+ },
"argparse": {
"version": "1.0.9",
"resolved": "https://registry.npmjs.org/argparse/-/argparse-1.0.9.tgz",
@@ -134,6 +203,19 @@
"sprintf-js": "1.0.3"
}
},
+ "arr-diff": {
+ "version": "2.0.0",
+ "resolved": "https://registry.npmjs.org/arr-diff/-/arr-diff-2.0.0.tgz",
+ "integrity": "sha1-jzuCf5Vai9ZpaX5KQlasPOrjVs8=",
+ "requires": {
+ "arr-flatten": "1.1.0"
+ }
+ },
+ "arr-flatten": {
+ "version": "1.1.0",
+ "resolved": "https://registry.npmjs.org/arr-flatten/-/arr-flatten-1.1.0.tgz",
+ "integrity": "sha512-L3hKV5R/p5o81R7O02IGnwpDmkp6E982XhtbuwSe3O4qOtMMMtodicASA1Cny2U+aCXcNpml+m4dPsvsJ3jatg=="
+ },
"array-equal": {
"version": "1.0.0",
"resolved": "https://registry.npmjs.org/array-equal/-/array-equal-1.0.0.tgz",
@@ -173,6 +255,16 @@
"integrity": "sha1-r2rId6Jcx/dOBYiUdThY39sk/bY=",
"dev": true
},
+ "array-unique": {
+ "version": "0.2.1",
+ "resolved": "https://registry.npmjs.org/array-unique/-/array-unique-0.2.1.tgz",
+ "integrity": "sha1-odl8yvy8JiXMcPrc6zalDFiwGlM="
+ },
+ "arraybuffer.slice": {
+ "version": "0.0.7",
+ "resolved": "https://registry.npmjs.org/arraybuffer.slice/-/arraybuffer.slice-0.0.7.tgz",
+ "integrity": "sha512-wGUIVQXuehL5TCqQun8OW81jGzAWycqzFF8lFp+GOM5BXLYj3bKNsYC4daB7n6XjCqxQA/qgTJ+8ANR3acjrog=="
+ },
"asap": {
"version": "2.0.6",
"resolved": "https://registry.npmjs.org/asap/-/asap-2.0.6.tgz",
@@ -234,6 +326,11 @@
"integrity": "sha1-7GphrlZIDAw8skHJVhjiCJL5Zyo=",
"dev": true
},
+ "async-limiter": {
+ "version": "1.0.0",
+ "resolved": "https://registry.npmjs.org/async-limiter/-/async-limiter-1.0.0.tgz",
+ "integrity": "sha512-jp/uFnooOiO+L211eZOoSyzpOITMXx1rBITauYykG3BRYPu8h0UcxsPNB04RR5vo4Tyz3+ay17tR6JVf9qzYWg=="
+ },
"asynckit": {
"version": "0.4.0",
"resolved": "https://registry.npmjs.org/asynckit/-/asynckit-0.4.0.tgz",
@@ -249,6 +346,11 @@
"resolved": "https://registry.npmjs.org/aws4/-/aws4-1.6.0.tgz",
"integrity": "sha1-g+9cqGCysy5KDe7e6MdxudtXRx4="
},
+ "babylon": {
+ "version": "7.0.0-beta.19",
+ "resolved": "https://registry.npmjs.org/babylon/-/babylon-7.0.0-beta.19.tgz",
+ "integrity": "sha512-Vg0C9s/REX6/WIXN37UKpv5ZhRi6A4pjHlpkE34+8/a6c2W1Q692n3hmc+SZG5lKRnaExLUbxtJ1SVT+KaCQ/A=="
+ },
"backbone": {
"version": "1.1.2",
"resolved": "https://registry.npmjs.org/backbone/-/backbone-1.1.2.tgz",
@@ -257,6 +359,11 @@
"underscore": "1.8.3"
}
},
+ "backo2": {
+ "version": "1.0.2",
+ "resolved": "https://registry.npmjs.org/backo2/-/backo2-1.0.2.tgz",
+ "integrity": "sha1-MasayLEpNjRj41s+u2n038+6eUc="
+ },
"balanced-match": {
"version": "1.0.0",
"resolved": "https://registry.npmjs.org/balanced-match/-/balanced-match-1.0.0.tgz",
@@ -267,12 +374,22 @@
"resolved": "https://registry.npmjs.org/base62/-/base62-1.2.0.tgz",
"integrity": "sha1-MeflYNyEbJ9EwaUx32UU2jVHQVc="
},
+ "base64-arraybuffer": {
+ "version": "0.1.5",
+ "resolved": "https://registry.npmjs.org/base64-arraybuffer/-/base64-arraybuffer-0.1.5.tgz",
+ "integrity": "sha1-c5JncZI7Whl0etZmqlzUv5xunOg="
+ },
"base64-js": {
"version": "1.2.1",
"resolved": "https://registry.npmjs.org/base64-js/-/base64-js-1.2.1.tgz",
"integrity": "sha512-dwVUVIXsBZXwTuwnXI9RK8sBmgq09NDHzyR9SAph9eqk76gKK2JSQmZARC2zRC81JC2QTtxD0ARU5qTS25gIGw==",
"dev": true
},
+ "base64id": {
+ "version": "1.0.0",
+ "resolved": "https://registry.npmjs.org/base64id/-/base64id-1.0.0.tgz",
+ "integrity": "sha1-R2iMuZu2gE8OBtPnY7HDLlfY5rY="
+ },
"bcrypt-pbkdf": {
"version": "1.0.1",
"resolved": "https://registry.npmjs.org/bcrypt-pbkdf/-/bcrypt-pbkdf-1.0.1.tgz",
@@ -282,11 +399,32 @@
"tweetnacl": "0.14.5"
}
},
+ "better-assert": {
+ "version": "1.0.2",
+ "resolved": "https://registry.npmjs.org/better-assert/-/better-assert-1.0.2.tgz",
+ "integrity": "sha1-QIZrnhueC1W0gYlDEeaPr/rrxSI=",
+ "requires": {
+ "callsite": "1.0.0"
+ }
+ },
+ "binary": {
+ "version": "0.3.0",
+ "resolved": "https://registry.npmjs.org/binary/-/binary-0.3.0.tgz",
+ "integrity": "sha1-n2BVO8XOjDOG87VTz/R0Yq3sqnk=",
+ "requires": {
+ "buffers": "0.1.1",
+ "chainsaw": "0.1.0"
+ }
+ },
+ "blob": {
+ "version": "0.0.4",
+ "resolved": "https://registry.npmjs.org/blob/-/blob-0.0.4.tgz",
+ "integrity": "sha1-vPEwUspURj8w+fx+lbmkdjCpSSE="
+ },
"bluebird": {
"version": "3.5.0",
"resolved": "https://registry.npmjs.org/bluebird/-/bluebird-3.5.0.tgz",
- "integrity": "sha1-eRQg1/VR7qKJdFOop3ZT+WYG1nw=",
- "dev": true
+ "integrity": "sha1-eRQg1/VR7qKJdFOop3ZT+WYG1nw="
},
"bn.js": {
"version": "4.11.8",
@@ -317,6 +455,16 @@
"concat-map": "0.0.1"
}
},
+ "braces": {
+ "version": "1.8.5",
+ "resolved": "https://registry.npmjs.org/braces/-/braces-1.8.5.tgz",
+ "integrity": "sha1-uneWLhLf+WnWt2cR6RS3N4V79qc=",
+ "requires": {
+ "expand-range": "1.8.2",
+ "preserve": "0.2.0",
+ "repeat-element": "1.1.2"
+ }
+ },
"brorand": {
"version": "1.1.0",
"resolved": "https://registry.npmjs.org/brorand/-/brorand-1.1.0.tgz",
@@ -336,6 +484,12 @@
"umd": "3.0.1"
}
},
+ "browser-process-hrtime": {
+ "version": "0.1.2",
+ "resolved": "https://registry.npmjs.org/browser-process-hrtime/-/browser-process-hrtime-0.1.2.tgz",
+ "integrity": "sha1-Ql1opY00R/AqBKqJQYf86K+Le44=",
+ "dev": true
+ },
"browser-resolve": {
"version": "1.11.2",
"resolved": "https://registry.npmjs.org/browser-resolve/-/browser-resolve-1.11.2.tgz",
@@ -543,6 +697,16 @@
"integrity": "sha1-JuYe0UIvtw3ULm42cp7VHYVf6Nk=",
"dev": true
},
+ "buffers": {
+ "version": "0.1.1",
+ "resolved": "https://registry.npmjs.org/buffers/-/buffers-0.1.1.tgz",
+ "integrity": "sha1-skV5w77U1tOWru5tmorn9Ugqt7s="
+ },
+ "builtin-modules": {
+ "version": "2.0.0",
+ "resolved": "https://registry.npmjs.org/builtin-modules/-/builtin-modules-2.0.0.tgz",
+ "integrity": "sha512-3U5kUA5VPsRUA3nofm/BXX7GVHKfxz0hOBAPxXrIvHzlDRkQVqEn6yi8QJegxl4LzOHLdvb7XF5dVawa/VVYBg=="
+ },
"builtin-status-codes": {
"version": "3.0.0",
"resolved": "https://registry.npmjs.org/builtin-status-codes/-/builtin-status-codes-3.0.0.tgz",
@@ -555,11 +719,15 @@
"integrity": "sha1-0JxLUoAKpMB44t2BqGmqyQ0uVOc=",
"dev": true
},
+ "callsite": {
+ "version": "1.0.0",
+ "resolved": "https://registry.npmjs.org/callsite/-/callsite-1.0.0.tgz",
+ "integrity": "sha1-KAOY5dZkvXQDi28JBRU+borxvCA="
+ },
"camelcase": {
"version": "1.2.1",
"resolved": "https://registry.npmjs.org/camelcase/-/camelcase-1.2.1.tgz",
"integrity": "sha1-m7UwTS4LVmmLLHWLCKPqqdqlijk=",
- "dev": true,
"optional": true
},
"caseless": {
@@ -567,11 +735,18 @@
"resolved": "https://registry.npmjs.org/caseless/-/caseless-0.12.0.tgz",
"integrity": "sha1-G2gcIf+EAzyCZUMJBolCDRhxUdw="
},
+ "catharsis": {
+ "version": "0.8.9",
+ "resolved": "https://registry.npmjs.org/catharsis/-/catharsis-0.8.9.tgz",
+ "integrity": "sha1-mMyJDKZS3S7w5ws3klMQ/56Q/Is=",
+ "requires": {
+ "underscore-contrib": "0.3.0"
+ }
+ },
"center-align": {
"version": "0.1.3",
"resolved": "https://registry.npmjs.org/center-align/-/center-align-0.1.3.tgz",
"integrity": "sha1-qg0yYptu6XIgBBHL1EYckHvCt60=",
- "dev": true,
"optional": true,
"requires": {
"align-text": "0.1.4",
@@ -589,6 +764,24 @@
"type-detect": "1.0.0"
}
},
+ "chainsaw": {
+ "version": "0.1.0",
+ "resolved": "https://registry.npmjs.org/chainsaw/-/chainsaw-0.1.0.tgz",
+ "integrity": "sha1-XqtQsor+WAdNDVgpE4iCi15fvJg=",
+ "requires": {
+ "traverse": "0.3.9"
+ }
+ },
+ "chalk": {
+ "version": "0.4.0",
+ "resolved": "https://registry.npmjs.org/chalk/-/chalk-0.4.0.tgz",
+ "integrity": "sha1-UZmj3c0MHv4jvAjBsCewYXbgxk8=",
+ "requires": {
+ "ansi-styles": "1.0.0",
+ "has-color": "0.1.7",
+ "strip-ansi": "0.1.1"
+ }
+ },
"cipher-base": {
"version": "1.0.4",
"resolved": "https://registry.npmjs.org/cipher-base/-/cipher-base-1.0.4.tgz",
@@ -641,7 +834,6 @@
"version": "2.1.0",
"resolved": "https://registry.npmjs.org/cliui/-/cliui-2.1.0.tgz",
"integrity": "sha1-S0dXYP+AJkx2LDoXGQMukcf+oNE=",
- "dev": true,
"optional": true,
"requires": {
"center-align": "0.1.3",
@@ -653,16 +845,95 @@
"version": "0.0.2",
"resolved": "https://registry.npmjs.org/wordwrap/-/wordwrap-0.0.2.tgz",
"integrity": "sha1-t5Zpu0LstAn4PVg8rVLKF+qhZD8=",
- "dev": true,
"optional": true
}
}
},
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@@ -2979,6 +4480,11 @@
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+ "resolved": "https://registry.npmjs.org/string-width/-/string-width-1.0.2.tgz",
+ "integrity": "sha1-EYvfW4zcUaKn5w0hHgfisLmxB9M=",
+ "requires": {
+ "code-point-at": "1.1.0",
+ "is-fullwidth-code-point": "1.0.0",
+ "strip-ansi": "3.0.1"
+ },
+ "dependencies": {
+ "strip-ansi": {
+ "version": "3.0.1",
+ "resolved": "https://registry.npmjs.org/strip-ansi/-/strip-ansi-3.0.1.tgz",
+ "integrity": "sha1-ajhfuIU9lS1f8F0Oiq+UJ43GPc8=",
+ "requires": {
+ "ansi-regex": "2.1.1"
+ }
+ }
+ }
+ },
"string_decoder": {
"version": "0.10.31",
"resolved": "https://registry.npmjs.org/string_decoder/-/string_decoder-0.10.31.tgz",
@@ -3166,6 +4692,11 @@
"resolved": "https://registry.npmjs.org/stringstream/-/stringstream-0.0.5.tgz",
"integrity": "sha1-TkhM1N5aC7vuGORjB3EKioFiGHg="
},
+ "strip-ansi": {
+ "version": "0.1.1",
+ "resolved": "https://registry.npmjs.org/strip-ansi/-/strip-ansi-0.1.1.tgz",
+ "integrity": "sha1-OeipjQRNFQZgq+SmgIrPcLt7yZE="
+ },
"strip-json-comments": {
"version": "1.0.4",
"resolved": "https://registry.npmjs.org/strip-json-comments/-/strip-json-comments-1.0.4.tgz",
@@ -3213,11 +4744,48 @@
"acorn": "4.0.13"
}
},
+ "taffydb": {
+ "version": "2.6.2",
+ "resolved": "https://registry.npmjs.org/taffydb/-/taffydb-2.6.2.tgz",
+ "integrity": "sha1-fLy2S1oUG2ou/CxdLGe04VCyomg="
+ },
+ "tar": {
+ "version": "3.1.5",
+ "resolved": "https://registry.npmjs.org/tar/-/tar-3.1.5.tgz",
+ "integrity": "sha512-TKJKz1fqBOZBaIQ/MGRKU0EnTGmKMLy4ReTRgP10AgtfOWBbj9PBg4MgY80GFpqGbs2EzcIctW5gbwbP4woDYg==",
+ "requires": {
+ "minipass": "2.2.4",
+ "minizlib": "1.1.0",
+ "mkdirp": "0.5.1",
+ "yallist": "3.0.2"
+ }
+ },
+ "temp": {
+ "version": "0.8.3",
+ "resolved": "https://registry.npmjs.org/temp/-/temp-0.8.3.tgz",
+ "integrity": "sha1-4Ma8TSa5AxJEEOT+2BEDAU38H1k=",
+ "requires": {
+ "os-tmpdir": "1.0.2",
+ "rimraf": "2.2.8"
+ },
+ "dependencies": {
+ "rimraf": {
+ "version": "2.2.8",
+ "resolved": "https://registry.npmjs.org/rimraf/-/rimraf-2.2.8.tgz",
+ "integrity": "sha1-5Dm+Kq7jJzIZUnMPmaiSnk/FBYI="
+ }
+ }
+ },
"text-encoding": {
"version": "0.6.4",
"resolved": "https://registry.npmjs.org/text-encoding/-/text-encoding-0.6.4.tgz",
"integrity": "sha1-45mpgiV6J22uQou5KEXLcb3CbRk="
},
+ "throttleit": {
+ "version": "1.0.0",
+ "resolved": "https://registry.npmjs.org/throttleit/-/throttleit-1.0.0.tgz",
+ "integrity": "sha1-nnhYNtr0Z0MUWlmEtiaNgoUorGw="
+ },
"through": {
"version": "2.3.8",
"resolved": "https://registry.npmjs.org/through/-/through-2.3.8.tgz",
@@ -3274,12 +4842,43 @@
"process": "0.11.10"
}
},
+ "tmp": {
+ "version": "0.0.31",
+ "resolved": "https://registry.npmjs.org/tmp/-/tmp-0.0.31.tgz",
+ "integrity": "sha1-jzirlDjhcxXl29izZX6L+yd65Kc=",
+ "requires": {
+ "os-tmpdir": "1.0.2"
+ }
+ },
+ "to-array": {
+ "version": "0.1.4",
+ "resolved": "https://registry.npmjs.org/to-array/-/to-array-0.1.4.tgz",
+ "integrity": "sha1-F+bBH3PdTz10zaek/zI46a2b+JA="
+ },
"to-arraybuffer": {
"version": "1.0.1",
"resolved": "https://registry.npmjs.org/to-arraybuffer/-/to-arraybuffer-1.0.1.tgz",
"integrity": "sha1-fSKbH8xjfkZsoIEYCDanqr/4P0M=",
"dev": true
},
+ "touch": {
+ "version": "0.0.3",
+ "resolved": "https://registry.npmjs.org/touch/-/touch-0.0.3.tgz",
+ "integrity": "sha1-Ua7z1ElXHU8oel2Hyci0kYGg2x0=",
+ "requires": {
+ "nopt": "1.0.10"
+ },
+ "dependencies": {
+ "nopt": {
+ "version": "1.0.10",
+ "resolved": "https://registry.npmjs.org/nopt/-/nopt-1.0.10.tgz",
+ "integrity": "sha1-bd0hvSoxQXuScn3Vhfim83YI6+4=",
+ "requires": {
+ "abbrev": "1.0.9"
+ }
+ }
+ }
+ },
"tough-cookie": {
"version": "2.3.2",
"resolved": "https://registry.npmjs.org/tough-cookie/-/tough-cookie-2.3.2.tgz",
@@ -3289,10 +4888,26 @@
}
},
"tr46": {
- "version": "0.0.3",
- "resolved": "https://registry.npmjs.org/tr46/-/tr46-0.0.3.tgz",
- "integrity": "sha1-gYT9NH2snNwYWZLzpmIuFLnZq2o=",
- "dev": true
+ "version": "1.0.1",
+ "resolved": "https://registry.npmjs.org/tr46/-/tr46-1.0.1.tgz",
+ "integrity": "sha1-qLE/1r/SSJUZZ0zN5VujaTtwbQk=",
+ "dev": true,
+ "requires": {
+ "punycode": "2.1.0"
+ },
+ "dependencies": {
+ "punycode": {
+ "version": "2.1.0",
+ "resolved": "https://registry.npmjs.org/punycode/-/punycode-2.1.0.tgz",
+ "integrity": "sha1-X4Y+3Im5bbCQdLrXlHvwkFbKTn0=",
+ "dev": true
+ }
+ }
+ },
+ "traverse": {
+ "version": "0.3.9",
+ "resolved": "https://registry.npmjs.org/traverse/-/traverse-0.3.9.tgz",
+ "integrity": "sha1-cXuPIgzAu3tE5AUUwisui7xw2Lk="
},
"tty-browserify": {
"version": "0.0.0",
@@ -3344,7 +4959,6 @@
"version": "2.8.29",
"resolved": "https://registry.npmjs.org/uglify-js/-/uglify-js-2.8.29.tgz",
"integrity": "sha1-KcVzMUgFe7Th913zW3qcty5qWd0=",
- "dev": true,
"optional": true,
"requires": {
"source-map": "0.5.7",
@@ -3356,7 +4970,6 @@
"version": "0.5.7",
"resolved": "https://registry.npmjs.org/source-map/-/source-map-0.5.7.tgz",
"integrity": "sha1-igOdLRAh0i0eoUyA2OpGi6LvP8w=",
- "dev": true,
"optional": true
}
}
@@ -3365,7 +4978,6 @@
"version": "1.0.2",
"resolved": "https://registry.npmjs.org/uglify-to-browserify/-/uglify-to-browserify-1.0.2.tgz",
"integrity": "sha1-bgkk1r2mta/jSeOabWMoUKD4grc=",
- "dev": true,
"optional": true
},
"uglifyjs": {
@@ -3374,6 +4986,11 @@
"integrity": "sha1-NEDWTgRXWViVJEGOtkHGi7kNET4=",
"dev": true
},
+ "ultron": {
+ "version": "1.1.1",
+ "resolved": "https://registry.npmjs.org/ultron/-/ultron-1.1.1.tgz",
+ "integrity": "sha512-UIEXBNeYmKptWH6z8ZnqTeS8fV74zG0/eRU9VGkpzz+LIJNs8W/zM/L+7ctCkRrgbNnnR0xxw4bKOr0cW0N0Og=="
+ },
"umd": {
"version": "3.0.1",
"resolved": "https://registry.npmjs.org/umd/-/umd-3.0.1.tgz",
@@ -3385,6 +5002,26 @@
"resolved": "https://registry.npmjs.org/underscore/-/underscore-1.8.3.tgz",
"integrity": "sha1-Tz+1OxBuYJf8+ctBCfKl6b36UCI="
},
+ "underscore-contrib": {
+ "version": "0.3.0",
+ "resolved": "https://registry.npmjs.org/underscore-contrib/-/underscore-contrib-0.3.0.tgz",
+ "integrity": "sha1-ZltmwkeD+PorGMn4y7Dix9SMJsc=",
+ "requires": {
+ "underscore": "1.6.0"
+ },
+ "dependencies": {
+ "underscore": {
+ "version": "1.6.0",
+ "resolved": "https://registry.npmjs.org/underscore/-/underscore-1.6.0.tgz",
+ "integrity": "sha1-izixDKze9jM3uLJOT/htRa6lKag="
+ }
+ }
+ },
+ "universalify": {
+ "version": "0.1.1",
+ "resolved": "https://registry.npmjs.org/universalify/-/universalify-0.1.1.tgz",
+ "integrity": "sha1-+nG63UQ3r0wUiEHjs7Fl+enlkLc="
+ },
"url": {
"version": "0.11.0",
"resolved": "https://registry.npmjs.org/url/-/url-0.11.0.tgz",
@@ -3430,6 +5067,12 @@
"resolved": "https://registry.npmjs.org/uuid/-/uuid-3.1.0.tgz",
"integrity": "sha512-DIWtzUkw04M4k3bf1IcpS2tngXEL26YUD2M0tMDUpnUrz2hgzUBlD55a4FjdLGPvfHxS6uluGWvaVEqgBcVa+g=="
},
+ "uws": {
+ "version": "9.14.0",
+ "resolved": "https://registry.npmjs.org/uws/-/uws-9.14.0.tgz",
+ "integrity": "sha512-HNMztPP5A1sKuVFmdZ6BPVpBQd5bUjNC8EFMFiICK+oho/OQsAJy5hnIx4btMHiOk8j04f/DbIlqnEZ9d72dqg==",
+ "optional": true
+ },
"verror": {
"version": "1.10.0",
"resolved": "https://registry.npmjs.org/verror/-/verror-1.10.0.tgz",
@@ -3440,6 +5083,11 @@
"extsprintf": "1.3.0"
}
},
+ "vlq": {
+ "version": "0.2.3",
+ "resolved": "https://registry.npmjs.org/vlq/-/vlq-0.2.3.tgz",
+ "integrity": "sha512-DRibZL6DsNhIgYQ+wNdWDL2SL3bKPlVrRiBqV5yuMm++op8W4kGFtaQfCs4KEJn0wBZcHVHJ3eoywX8983k1ow=="
+ },
"vm-browserify": {
"version": "0.0.4",
"resolved": "https://registry.npmjs.org/vm-browserify/-/vm-browserify-0.0.4.tgz",
@@ -3449,6 +5097,23 @@
"indexof": "0.0.1"
}
},
+ "w3c-hr-time": {
+ "version": "1.0.1",
+ "resolved": "https://registry.npmjs.org/w3c-hr-time/-/w3c-hr-time-1.0.1.tgz",
+ "integrity": "sha1-gqwr/2PZUOqeMYmlimViX+3xkEU=",
+ "dev": true,
+ "requires": {
+ "browser-process-hrtime": "0.1.2"
+ }
+ },
+ "walk": {
+ "version": "2.3.9",
+ "resolved": "https://registry.npmjs.org/walk/-/walk-2.3.9.tgz",
+ "integrity": "sha1-MbTbZnjyrgHDnqn7hyWpAx5Vins=",
+ "requires": {
+ "foreachasync": "3.0.0"
+ }
+ },
"webidl-conversions": {
"version": "4.0.2",
"resolved": "https://registry.npmjs.org/webidl-conversions/-/webidl-conversions-4.0.2.tgz",
@@ -3456,18 +5121,18 @@
"dev": true
},
"whatwg-encoding": {
- "version": "1.0.1",
- "resolved": "https://registry.npmjs.org/whatwg-encoding/-/whatwg-encoding-1.0.1.tgz",
- "integrity": "sha1-PGxFGhmO567FWx7GHQkgxngBpfQ=",
+ "version": "1.0.3",
+ "resolved": "https://registry.npmjs.org/whatwg-encoding/-/whatwg-encoding-1.0.3.tgz",
+ "integrity": "sha512-jLBwwKUhi8WtBfsMQlL4bUUcT8sMkAtQinscJAe/M4KHCkHuUJAF6vuB0tueNIw4c8ziO6AkRmgY+jL3a0iiPw==",
"dev": true,
"requires": {
- "iconv-lite": "0.4.13"
+ "iconv-lite": "0.4.19"
},
"dependencies": {
"iconv-lite": {
- "version": "0.4.13",
- "resolved": "https://registry.npmjs.org/iconv-lite/-/iconv-lite-0.4.13.tgz",
- "integrity": "sha1-H4irpKsLFQjoMSrMOTRfNumS4vI=",
+ "version": "0.4.19",
+ "resolved": "https://registry.npmjs.org/iconv-lite/-/iconv-lite-0.4.19.tgz",
+ "integrity": "sha512-oTZqweIP51xaGPI4uPa56/Pri/480R+mo7SeU+YETByQNhDG55ycFyNLIgta9vXhILrxXDmF7ZGhqZIcuN0gJQ==",
"dev": true
}
}
@@ -3477,14 +5142,20 @@
"resolved": "https://registry.npmjs.org/whatwg-fetch/-/whatwg-fetch-0.9.0.tgz",
"integrity": "sha1-DjaExsuZlbQ+/J3wPkw2XZX9nMA="
},
+ "whatwg-mimetype": {
+ "version": "2.1.0",
+ "resolved": "https://registry.npmjs.org/whatwg-mimetype/-/whatwg-mimetype-2.1.0.tgz",
+ "integrity": "sha512-FKxhYLytBQiUKjkYteN71fAUA3g6KpNXoho1isLiLSB3N1G4F35Q5vUxWfKFhBwi5IWF27VE6WxhrnnC+m0Mew==",
+ "dev": true
+ },
"whatwg-url": {
- "version": "6.1.0",
- "resolved": "https://registry.npmjs.org/whatwg-url/-/whatwg-url-6.1.0.tgz",
- "integrity": "sha1-X8gnm5PXVIO5ztiyYjmFSEehhXg=",
+ "version": "6.4.0",
+ "resolved": "https://registry.npmjs.org/whatwg-url/-/whatwg-url-6.4.0.tgz",
+ "integrity": "sha512-Z0CVh/YE217Foyb488eo+iBv+r7eAQ0wSTyApi9n06jhcA3z6Nidg/EGvl0UFkg7kMdKxfBzzr+o9JF+cevgMg==",
"dev": true,
"requires": {
"lodash.sortby": "4.7.0",
- "tr46": "0.0.3",
+ "tr46": "1.0.1",
"webidl-conversions": "4.0.2"
}
},
@@ -3497,11 +5168,18 @@
"isexe": "2.0.0"
}
},
+ "wide-align": {
+ "version": "1.1.2",
+ "resolved": "https://registry.npmjs.org/wide-align/-/wide-align-1.1.2.tgz",
+ "integrity": "sha512-ijDLlyQ7s6x1JgCLur53osjm/UXUYD9+0PbYKrBsYisYXzCxN+HC3mYDNy/dWdmf3AwqwU3CXwDCvsNgGK1S0w==",
+ "requires": {
+ "string-width": "1.0.2"
+ }
+ },
"window-size": {
"version": "0.1.0",
"resolved": "https://registry.npmjs.org/window-size/-/window-size-0.1.0.tgz",
"integrity": "sha1-VDjNLqk7IC76Ohn+iIeu58lPnJ0=",
- "dev": true,
"optional": true
},
"wordwrap": {
@@ -3515,12 +5193,32 @@
"resolved": "https://registry.npmjs.org/wrappy/-/wrappy-1.0.2.tgz",
"integrity": "sha1-tSQ9jz7BqjXxNkYFvA0QNuMKtp8="
},
+ "ws": {
+ "version": "3.3.3",
+ "resolved": "https://registry.npmjs.org/ws/-/ws-3.3.3.tgz",
+ "integrity": "sha512-nnWLa/NwZSt4KQJu51MYlCcSQ5g7INpOrOMt4XV8j4dqTXdmlUmSHQ8/oLC069ckre0fRsgfvsKwbTdtKLCDkA==",
+ "requires": {
+ "async-limiter": "1.0.0",
+ "safe-buffer": "5.1.1",
+ "ultron": "1.1.1"
+ }
+ },
"xml-name-validator": {
- "version": "2.0.1",
- "resolved": "https://registry.npmjs.org/xml-name-validator/-/xml-name-validator-2.0.1.tgz",
- "integrity": "sha1-TYuPHszTQZqjYgYb7O9RXh5VljU=",
+ "version": "3.0.0",
+ "resolved": "https://registry.npmjs.org/xml-name-validator/-/xml-name-validator-3.0.0.tgz",
+ "integrity": "sha512-A5CUptxDsvxKJEU3yO6DuWBSJz/qizqzJKOMIfUJHETbBw/sFaDxgd6fxm1ewUaM0jZ444Fc5vC5ROYurg/4Pw==",
"dev": true
},
+ "xmlcreate": {
+ "version": "1.0.2",
+ "resolved": "https://registry.npmjs.org/xmlcreate/-/xmlcreate-1.0.2.tgz",
+ "integrity": "sha1-+mv3YqYKQT+z3Y9LA8WyaSONMI8="
+ },
+ "xmlhttprequest-ssl": {
+ "version": "1.5.5",
+ "resolved": "https://registry.npmjs.org/xmlhttprequest-ssl/-/xmlhttprequest-ssl-1.5.5.tgz",
+ "integrity": "sha1-wodrBhaKrcQOV9l+gRkayPQ5iz4="
+ },
"xss": {
"version": "0.3.7",
"resolved": "https://registry.npmjs.org/xss/-/xss-0.3.7.tgz",
@@ -3536,11 +5234,15 @@
"integrity": "sha1-pcbVMr5lbiPbgg77lDofBJmNY68=",
"dev": true
},
+ "yallist": {
+ "version": "3.0.2",
+ "resolved": "https://registry.npmjs.org/yallist/-/yallist-3.0.2.tgz",
+ "integrity": "sha1-hFK0u36Dx8GI2AQcGoN8dz1ti7k="
+ },
"yargs": {
"version": "3.10.0",
"resolved": "https://registry.npmjs.org/yargs/-/yargs-3.10.0.tgz",
"integrity": "sha1-9+572FfdfB0tOMDnTvvWgdFDH9E=",
- "dev": true,
"optional": true,
"requires": {
"camelcase": "1.2.1",
@@ -3548,6 +5250,11 @@
"decamelize": "1.2.0",
"window-size": "0.1.0"
}
+ },
+ "yeast": {
+ "version": "0.1.2",
+ "resolved": "https://registry.npmjs.org/yeast/-/yeast-0.1.2.tgz",
+ "integrity": "sha1-AI4G2AlDIMNy28L47XagymyKxBk="
}
}
}
diff --git a/frontend-js/package.json b/frontend-js/package.json
index 46a8504fbf29130fb4ff3f6b83537b40c337bf0c..c58ef811616646fc6c3ec46af0c93519bb53e1de 100644
--- a/frontend-js/package.json
+++ b/frontend-js/package.json
@@ -4,7 +4,7 @@
"description": "frontentd for minerva google maps interface",
"main": "minerva.js",
"scripts": {
- "build:css": "cleancss --skip-rebase -o dist/minerva.css node_modules/dual-listbox/dist/*.css node_modules/multi-checkbox-list/dist/*.css src/main/css/*.css",
+ "build:css": "cleancss --skip-rebase -o dist/minerva.css node_modules/openlayers/dist/ol.css node_modules/dual-listbox/dist/*.css node_modules/multi-checkbox-list/dist/*.css src/main/css/*.css",
"build:js": "browserify --debug --standalone minerva src/main/js/minerva.js | exorcist dist/minerva.js.map > dist/minerva.js ",
"//": "rm -rf dist & rmdir /q /s dist & mkdir dist & browserify --debug --standalone minerva src/main/js/minerva.js | exorcist dist/minerva.js.map > dist/minerva.js & uglifyjs --compress --mangle --in-source-map dist/minerva.js.map --source-map-include-sources --source-map dist/minerva.min.js.map -o dist/minerva.min.js dist/minerva.js",
"build-deploy": "npm run build && npm run deploy",
@@ -31,8 +31,7 @@
"istanbul": "0.4.5",
"jquery": "1.12.1",
"jquery-ui-dist": "1.12.1",
- "jsdom": "11.1.0",
- "jsdom-global": "^2.1.1",
+ "jsdom": "11.7.0",
"jshint": "^2.9.4",
"log4js-memory-appender": "1.0.5",
"mkdirp": "^0.5.1",
@@ -50,10 +49,19 @@
"jszip": "^3.1.4",
"log4js": "0.6.38",
"multi-checkbox-list": "^0.2.0",
+ "openlayers": "^4.6.5",
"pileup": "^0.6.8",
"request": "^2.82.0",
"spectrum-colorpicker": "^1.8.0",
"text-encoding": "^0.6.4",
"xss": "^0.3.7"
+ },
+ "license": "AGPL-3.0",
+ "bugs": {
+ "url": "https://git-r3lab.uni.lu/piotr.gawron/minerva/issues"
+ },
+ "repository": {
+ "type": "git",
+ "url": "git+https://git-r3lab.uni.lu/piotr.gawron/minerva.git"
}
}
diff --git a/frontend-js/scripts/refresh_mock_requests.js b/frontend-js/scripts/refresh_mock_requests.js
index 6d0c1842959742e39253419b3b3109c55c07c330..00c3aae528ce9209155863343a1412b334c00ab9 100644
--- a/frontend-js/scripts/refresh_mock_requests.js
+++ b/frontend-js/scripts/refresh_mock_requests.js
@@ -1,10 +1,10 @@
-const testFolder = './testFiles/apiCalls';
-const apiBaseDir = 'http://localhost:8080/minerva/api/';
-const fs = require('fs');
-const path = require('path');
-const request = require('request');
+var testFolder = './testFiles/apiCalls';
+var apiBaseDir = 'http://localhost:8080/minerva/api/';
+var fs = require('fs');
+var path = require('path');
+var request = require('request');
-const Promise = require('bluebird');
+var Promise = require('bluebird');
function listFiles(dir, filelist) {
var fs = fs || require('fs'),
diff --git a/frontend-js/src/main/css/global.css b/frontend-js/src/main/css/global.css
index df8125d1768800ba909d1e2cb39e4e68fdda579a..a4164f27c42f09b6099346093debd292b017941a 100644
--- a/frontend-js/src/main/css/global.css
+++ b/frontend-js/src/main/css/global.css
@@ -696,4 +696,30 @@ a.adminLink:hover {
.labelText {
font-size: 13px;
font-weight: 900
+}
+
+/* custom open layers styling */
+
+.labelText {
+ font-size: 13px;
+ font-weight: 900
+}
+
+.minerva-ol-bottom-left{
+ bottom: .5em;
+ left: .5em;
+}
+
+.minerva-ol-bottom-right{
+ bottom: .5em;
+ right: .5em;
+}
+
+.minerva-ol-top-right{
+ top: .5em;
+ right: .5em;
+}
+
+.popover {
+ max-width: 600px;
}
\ No newline at end of file
diff --git a/frontend-js/src/main/js/Configuration.js b/frontend-js/src/main/js/Configuration.js
index 4755bee12f43b880d69f54d33f45bfd23d8ccff9..478c8deb935bace0dd9b62fe72f059642d55cedd 100644
--- a/frontend-js/src/main/js/Configuration.js
+++ b/frontend-js/src/main/js/Configuration.js
@@ -55,6 +55,7 @@ function Configuration(json) {
self.setReactionTypes(json.reactionTypes);
self.setMiriamTypes(json.miriamTypes);
self.setMapTypes(json.mapTypes);
+ self.setMapCanvasTypes(json.mapCanvasTypes);
self.setModificationStateTypes(json.modificationStateTypes);
self.setPrivilegeTypes(json.privilegeTypes);
self.setAnnotators(json.annotators);
@@ -203,6 +204,22 @@ Configuration.prototype.getMapTypes = function () {
return this._mapTypes;
};
+/**
+ *
+ * @param {Array}mapCanvasTypes
+ */
+Configuration.prototype.setMapCanvasTypes = function (mapCanvasTypes) {
+ this._mapCanvasTypes = mapCanvasTypes;
+};
+
+/**
+ *
+ * @returns {Array}
+ */
+Configuration.prototype.getMapCanvasTypes = function () {
+ return this._mapCanvasTypes;
+};
+
Configuration.prototype.setPrivilegeTypes = function (privilegeTypes) {
this._privilegeTypes = [];
for (var key in privilegeTypes) {
@@ -409,7 +426,7 @@ Configuration.prototype.getElementTypeTree = function () {
var treeNode = treeNodes[treeNodeName];
if (treeNode.data !== undefined) {
var parentNode = treeNodes[treeNode.data.parentClass];
- if (parentNode.data===undefined || parentNode.data.name !== "Compartment") {
+ if (parentNode.data === undefined || parentNode.data.name !== "Compartment") {
parentNode.children.push(treeNode);
}
}
diff --git a/frontend-js/src/main/js/Export.js b/frontend-js/src/main/js/Export.js
index 3c096991c050ab9f310469d7a7e62ec72dc0943a..ee603b203e1665952909c620dd890a61ed4d6bd4 100644
--- a/frontend-js/src/main/js/Export.js
+++ b/frontend-js/src/main/js/Export.js
@@ -131,7 +131,7 @@ Export.prototype.addTab = function(params, navElement, contentElement) {
this._panels.push(new params.panelClass({
element : contentDiv,
project : self.getProject(),
- configuration : self.getConfiguration(),
+ configuration : self.getConfiguration()
}));
};
diff --git a/frontend-js/src/main/js/Functions.js b/frontend-js/src/main/js/Functions.js
index 65eb061338ef7ae53a1c916c3e3df8cfbcc2d5fa..98c49e6d3fad52e204f2c60387d471c59acd33e6 100644
--- a/frontend-js/src/main/js/Functions.js
+++ b/frontend-js/src/main/js/Functions.js
@@ -1,6 +1,7 @@
"use strict";
var Promise = require("bluebird");
+var Point = require('./map/canvas/Point');
/* exported logger */
@@ -42,10 +43,28 @@ Functions.intToColorString = function (value) {
return '#' + colorStr;
};
+
+/**
+ *
+ * @param {string} color
+ * @param {number} opacity
+ * @returns {string}
+ */
+Functions.colorToRgbaString = function (color, opacity) {
+ if (color[0] !== '#' || color.length !== 7) {
+ throw new Error("Expected color in #RRGGBB format");
+ }
+ var red = parseInt(color.substr(1, 2), 16);
+ var green = parseInt(color.substr(3, 2), 16);
+ var blue = parseInt(color.substr(5, 2), 16);
+ var alpha = opacity !== undefined ? opacity : 1.0;
+ return "rgba(" + red + "," + green + "," + blue + "," + alpha + ")";
+};
+
/**
* Returns stack trace.
*
- * @returns stack trace
+ * @returns {string} stack trace
*/
Functions.stackTrace = function () {
var err = new Error();
@@ -58,7 +77,7 @@ Functions.stackTrace = function () {
* @param element
* element for which we want to get the position (top left corner)
*
- * @return coordinates of the element
+ * @return {Point} coordinates of the element
*
*/
Functions.getPosition = function (element) {
@@ -70,10 +89,7 @@ Functions.getPosition = function (element) {
yPosition += (element.offsetTop - element.scrollTop + element.clientTop);
element = element.offsetParent;
}
- return {
- x: xPosition,
- y: yPosition
- };
+ return new Point(xPosition, yPosition);
};
/**
@@ -81,10 +97,10 @@ Functions.getPosition = function (element) {
* a second parameter. Both: point and polygon should use google.map.point
* class.
*
- * @param point
+ * @param {Point} point
* point which we want to check
*
- * @param polygon
+ * @param {Point[]} polygon
* polygon where we check the point
*/
@@ -121,7 +137,7 @@ Functions.browser = {
var re;
if (navigator.appName === 'Microsoft Internet Explorer') {
this.name = "IE";
- re = new RegExp("MSIE ([0-9]{1,}[\.0-9]{0,})");
+ re = new RegExp("MSIE ([0-9]+[\.0-9]*)");
if (re.exec(ua) !== undefined && re.exec(ua) !== null) {
this.version = parseFloat(RegExp.$1);
}
@@ -166,6 +182,10 @@ Functions.isDomElement = function (o) {
o && typeof o === "object" && o !== null && o.nodeType === 1 && typeof o.nodeName === "string");
};
+/**
+ *
+ * @returns {Promise<string>}
+ */
Functions.overlayToColor = function (elementOverlay) {
var self = this;
/* jslint bitwise: true */
@@ -240,6 +260,18 @@ Functions.getElementByName = function (element, name) {
return undefined;
};
+/**
+ *
+ * @param {Object} params
+ * @param {string} params.type type of the {HTMLElement} to be created
+ * @param {string} [params.inputType] type of the input to be created
+ * @param {string} [params.className] css class of the element
+ * @param {string} [params.style] css styling
+ * @param {string} [params.value]
+ * @param {string|HTMLElement} [params.content]
+ *
+ * @returns {HTMLElement}
+ */
Functions.createElement = function (params) {
var result = document.createElement(params.type);
if (params.id !== null && params.id !== undefined) {
@@ -255,7 +287,9 @@ Functions.createElement = function (params) {
result.type = params.inputType;
}
if (params.content !== null && params.content !== undefined) {
- if (params.xss !== false) {
+ if (Functions.isDomElement(params.content)) {
+ result.appendChild(params.content);
+ } else if (params.xss !== false) {
var content = xss(params.content);
if (content !== params.content) {
logger.warn("XSS changed content: " + params.content);
@@ -286,6 +320,9 @@ Functions.createElement = function (params) {
if (params.title !== null && params.title !== undefined) {
result.title = params.title;
}
+ if (params.index !== null && params.index !== undefined) {
+ result.index = params.index;
+ }
if (params.data !== null && params.data !== undefined) {
$(result).attr("data", params.data);
}
@@ -316,11 +353,11 @@ function distToSegmentSquared(p, v, w) {
return dist2(p, w);
}
- return dist2(p, new google.maps.Point(v.x + t * (w.x - v.x), v.y + t * (w.y - v.y)));
+ return dist2(p, new Point(v.x + t * (w.x - v.x), v.y + t * (w.y - v.y)));
}
Functions.distance = function (p1, el2) {
- if (el2 instanceof google.maps.Point) {
+ if (el2 instanceof Point) {
var p2 = el2;
return Math.sqrt((Math.pow(p1.x - p2.x, 2)) + (Math.pow(p1.y - p2.y, 2)));
} else {
@@ -336,7 +373,7 @@ Functions.removeChildren = function (element) {
/**
*
- * @returns Promise resolved after javascript is loaded
+ * @returns {Promise} resolved after javascript is loaded
*/
Functions.loadScript = function (url) {
return new Promise(function (resolve) {
diff --git a/frontend-js/src/main/js/GuiConnector.js b/frontend-js/src/main/js/GuiConnector.js
index d46ae636c48e4428ee3615f78043dcb4adb8b94c..4bb42c2a708488eb954b12c5634d5382d6b43e5f 100644
--- a/frontend-js/src/main/js/GuiConnector.js
+++ b/frontend-js/src/main/js/GuiConnector.js
@@ -16,8 +16,10 @@ var NetworkError = require('./NetworkError');
*/
function GuiConnector() {
// X coordinate of the mouse in a browser.
+ //@type {number}
this.xPos = 0;
// coordinate of the mouse in a browser.
+ //@type {number}
this.yPos = 0;
this.getParams = [];
@@ -134,6 +136,11 @@ GuiConnector.prototype.getLoadingImg = function () {
return "icons/ajax-loader.gif";
};
+
+GuiConnector.prototype.getEmptyTileUrl = function () {
+ return "resources/images/empty_tile.png";
+};
+
/**
* Returns home directory for images in the application.
*/
diff --git a/frontend-js/src/main/js/ObjectWithListeners.js b/frontend-js/src/main/js/ObjectWithListeners.js
index dfcd7ecfa452eb31c8c6a1210b8434b208a782cd..633390bd4eff7dae5921512606b660f10e4d9083 100644
--- a/frontend-js/src/main/js/ObjectWithListeners.js
+++ b/frontend-js/src/main/js/ObjectWithListeners.js
@@ -7,18 +7,23 @@ var logger = require('./logger');
/**
* An abstract class that allows to register listeners and call them in case of
* events.
+ * @constructor
*/
function ObjectWithListeners() {
this._validListeners = [];
this._validPropertyListeners = [];
}
+/**
+ * @callback ListenerCallback
+ * @param event
+ */
/**
* Adds a listener function to the object.
*
- * @param type
+ * @param {string} type
* string defining type of the listener
- * @param fun
+ * @param {ListenerCallback} fun
* function that should be thrown when type event occurs
*/
ObjectWithListeners.prototype.addListener = function (type, fun) {
@@ -36,9 +41,9 @@ ObjectWithListeners.prototype.addListener = function (type, fun) {
/**
* Adds a property change listener function to the object.
*
- * @param name
+ * @param {string} name
* string defining property name
- * @param fun
+ * @param {function} fun
* function that should be thrown when firePropertyChangeListener is
* called
*/
@@ -137,11 +142,12 @@ ObjectWithListeners.prototype.removePropertyListener = function (name, fun) {
/**
* Fires listeners of a given type.
*
- * @param type
+ * @param {string} type
* type of the listener (string)
* @param arg
* argument data passed to the handler
*
+ * @returns {PromiseLike}
*/
ObjectWithListeners.prototype.callListeners = function (type, arg) {
if (this._validListeners[type] === undefined) {
@@ -194,7 +200,7 @@ ObjectWithListeners.prototype.firePropertyChangeListener = function (propertyNam
propertyName: propertyName,
object: self,
oldVal: oldValue,
- newVal: newValue,
+ newVal: newValue
};
promises.push(listenerList[i](e));
}
diff --git a/frontend-js/src/main/js/ServerConnector.js b/frontend-js/src/main/js/ServerConnector.js
index 4ff0fc4f086e3d63e29ff7cb22a449573e513db7..82c4d0d0d856c150c879479faf597afc57697f0f 100644
--- a/frontend-js/src/main/js/ServerConnector.js
+++ b/frontend-js/src/main/js/ServerConnector.js
@@ -41,6 +41,8 @@ var GuiConnector = require('./GuiConnector');
var ObjectWithListeners = require('./ObjectWithListeners');
+var Point = require('./map/canvas/Point');
+
/**
* This object contains methods that will communicate with server.
*/
@@ -148,6 +150,11 @@ function isSessionExpiredError(error) {
return false;
}
+/**
+ *
+ * @param params
+ * @returns {PromiseLike}
+ */
ServerConnector.sendRequest = function (params) {
var self = this;
if (arguments.length > 1) {
@@ -234,6 +241,12 @@ ServerConnector.sendDeleteRequest = function (url, json) {
});
};
+/**
+ *
+ * @param url
+ * @param json
+ * @returns {PromiseLike}
+ */
ServerConnector.sendPatchRequest = function (url, json) {
return this.sendRequest({
method: "PATCH",
@@ -277,13 +290,11 @@ ServerConnector.createGetParams = function (params, prefix) {
if (prefix !== undefined) {
key = prefix + "." + key;
}
-
- if (value instanceof google.maps.Point) {
+ if (value instanceof Point) {
value = this.pointToString(value);
} else if (Object.prototype.toString.call(value) === '[object Array]') {
value = this.idsToString(value);
} else if (typeof value === 'string' || value instanceof String || !isNaN(value)) {
-
} else {
result += this.createGetParams(value, key);
value = undefined;
@@ -829,6 +840,11 @@ ServerConnector.getProject = function (projectId) {
});
};
+/**
+ *
+ * @param {Project} project
+ * @returns {PromiseLike|Promise}
+ */
ServerConnector.updateProject = function (project) {
var self = this;
var queryParams = {
@@ -840,14 +856,16 @@ ServerConnector.updateProject = function (project) {
version: project.getVersion(),
notifyEmail: project.getNotifyEmail(),
organism: self.serialize(project.getOrganism()),
- disease: self.serialize(project.getDisease())
+ disease: self.serialize(project.getDisease()),
+ mapCanvasType: project.getMapCanvasType()
}
};
return self.sendPatchRequest(self.getProjectUrl(queryParams), filterParams).then(function (content) {
var downloadedProject = new Project(content);
- project.update(downloadedProject);
+ return project.update(downloadedProject);
+ }).then(function () {
return project;
- }).then(null, function (error) {
+ }).catch(function (error) {
if ((error instanceof NetworkError)) {
switch (error.statusCode) {
case HttpStatus.FORBIDDEN:
@@ -1243,6 +1261,12 @@ ServerConnector.getMaxSearchDistance = function () {
return this.getConfigurationParam(ConfigurationType.SEARCH_DISTANCE);
};
+/**
+ *
+ * @param {number} overlayId
+ * @param {string} projectId
+ * @returns {PromiseLike<DataOverlay>}
+ */
ServerConnector.getOverlayById = function (overlayId, projectId) {
var self = this;
var queryParams = {
@@ -1358,6 +1382,11 @@ ServerConnector.getComments = function (params) {
});
};
+/**
+ *
+ * @param {Project} [project]
+ * @returns {SessionData}
+ */
ServerConnector.getSessionData = function (project) {
if (this._sessionData === undefined) {
this._sessionData = new SessionData(null);
@@ -1369,6 +1398,16 @@ ServerConnector.getSessionData = function (project) {
return this._sessionData;
};
+/**
+ *
+ * @param {number} params.modelId
+ * @param {number} [params.projectId]
+ * @param {Point} params.coordinates
+ * @param {number} [params.count]
+ * @param {string} [params.type]
+ *
+ * @returns {PromiseLike<IdentifiedElement[]>}
+ */
ServerConnector.getClosestElementsByCoordinates = function (params) {
var self = this;
var queryParams = {
diff --git a/frontend-js/src/main/js/SessionData.js b/frontend-js/src/main/js/SessionData.js
index 08cc58aaa753c729c12878c1515258e71d5c1925..3d3776a211ce0151e1beae29383c1daf55ff4f34 100644
--- a/frontend-js/src/main/js/SessionData.js
+++ b/frontend-js/src/main/js/SessionData.js
@@ -2,6 +2,7 @@
/* exported logger */
+var Point = require('./map/canvas/Point');
var SessionObjectType = require('./SessionObjectType');
var Cookies = require('js-cookie');
@@ -133,11 +134,21 @@ SessionData.prototype.setVisibleOverlays = function(value) {
Cookies.set(key, value + "");
};
+/**
+ *
+ * @param {MapModel} model
+ * @param {number} value
+ */
SessionData.prototype.setZoomLevel = function(model, value) {
var key = this.getKey(SessionObjectType.ZOOM_LEVEL, [ model.getId() ]);
Cookies.set(key, value + "");
};
+/**
+ *
+ * @param {MapModel} model
+ * @returns {number}
+ */
SessionData.prototype.getZoomLevel = function(model) {
var key = this.getKey(SessionObjectType.ZOOM_LEVEL, [ model.getId() ]);
var value = Cookies.get(key);
@@ -158,8 +169,7 @@ SessionData.prototype.setToken = function(token) {
SessionData.prototype.getToken = function() {
var key = SessionObjectType.TOKEN;
- var value = Cookies.get(key);
- return value;
+ return Cookies.get(key);
};
SessionData.prototype.setLogin = function(login) {
@@ -173,8 +183,7 @@ SessionData.prototype.setLogin = function(login) {
SessionData.prototype.getLogin = function() {
var key = SessionObjectType.LOGIN;
- var value = Cookies.get(key);
- return value;
+ return Cookies.get(key);
};
SessionData.prototype.setCenter = function(model, value) {
@@ -182,16 +191,27 @@ SessionData.prototype.setCenter = function(model, value) {
Cookies.set(key, value.x + "," + value.y);
};
+/**
+ *
+ * @param {MapModel} model
+ * @returns {Point}
+ */
SessionData.prototype.getCenter = function(model) {
var key = this.getKey(SessionObjectType.CENTER, [ model.getId() ]);
var value = Cookies.get(key);
if (value !== undefined) {
var tmp = value.split(",");
- value = new google.maps.Point(tmp[0], tmp[1]);
+ value = new Point(tmp[0], tmp[1]);
}
return value;
};
+/**
+ *
+ * @param {string} type
+ * @param {Array} [args]
+ * @returns {string}
+ */
SessionData.prototype.getKey = function(type, args) {
if (type === undefined) {
throw new Error("Undefined type");
diff --git a/frontend-js/src/main/js/SessionObjectType.js b/frontend-js/src/main/js/SessionObjectType.js
index 1464e5b946d5b07b2aa5d10b7a9a21d19d65da08..6240a50fff5210bfaf92ec6b7466e4f9aa2fc9d6 100644
--- a/frontend-js/src/main/js/SessionObjectType.js
+++ b/frontend-js/src/main/js/SessionObjectType.js
@@ -13,7 +13,7 @@ var SessionObjectType = {
ZOOM_LEVEL : "ZOOM_LEVEL",
TOKEN: "MINERVA_AUTH_TOKEN",
- LOGIN: "LOGIN",
+ LOGIN: "LOGIN"
};
module.exports = SessionObjectType;
diff --git a/frontend-js/src/main/js/gui/AbstractGuiElement.js b/frontend-js/src/main/js/gui/AbstractGuiElement.js
index 5b8a2df578bbe301dbac2a48bb183d3e563a10a5..b44f29a2d774fa5a69ef2bb193b58f0cb60d7a71 100644
--- a/frontend-js/src/main/js/gui/AbstractGuiElement.js
+++ b/frontend-js/src/main/js/gui/AbstractGuiElement.js
@@ -5,8 +5,16 @@
var ObjectWithListeners = require('../ObjectWithListeners');
var PanelControlElementType = require('./PanelControlElementType');
+// noinspection JSUnusedLocalSymbols
var logger = require('../logger');
+/**
+ *
+ * @param params
+ * @constructor
+ *
+ * @extends ObjectWithListeners
+ */
function AbstractGuiElement(params) {
ObjectWithListeners.call(this, params);
@@ -24,6 +32,10 @@ function AbstractGuiElement(params) {
AbstractGuiElement.prototype = Object.create(ObjectWithListeners.prototype);
AbstractGuiElement.prototype.constructor = AbstractGuiElement;
+/**
+ *
+ * @param {CustomMap} map
+ */
AbstractGuiElement.prototype.setMap = function (map) {
if (map === undefined) {
throw new Error("map must be defined");
@@ -31,10 +43,18 @@ AbstractGuiElement.prototype.setMap = function (map) {
this._map = map;
};
+/**
+ *
+ * @returns {CustomMap}
+ */
AbstractGuiElement.prototype.getMap = function () {
return this._map;
};
+/**
+ *
+ * @param {HTMLElement} element
+ */
AbstractGuiElement.prototype.setElement = function (element) {
if (element === undefined || element === null) {
throw new Error("DOM Element must be defined");
@@ -42,14 +62,26 @@ AbstractGuiElement.prototype.setElement = function (element) {
this._element = element;
};
+/**
+ *
+ * @returns {HTMLElement}
+ */
AbstractGuiElement.prototype.getElement = function () {
return this._element;
};
+/**
+ *
+ * @param {Project} project
+ */
AbstractGuiElement.prototype.setProject = function (project) {
this._project = project;
};
+/**
+ *
+ * @returns {Project}
+ */
AbstractGuiElement.prototype.getProject = function () {
if (this._project === undefined || this._project === null) {
return this.getMap().getProject();
@@ -58,6 +90,7 @@ AbstractGuiElement.prototype.getProject = function () {
}
};
+
AbstractGuiElement.prototype.setControlElement = function (type, element) {
if (type === null || type === undefined) {
throw new Error("Unknown control element type");
@@ -89,14 +122,29 @@ AbstractGuiElement.prototype.getLastDownloadUrl = function () {
return this._downloadFile;
};
+/**
+ *
+ * @param {Configuration} configuration
+ */
AbstractGuiElement.prototype.setConfiguration = function (configuration) {
this._configuration = configuration;
};
+/**
+ *
+ * @returns {Configuration}
+ */
AbstractGuiElement.prototype.getConfiguration = function () {
return this._configuration;
};
+/**
+ *
+ * @param {string} [params.content]
+ * @param {string} params.title
+ * @param {boolean} [params.input]
+ * @returns {Promise}
+ */
AbstractGuiElement.prototype.askConfirmRemoval = function (params) {
return new Promise(function (resolve) {
var html;
diff --git a/frontend-js/src/main/js/gui/AddOverlayDialog.js b/frontend-js/src/main/js/gui/AddOverlayDialog.js
index e879287aa7b876799e8af139cc976ba86aee1842..2e4cd33aa17e91782800ecb7cb82aacb18b12ac6 100644
--- a/frontend-js/src/main/js/gui/AddOverlayDialog.js
+++ b/frontend-js/src/main/js/gui/AddOverlayDialog.js
@@ -11,6 +11,7 @@ var NetworkError = require('../NetworkError');
var OverlayParser = require('../map/OverlayParser');
var Functions = require('../Functions');
+// noinspection JSUnusedLocalSymbols
var logger = require('../logger');
var HttpStatus = require('http-status-codes');
diff --git a/frontend-js/src/main/js/gui/CommentDialog.js b/frontend-js/src/main/js/gui/CommentDialog.js
index c2f4a173d1ab0626b58a0b3a604432e357b7afc1..53432445b7288bad452cabdbed4a677c60e8507c 100644
--- a/frontend-js/src/main/js/gui/CommentDialog.js
+++ b/frontend-js/src/main/js/gui/CommentDialog.js
@@ -16,10 +16,10 @@ function CommentDialog(params) {
var self = this;
self._createGui();
$(self.getElement()).dialog({
- autoOpen : false,
- resizable : false,
- width : window.innerWidth / 2,
- height : window.innerHeight / 2
+ autoOpen: false,
+ resizable: false,
+ width: window.innerWidth / 2,
+ height: window.innerHeight / 2
});
}
@@ -38,11 +38,11 @@ function createRow(elements) {
return row;
}
-CommentDialog.prototype.open = function(types) {
+CommentDialog.prototype.open = function (types) {
var self = this;
- self.setTypes([ CommentDialog.GENERAL ]);
+ self.setTypes([CommentDialog.GENERAL]);
- var promises = [ CommentDialog.GENERAL ];
+ var promises = [CommentDialog.GENERAL];
for (var i = 0; i < types.length; i++) {
var ie = types[i];
if (ie.getType() === "ALIAS") {
@@ -53,10 +53,10 @@ CommentDialog.prototype.open = function(types) {
throw new Error("Unknown element type: " + ie.getType());
}
}
- return Promise.all(promises).then(function(elements) {
+ return Promise.all(promises).then(function (elements) {
self.setTypes(elements);
- return ServerConnector.getLoggedUser();
- }).then(function(user) {
+ return self.getMap().getServerConnector().getLoggedUser();
+ }).then(function (user) {
if (user.getLogin() !== "anonymous") {
self.setEmail(user.getEmail());
self.setName(user.getName() + " " + user.getSurname());
@@ -66,7 +66,7 @@ CommentDialog.prototype.open = function(types) {
});
};
-CommentDialog.prototype._createGui = function() {
+CommentDialog.prototype._createGui = function () {
var self = this;
var table = document.createElement('table');
@@ -76,20 +76,20 @@ CommentDialog.prototype._createGui = function() {
var typeOptions = document.createElement("select");
this.setTypeOptions(typeOptions);
- table.appendChild(createRow([ typeLabel, typeOptions ]));
+ table.appendChild(createRow([typeLabel, typeOptions]));
var detailDiv = document.createElement('div');
- table.appendChild(createRow([ document.createElement('div'), detailDiv ]));
+ table.appendChild(createRow([document.createElement('div'), detailDiv]));
var pinnedLabel = document.createElement('label');
pinnedLabel.innerHTML = "Pinned";
var pinnedCheckbox = document.createElement('input');
pinnedCheckbox.type = "checkbox";
- pinnedCheckbox.checked = "checked";
+ $(pinnedCheckbox).prop("checked", true);
- table.appendChild(createRow([ pinnedLabel, pinnedCheckbox ]));
+ table.appendChild(createRow([pinnedLabel, pinnedCheckbox]));
this.setPinnedCheckbox(pinnedCheckbox);
var nameLabel = document.createElement('label');
@@ -97,7 +97,7 @@ CommentDialog.prototype._createGui = function() {
var nameInput = document.createElement('input');
nameInput.type = "text";
- table.appendChild(createRow([ nameLabel, nameInput ]));
+ table.appendChild(createRow([nameLabel, nameInput]));
this.setNameInput(nameInput);
var emailLabel = document.createElement('label');
@@ -105,31 +105,31 @@ CommentDialog.prototype._createGui = function() {
var emailInput = document.createElement('input');
emailInput.type = "text";
- table.appendChild(createRow([ emailLabel, emailInput ]));
+ table.appendChild(createRow([emailLabel, emailInput]));
this.setEmailInput(emailInput);
var contentLabel = document.createElement('label');
contentLabel.innerHTML = "Content:";
var contentInput = document.createElement('textarea');
- contentInput.cols = "80";
- contentInput.rows = "3";
+ contentInput.cols = 80;
+ contentInput.rows = 3;
- table.appendChild(createRow([ contentLabel, contentInput ]));
+ table.appendChild(createRow([contentLabel, contentInput]));
this.setContentInput(contentInput);
var sendButton = document.createElement('button');
sendButton.innerHTML = "Send";
- sendButton.onclick = function() {
- return self.addComment().then(function() {
+ sendButton.onclick = function () {
+ return self.addComment().then(function () {
$(self.getElement()).dialog("close");
});
};
- table.appendChild(createRow([ sendButton ]));
+ table.appendChild(createRow([sendButton]));
self.getElement().appendChild(table);
- typeOptions.onchange = function() {
+ typeOptions.onchange = function () {
var option = self.getSelectedType();
var text = "";
if (option instanceof Alias) {
@@ -160,7 +160,7 @@ CommentDialog.prototype._createGui = function() {
detailDiv.innerHTML = text;
};
};
-CommentDialog.prototype.setTypes = function(types) {
+CommentDialog.prototype.setTypes = function (types) {
var typeOptions = this.getTypeOptions();
while (typeOptions.firstChild) {
typeOptions.removeChild(typeOptions.firstChild);
@@ -168,7 +168,7 @@ CommentDialog.prototype.setTypes = function(types) {
for (var i = 0; i < types.length; i++) {
var option = document.createElement("option");
- option.value = i;
+ option.value = i.toString();
var element = types[i];
var text = element;
if (element instanceof Alias) {
@@ -184,15 +184,15 @@ CommentDialog.prototype.setTypes = function(types) {
this._types = types;
};
-CommentDialog.prototype.getTypes = function() {
+CommentDialog.prototype.getTypes = function () {
return this._types;
};
-CommentDialog.prototype.getSelectedType = function() {
+CommentDialog.prototype.getSelectedType = function () {
return this._types[this.getTypeOptions().value];
};
-CommentDialog.prototype.setSelectedType = function(value) {
+CommentDialog.prototype.setSelectedType = function (value) {
if (Functions.isInt(value)) {
this.getTypeOptions().value = value;
this.getTypeOptions().onchange();
@@ -201,66 +201,66 @@ CommentDialog.prototype.setSelectedType = function(value) {
}
};
-CommentDialog.prototype.getTypeOptions = function() {
+CommentDialog.prototype.getTypeOptions = function () {
return this._typeOptions;
};
-CommentDialog.prototype.setTypeOptions = function(typeOptions) {
+CommentDialog.prototype.setTypeOptions = function (typeOptions) {
this._typeOptions = typeOptions;
};
-CommentDialog.prototype.setContentInput = function(contentInput) {
+CommentDialog.prototype.setContentInput = function (contentInput) {
this._contentInput = contentInput;
};
-CommentDialog.prototype.getContentInput = function() {
+CommentDialog.prototype.getContentInput = function () {
return this._contentInput;
};
-CommentDialog.prototype.setNameInput = function(nameInput) {
+CommentDialog.prototype.setNameInput = function (nameInput) {
this._nameInput = nameInput;
};
-CommentDialog.prototype.getNameInput = function() {
+CommentDialog.prototype.getNameInput = function () {
return this._nameInput;
};
-CommentDialog.prototype.setEmailInput = function(emailInput) {
+CommentDialog.prototype.setEmailInput = function (emailInput) {
this._emailInput = emailInput;
};
-CommentDialog.prototype.getEmailInput = function() {
+CommentDialog.prototype.getEmailInput = function () {
return this._emailInput;
};
-CommentDialog.prototype.setPinnedCheckbox = function(pinnedCheckbox) {
+CommentDialog.prototype.setPinnedCheckbox = function (pinnedCheckbox) {
this._pinnedCheckbox = pinnedCheckbox;
};
-CommentDialog.prototype.getPinnedCheckbox = function() {
+CommentDialog.prototype.getPinnedCheckbox = function () {
return this._pinnedCheckbox;
};
-CommentDialog.prototype.getTypes = function() {
+CommentDialog.prototype.getTypes = function () {
return this._types;
};
-CommentDialog.prototype.setName = function(name) {
+CommentDialog.prototype.setName = function (name) {
this.getNameInput().value = name;
};
-CommentDialog.prototype.getName = function() {
+CommentDialog.prototype.getName = function () {
return this.getNameInput().value;
};
-CommentDialog.prototype.getEmail = function() {
+CommentDialog.prototype.getEmail = function () {
return this.getEmailInput().value;
};
-CommentDialog.prototype.setEmail = function(email) {
+CommentDialog.prototype.setEmail = function (email) {
this.getEmailInput().value = email;
};
-CommentDialog.prototype.getContent = function() {
+CommentDialog.prototype.getContent = function () {
return this.getContentInput().value;
};
-CommentDialog.prototype.isPinned = function() {
+CommentDialog.prototype.isPinned = function () {
return this.getPinnedCheckbox().checked;
};
-CommentDialog.prototype.getSelectedTypeId = function() {
+CommentDialog.prototype.getSelectedTypeId = function () {
var selected = this.getSelectedType();
if (selected instanceof Alias) {
return selected.getId();
@@ -271,7 +271,7 @@ CommentDialog.prototype.getSelectedTypeId = function() {
}
};
-CommentDialog.prototype.getSelectedTypeClass = function() {
+CommentDialog.prototype.getSelectedTypeClass = function () {
var selected = this.getSelectedType();
if (selected instanceof Alias) {
return "ALIAS";
@@ -282,25 +282,25 @@ CommentDialog.prototype.getSelectedTypeClass = function() {
}
};
-CommentDialog.prototype.addComment = function() {
+CommentDialog.prototype.addComment = function () {
var self = this;
var name = self.getName();
- return ServerConnector.addComment({
- modelId : self.getMap().getActiveSubmapId(),
- coordinates : self.getMap().getActiveSubmapClickCoordinates(),
- name : name,
- email : self.getEmail(),
- content : self.getContent(),
- pinned : self.isPinned(),
- elementId : self.getSelectedTypeId(),
- elementType : self.getSelectedTypeClass()
-
- }).then(function(comment){
+ return self.getMap().getServerConnector().addComment({
+ modelId: self.getMap().getActiveSubmapId(),
+ coordinates: self.getMap().getActiveSubmapClickCoordinates(),
+ name: name,
+ email: self.getEmail(),
+ content: self.getContent(),
+ pinned: self.isPinned(),
+ elementId: self.getSelectedTypeId(),
+ elementType: self.getSelectedTypeClass()
+
+ }).then(function (comment) {
return self.getMap().getOverlayByName("comment").addComment(comment);
});
};
-CommentDialog.prototype.destroy = function() {
+CommentDialog.prototype.destroy = function () {
$(this.getElement()).dialog("destroy");
};
diff --git a/frontend-js/src/main/js/gui/ContextMenu.js b/frontend-js/src/main/js/gui/ContextMenu.js
index f28a44af6f03045285b8ca6b6de3356c1643a2db..f942ae1578adfc322fa4541bdb617ce71b790731 100644
--- a/frontend-js/src/main/js/gui/ContextMenu.js
+++ b/frontend-js/src/main/js/gui/ContextMenu.js
@@ -69,6 +69,12 @@ ContextMenu.prototype.addOption = function (name, handler, disabled) {
}
};
+/**
+ *
+ * @param {number} x
+ * @param {number} y
+ * @param {number} timestamp
+ */
ContextMenu.prototype.open = function (x, y, timestamp) {
var self = this;
self._handledTimeStamp = timestamp;
@@ -108,7 +114,7 @@ function extractDataOverlayIds(dataOverlays) {
ContextMenu.prototype.createExportAsImageSubmenu = function () {
var self = this;
- return ServerConnector.getImageConverters().then(function (converters) {
+ return self.getMap().getServerConnector().getImageConverters().then(function (converters) {
var li = Functions.createElement({
type: "li"
});
@@ -123,17 +129,17 @@ ContextMenu.prototype.createExportAsImageSubmenu = function () {
submenu.addOption(converter.name, function () {
return map.getVisibleDataOverlays().then(function (visibleDataOverlays) {
- return ServerConnector.getImageDownloadUrl({
+ return map.getServerConnector().getImageDownloadUrl({
polygonString: map.getSelectedPolygon(),
modelId: map.getActiveSubmapId(),
handlerClass: converter.handler,
- backgroundOverlayId: map.getGoogleMap().getMapTypeId(),
- zoomLevel: map.getGoogleMap().getZoom(),
+ backgroundOverlayId: map.getBackgroundDataOverlay().getId(),
+ zoomLevel: map.getZoom(),
overlayIds: extractDataOverlayIds(visibleDataOverlays)
});
}).then(function (url) {
return self.downloadFile(url);
- }).then(null, GuiConnector.alert);
+ }).catch(GuiConnector.alert);
});
});
return submenu;
@@ -142,7 +148,7 @@ ContextMenu.prototype.createExportAsImageSubmenu = function () {
ContextMenu.prototype.createExportAsModelSubmenu = function () {
var self = this;
- return ServerConnector.getModelConverters().then(function (converters) {
+ return self.getMap().getServerConnector().getModelConverters().then(function (converters) {
var li = Functions.createElement({
type: "li"
});
@@ -156,17 +162,17 @@ ContextMenu.prototype.createExportAsModelSubmenu = function () {
converters.forEach(function (converter) {
submenu.addOption(converter.name, function () {
return map.getVisibleDataOverlays().then(function (visibleDataOverlays) {
- return ServerConnector.getModelDownloadUrl({
+ return map.getServerConnector().getModelDownloadUrl({
polygonString: map.getSelectedPolygon(),
modelId: map.getActiveSubmapId(),
handlerClass: converter.handler,
- backgroundOverlayId: map.getGoogleMap().getMapTypeId(),
- zoomLevel: map.getGoogleMap().getZoom(),
+ backgroundOverlayId: map.getBackgroundDataOverlay().getId(),
+ zoomLevel: map.getZoom(),
overlayIds: extractDataOverlayIds(visibleDataOverlays)
});
}).then(function (url) {
return self.downloadFile(url);
- }).then(null, GuiConnector.alert);
+ }).catch(GuiConnector.alert);
});
});
return submenu;
diff --git a/frontend-js/src/main/js/gui/MapContextMenu.js b/frontend-js/src/main/js/gui/MapContextMenu.js
index 334d4333d01b6675a4d1b4cf56573b83f800892b..4e1e798bb30ccbd43924141e4fd62256bdddbed5 100644
--- a/frontend-js/src/main/js/gui/MapContextMenu.js
+++ b/frontend-js/src/main/js/gui/MapContextMenu.js
@@ -24,7 +24,7 @@ MapContextMenu.prototype._createMapContextMenuGui = function() {
return self.getMap().openCommentDialog();
});
self.addOption("Select mode", function() {
- return self.getMap().turnOnOffDrawing();
+ return self.getMap().toggleDrawing();
});
};
diff --git a/frontend-js/src/main/js/gui/OverviewDialog.js b/frontend-js/src/main/js/gui/OverviewDialog.js
index 287f4162d933c18b1b0a2ef206f71057576e1cca..ae3a5c4023cab0f5cca9978a6c536001c853fb5f 100644
--- a/frontend-js/src/main/js/gui/OverviewDialog.js
+++ b/frontend-js/src/main/js/gui/OverviewDialog.js
@@ -4,6 +4,7 @@
var AbstractGuiElement = require('./AbstractGuiElement');
var GuiConnector = require('../GuiConnector');
+var Point = require('../map/canvas/Point');
var functions = require('../Functions');
var logger = require('../logger');
@@ -13,7 +14,7 @@ function OverviewDialog(params) {
var self = this;
$(self.getElement()).dialog({
autoOpen: false,
- resizable: false,
+ resizable: false
});
}
@@ -97,10 +98,7 @@ OverviewDialog.prototype.showOverview = function (overviewImageId) {
var xNormal = xPosition / currentRatio;
var yNormal = yPosition / currentRatio;
- var point = {
- x: xNormal,
- y: yNormal
- };
+ var point = new Point(xNormal, yNormal);
var link = null;
for (var i = 0; i < self.overviewImage.links.length; i++) {
@@ -149,10 +147,7 @@ OverviewDialog.prototype.showOverview = function (overviewImageId) {
var xNormal = position.x / currentRatio;
var yNormal = position.y / currentRatio;
- var point = {
- x: xNormal,
- y: yNormal
- };
+ var point = new Point(xNormal, yNormal);
if (self.overviewImage.mousePos.x !== position.x || self.overviewImage.mousePos.y !== position.y) {
self.overviewImage.mousePos = position;
@@ -184,12 +179,12 @@ OverviewDialog.prototype.openLink = function (link) {
var map = self.getMap();
if (link.type === "OverviewModelLink") {
logger.debug("Opening model from overview. ModelId: " + link.modelLinkId);
- logger.debug("link coordinates [" + link.idObject + "]: ", link.modelPoint);
+ logger.debug("link coordinates [" + link.idObject + "]: " + link.modelPoint);
map.openSubmap(link.modelLinkId);
var submap = map.getSubmapById(link.modelLinkId);
- logger.debug("zoom [" + link.idObject + "]: ", link.zoomLevel + submap.getMinZoom());
- submap.setCenter(submap.fromPointToLatLng(link.modelPoint));
+ logger.debug("zoom [" + link.idObject + "]: " + link.zoomLevel + submap.getMinZoom());
+ submap.setCenter(new Point(link.modelPoint));
submap.setZoom(link.zoomLevel + submap.getMinZoom());
$(self.getElement()).dialog("close");
diff --git a/frontend-js/src/main/js/gui/Panel.js b/frontend-js/src/main/js/gui/Panel.js
index d4a1129b38d61d57078b1bab03267e0dcb85536f..5d9f683e9556dc4d1c155959367597057e383ac8 100644
--- a/frontend-js/src/main/js/gui/Panel.js
+++ b/frontend-js/src/main/js/gui/Panel.js
@@ -11,6 +11,21 @@ var Functions = require('../Functions');
var logger = require('../logger');
var xss = require('xss');
+/**
+ *
+ * @param {Configuration} [params.configuration]
+ * @param {HTMLElement} params.element
+ * @param {Project} params.project
+ * @param {CustomMap} params.customMap
+ * @param {string} params.panelName
+ * @param {boolean} params.scrollable
+ * @param {string} [params.helpTip]
+ * @param params.parent
+ *
+ * @constructor
+ * @extends AbstractGuiElement
+ */
+
function Panel(params) {
AbstractGuiElement.call(this, params);
@@ -84,6 +99,10 @@ Panel.prototype.setMap = function (map) {
this._map = map;
};
+/**
+ *
+ * @returns {CustomMap}
+ */
Panel.prototype.getMap = function () {
return this._map;
};
@@ -96,6 +115,10 @@ Panel.prototype.getPanelName = function () {
return this._panelName;
};
+/**
+ *
+ * @param {HTMLElement} element
+ */
Panel.prototype.setElement = function (element) {
if (element === undefined || element === null) {
throw new Error("DOM Element must be defined");
@@ -103,6 +126,10 @@ Panel.prototype.setElement = function (element) {
this._element = element;
};
+/**
+ *
+ * @returns {HTMLElement}
+ */
Panel.prototype.getElement = function () {
return this._element;
};
@@ -196,7 +223,7 @@ Panel.prototype.openDialog = function (content, options) {
contentDiv.style.display = "none";
$(this).dialog('destroy');
},
- dialogClass: options.className,
+ dialogClass: options.className
});
this.assignDialogOptions(div, options);
diff --git a/frontend-js/src/main/js/gui/PanelControlElementType.js b/frontend-js/src/main/js/gui/PanelControlElementType.js
index 6b2347f96d4f2346a328c7003459b665380a0e32..dd7610f6830145ebee9d41cc7f9e0c973af60bcd 100644
--- a/frontend-js/src/main/js/gui/PanelControlElementType.js
+++ b/frontend-js/src/main/js/gui/PanelControlElementType.js
@@ -54,7 +54,7 @@ var PanelControlElementType = {
MENU_SHOW_OVERVIEW_BUTTON : "MENU_SHOW_OVERVIEW_BUTTON",
MENU_VERSION_DIV : "MENU_VERSION_DIV",
- FOOTER_LOADING_DIV : "FOOTER_LOADING_DIV",
+ FOOTER_LOADING_DIV : "FOOTER_LOADING_DIV"
};
module.exports = PanelControlElementType;
diff --git a/frontend-js/src/main/js/gui/SelectionContextMenu.js b/frontend-js/src/main/js/gui/SelectionContextMenu.js
index 8af409642f530d32203ec481d3e3ef3d981c31e4..16a7629ebbdc3a33f2660bb6c45291d8383fde83 100644
--- a/frontend-js/src/main/js/gui/SelectionContextMenu.js
+++ b/frontend-js/src/main/js/gui/SelectionContextMenu.js
@@ -16,21 +16,23 @@ function SelectionContextMenu(params) {
SelectionContextMenu.prototype = Object.create(ContextMenu.prototype);
SelectionContextMenu.prototype.constructor = SelectionContextMenu;
-SelectionContextMenu.prototype.init = function() {
+SelectionContextMenu.prototype.init = function () {
var self = this;
- return self.createExportAsImageSubmenu().then(function(submenu){
+ return self.createExportAsImageSubmenu().then(function (submenu) {
self.addOption(submenu);
return self.createExportAsModelSubmenu();
- }).then(function(submenu){
+ }).then(function (submenu) {
self.addOption(submenu);
});
};
-SelectionContextMenu.prototype._createSelectionContextMenuGui = function() {
+SelectionContextMenu.prototype._createSelectionContextMenuGui = function () {
var self = this;
- self.addOption("Remove Selection", function() {
+ self.addOption("Remove Selection", function () {
self.getMap().removeSelection();
- self.getMap().turnOnOffDrawing();
+ if (self.getMap().isDrawingOn()) {
+ self.getMap().toggleDrawing();
+ }
});
};
diff --git a/frontend-js/src/main/js/gui/admin/AddProjectDialog.js b/frontend-js/src/main/js/gui/admin/AddProjectDialog.js
index a1de59f8976be870218c2bf25d60fd637b19a37d..4d2999451332b528cc14989f03e609a3e39d748e 100644
--- a/frontend-js/src/main/js/gui/admin/AddProjectDialog.js
+++ b/frontend-js/src/main/js/gui/admin/AddProjectDialog.js
@@ -209,6 +209,19 @@ AddProjectDialog.prototype.createGeneralTabContent = function () {
table.appendChild(self.createRow([guiUtils.createLabel("File format: "), fileFormatSelect]));
+ var mapCanvasTypeSelect = Functions.createElement({
+ type: "select",
+ name: "project-map-canvas-type"
+ });
+
+ table.appendChild(self.createRow([guiUtils.createLabel("Map canvas type: "), mapCanvasTypeSelect]));
+
+ table.appendChild(self.createCheckboxRow({
+ labelName: "I agree to <a target='_license' href='https://developers.google.com/maps/terms'>Google Maps APIs Terms of Service</a>:",
+ defaultValue: false,
+ inputName: "project-google-maps-license"
+ }));
+
table.appendChild(self.createInputRow({
labelName: "ProjectId:",
defaultValue: "id",
@@ -310,7 +323,7 @@ AddProjectDialog.prototype.createGeneralTabContent = function () {
onclick: function () {
return self.onSaveClicked().then(function () {
return self.close();
- }, GuiConnector.alert);
+ }).catch(GuiConnector.alert);
},
xss: false
});
@@ -416,8 +429,8 @@ AddProjectDialog.prototype.createRow = function (elements) {
result.appendChild(element);
}
return result;
-
};
+
AddProjectDialog.prototype.createOverlaysTab = function (tabMenuDiv, tabContentDiv) {
var self = this;
self.addTab({
@@ -692,27 +705,18 @@ AddProjectDialog.prototype.createOverviewImagesTabContent = function () {
return result;
};
+/**
+ *
+ * @returns {PromiseLike}
+ */
AddProjectDialog.prototype.init = function () {
var self = this;
return ServerConnector.getConfiguration().then(function (configuration) {
var select = $("[name='project-format']", self.getElement())[0];
- var option = Functions.createElement({
- type: "option",
- content: "---"
- });
- option.selected = true;
- select.appendChild(option);
- var converters = configuration.getModelConverters();
- for (var i = 0; i < converters.length; i++) {
- var converter = converters[i];
- option = Functions.createElement({
- type: "option",
- content: converter.name
- });
- option.data = converter.extension;
- option.value = converter.handler;
- select.appendChild(option);
- }
+ self._fillProjectFormatSelectOptions(select, configuration);
+
+ select = $("[name='project-map-canvas-type']", self.getElement())[0];
+ self._fillMapCanvasTypeSelectOptions(select, configuration);
return ServerConnector.getLoggedUser();
}).then(function (user) {
self.setNotifyEmail(user.getEmail());
@@ -725,6 +729,73 @@ AddProjectDialog.prototype.init = function () {
});
};
+/**
+ *
+ * @param {HTMLElement} select
+ * @param {Configuration} configuration
+ * @private
+ */
+AddProjectDialog.prototype._fillProjectFormatSelectOptions = function (select, configuration) {
+ var option = Functions.createElement({
+ type: "option",
+ content: "---"
+ });
+ option.selected = true;
+ select.appendChild(option);
+ var converters = configuration.getModelConverters();
+ for (var i = 0; i < converters.length; i++) {
+ var converter = converters[i];
+ option = Functions.createElement({
+ type: "option",
+ content: converter.name
+ });
+ option.data = converter.extension;
+ option.value = converter.handler;
+ select.appendChild(option);
+ }
+};
+
+/**
+ *
+ * @param {HTMLElement} select
+ * @param {Configuration} configuration
+ * @private
+ */
+AddProjectDialog.prototype._fillMapCanvasTypeSelectOptions = function (select, configuration) {
+ var self = this;
+ var mapCanvasTypes = configuration.getMapCanvasTypes();
+
+ var licenceCheckbox = $("[name='project-google-maps-license']", self.getElement())[0];
+ var licenceDiv = licenceCheckbox.parentElement.parentElement.parentElement;
+
+ for (var i = 0; i < mapCanvasTypes.length; i++) {
+ var mapCanvasType = mapCanvasTypes[i];
+ var option = Functions.createElement({
+ type: "option",
+ content: mapCanvasType.name,
+ value: mapCanvasType.id
+ });
+ if (mapCanvasType.id === "OPEN_LAYERS") {
+ option.selected = true;
+ $(licenceDiv).css("display", "none");
+ }
+ select.appendChild(option);
+ }
+
+
+ $(select).change(function () {
+ $("option:selected", select).each(function () {
+ if ($(this).val() === "GOOGLE_MAPS_API") {
+ $(licenceDiv).css("display", "table-row");
+ } else {
+ $(licenceDiv).css("display", "none");
+ }
+ $(licenceCheckbox).prop('checked', false);
+ });
+ });
+};
+
+
AddProjectDialog.prototype.bindProjectUploadPreferences = function (user, type, elementName) {
var element = $("[name='" + elementName + "']", this.getElement());
@@ -818,6 +889,19 @@ AddProjectDialog.prototype.processFile = function (file) {
AddProjectDialog.prototype.setFileContent = function (fileContent) {
this._fileContent = fileContent;
};
+
+AddProjectDialog.prototype.setLicenseAccepted = function (isLicenseAccepted) {
+ $("[name='project-google-maps-license']", this.getElement()).prop("checked", isLicenseAccepted);
+};
+
+/**
+ *
+ * @returns {boolean}
+ */
+AddProjectDialog.prototype.isLicenseAccepted = function () {
+ return $("[name='project-google-maps-license']", this.getElement()).is(":checked");
+};
+
AddProjectDialog.prototype.getFileContent = function () {
return this._fileContent;
};
@@ -826,6 +910,25 @@ AddProjectDialog.prototype.setProjectId = function (projectId) {
$("[name='project-id']", this.getElement()).val(projectId);
};
+/**
+ *
+ * @param {string} mapCanvasTypeId
+ */
+AddProjectDialog.prototype.setMapCanvasTypeId = function (mapCanvasTypeId) {
+ var select = $("[name='project-map-canvas-type']", this.getElement());
+ select.val(mapCanvasTypeId);
+ select.change();
+};
+
+/**
+ *
+ * @returns {string}
+ */
+AddProjectDialog.prototype.getMapCanvasTypeId = function () {
+ return $("[name='project-map-canvas-type']", this.getElement()).val();
+};
+
+
AddProjectDialog.prototype.getProjectId = function () {
return $("[name='project-id']", this.getElement()).val();
};
@@ -950,6 +1053,7 @@ AddProjectDialog.prototype.onSaveClicked = function () {
"disease": self.getDisease(),
"version": self.getVersion(),
"organism": self.getOrganism(),
+ "mapCanvasType": self.getMapCanvasTypeId(),
"sbgn": self.isSbgn(),
"semantic-zoom": self.isSemanticZooming(),
"annotate": self.isAnnotateAutomatically(),
@@ -966,6 +1070,15 @@ AddProjectDialog.prototype.checkValidity = function () {
var self = this;
var isValid = true;
var error = "<b>Some data is missing.</b><ul>";
+
+ var mapCanvasTypeId = self.getMapCanvasTypeId();
+ if (mapCanvasTypeId === "GOOGLE_MAPS_API") {
+ if (!self.isLicenseAccepted()) {
+ isValid = false;
+ error += "<li>Please accept Google Maps License when choosing Google Maps API engine</li>";
+ }
+ }
+
if (self.getFileContent() === null || self.getFileContent() === undefined) {
error += "<li>Please select file before uploading</li>";
isValid = false;
@@ -976,7 +1089,7 @@ AddProjectDialog.prototype.checkValidity = function () {
isValid = false;
}
var projectId = self.getProjectId();
- if (!(/^[a-z0-9A-Z\-\_]+$/.test(projectId))) {
+ if (!(/^[a-z0-9A-Z\-_]+$/.test(projectId))) {
error += "<li>projectId can contain only alphanumeric characters and -_</li>";
isValid = false;
}
@@ -1058,17 +1171,17 @@ AddProjectDialog.prototype.createZipEntry = function (jsZipEntry, zipObject) {
return null;
}
var filename = jsZipEntry.name.toLowerCase();
- var type = null;
+ var type;
var data = {};
var processingPromise = Promise.resolve();
- if (filename.startsWith("submaps")) {
+ if (filename.indexOf("submaps") === 0) {
type = "MAP";
if (filename.endsWith("mapping.xml")) {
data.mapping = true;
}
- } else if (filename.startsWith("images")) {
+ } else if (filename.indexOf("images") === 0) {
type = "IMAGE";
- } else if (filename.startsWith("layouts") || filename.startsWith("overlays")) {
+ } else if (filename.indexOf("layouts") === 0 || filename.indexOf("overlays") === 0) {
type = "OVERLAY";
processingPromise = zipObject.file(jsZipEntry.name).async("string").then(function (content) {
var overlayParser = new OverlayParser();
@@ -1142,11 +1255,13 @@ AddProjectDialog.prototype.setZipEntries = function (entries) {
AddProjectDialog.prototype.isIgnoredZipEntry = function (filename) {
var lowercaseString = filename.toLowerCase();
- if (lowercaseString.startsWith("__macosx") || lowercaseString.startsWith(".ds_store")) {
+ // noinspection SpellCheckingInspection
+ if (lowercaseString.indexOf("__macosx") === 0) {
+ return true;
+ } else if (lowercaseString.indexOf(".ds_store") === 0) {
return true;
- } else {
- return false;
}
+ return false;
};
AddProjectDialog.prototype.getEntryByFilename = function (filename) {
diff --git a/frontend-js/src/main/js/gui/admin/ChooseAnnotatorsDialog.js b/frontend-js/src/main/js/gui/admin/ChooseAnnotatorsDialog.js
index 2282b96c74a7b84883b7b53e89072cb71d27bc33..e86ed8f7880052202cfb6125d358ea910913398b 100644
--- a/frontend-js/src/main/js/gui/admin/ChooseAnnotatorsDialog.js
+++ b/frontend-js/src/main/js/gui/admin/ChooseAnnotatorsDialog.js
@@ -7,13 +7,10 @@ var GuiConnector = require("../../GuiConnector");
var MultiCheckboxList = require("multi-checkbox-list");
var UserPreferences = require("../../map/data/UserPreferences");
-var InvalidArgumentError = require('../../InvalidArgumentError');
-
var Functions = require('../../Functions');
+// noinspection JSUnusedLocalSymbols
var logger = require('../../logger');
-var Promise = require("bluebird");
-
function ChooseAnnotatorsDialog(params) {
AbstractGuiElement.call(this, params);
var self = this;
@@ -170,8 +167,6 @@ ChooseAnnotatorsDialog.prototype.setElementType = function (elementType) {
var selectedAnnotators = user.getPreferences().getElementAnnotators(elementType.className);
- var selectedValues = [];
-
var entries = [];
for (i = 0; i < annotators.length; i++) {
@@ -317,7 +312,7 @@ ChooseAnnotatorsDialog.prototype.setElementType = function (elementType) {
});
paramValue.checked = (existingParamValue && existingParamValue === 'true');
} else {
- throw new InvalidAlgorithmError("Unknown annotator parameter type");
+ throw new Error("Unknown annotator parameter type");
}
paramElement.appendChild(paramValue);
diff --git a/frontend-js/src/main/js/gui/admin/CommentsAdminPanel.js b/frontend-js/src/main/js/gui/admin/CommentsAdminPanel.js
index db92b6daae320701dae726054443ad23ce8a40bb..c7154e3cc0e66a5ba7c8f93dae378a457867fada 100644
--- a/frontend-js/src/main/js/gui/admin/CommentsAdminPanel.js
+++ b/frontend-js/src/main/js/gui/admin/CommentsAdminPanel.js
@@ -128,14 +128,13 @@ CommentsAdminPanel.prototype.commentToTableRow = function (comment) {
email = "N/A";
}
- var row = [comment.getId(), //
+ return [comment.getId(), //
xss(title), //
xss(author), //
xss(email), //
xss(comment.getContent()), //
remove, //
toYesNo(comment.isPinned())];
- return row;
};
CommentsAdminPanel.prototype.destroy = function () {
diff --git a/frontend-js/src/main/js/gui/admin/EditProjectDialog.js b/frontend-js/src/main/js/gui/admin/EditProjectDialog.js
index b65a1d542b9a1646f678488c5a9d5f7930a03f54..dc3e4c6681148590e707f5f9075ed2aab1ce43b1 100644
--- a/frontend-js/src/main/js/gui/admin/EditProjectDialog.js
+++ b/frontend-js/src/main/js/gui/admin/EditProjectDialog.js
@@ -9,6 +9,7 @@ var Annotation = require('../../map/data/Annotation');
var CommentsTab = require('./CommentsAdminPanel');
var GuiConnector = require('../../GuiConnector');
var PrivilegeType = require('../../map/data/PrivilegeType');
+var ValidationError = require("../../ValidationError");
var Functions = require('../../Functions');
// noinspection JSUnusedLocalSymbols
@@ -113,7 +114,7 @@ EditProjectDialog.prototype.addTab = function (params) {
navigationObject: navLi,
navigationBar: params.tabMenuDiv
});
- contentDiv.style.overflow = "auto";
+ $(contentDiv).css("overflow","auto");
if (params.content !== undefined) {
contentDiv.appendChild(params.content);
@@ -157,12 +158,52 @@ EditProjectDialog.prototype.createGeneralTabContent = function () {
style: "display:table-cell",
content: "ProjectId"
}));
- projectIdRow.appendChild(new Functions.createElement({
+ projectIdRow.appendChild(Functions.createElement({
type: "div",
style: "display:table-cell",
content: project.getProjectId()
}));
+ var mapCanvasTypeRow = Functions.createElement({
+ type: "div",
+ style: "display:table-row"
+ });
+ table.appendChild(mapCanvasTypeRow);
+ mapCanvasTypeRow.appendChild(Functions.createElement({
+ type: "div",
+ style: "display:table-cell",
+ content: "Map canvas type: "
+ }));
+ mapCanvasTypeRow.appendChild(Functions.createElement({
+ type: "div",
+ style: "display:table-cell",
+ content: Functions.createElement({
+ type: "select",
+ name: "project-map-canvas-type"
+ })
+ }));
+
+ var googleLicenseRow = Functions.createElement({
+ type: "div",
+ style: "display:table-row"
+ });
+ table.appendChild(googleLicenseRow);
+ googleLicenseRow.appendChild(Functions.createElement({
+ type: "div",
+ style: "display:table-cell",
+ content: "I agree to <a target='_license' href='https://developers.google.com/maps/terms'>Google Maps APIs Terms of Service</a>: ",
+ xss: false
+ }));
+ googleLicenseRow.appendChild(Functions.createElement({
+ type: "div",
+ style: "display:table-cell",
+ content: Functions.createElement({
+ type: "input",
+ inputType: "checkbox",
+ name: "project-google-maps-license"
+ })
+ }));
+
var nameRow = new Functions.createElement({
type: "div",
style: "display:table-row"
@@ -548,6 +589,42 @@ EditProjectDialog.prototype.init = function () {
}).then(function () {
return self.refreshComments();
}).then(function () {
+ var configuration = self.getConfiguration();
+ var mapCanvasTypes = configuration.getMapCanvasTypes();
+ var select = $("[name='project-map-canvas-type']", self.getElement())[0];
+ var licenceCheckbox = $("[name='project-google-maps-license']", self.getElement())[0];
+ var licenceDiv = licenceCheckbox.parentElement.parentElement;
+
+ for (var i = 0; i < mapCanvasTypes.length; i++) {
+ var mapCanvasType = mapCanvasTypes[i];
+ var option = Functions.createElement({
+ type: "option",
+ content: mapCanvasType.name,
+ value: mapCanvasType.id
+ });
+ if (mapCanvasType.id === self.getProject().getMapCanvasType()) {
+ option.selected = true;
+ if (mapCanvasType.id === "GOOGLE_MAPS_API") {
+ $(licenceDiv).css("display", "table-row");
+ self.setLicenseAccepted(true);
+ } else {
+ $(licenceDiv).css("display", "none");
+ self.setLicenseAccepted(false);
+ }
+ }
+ select.appendChild(option);
+ }
+ $(select).change(function () {
+ $("option:selected", select).each(function () {
+ if ($(this).val() === "GOOGLE_MAPS_API") {
+ $(licenceDiv).css("display", "table-row");
+ } else {
+ $(licenceDiv).css("display", "none");
+ }
+ self.setLicenseAccepted(false);
+ });
+ });
+
$(window).trigger('resize');
});
};
@@ -784,18 +861,45 @@ var prepareMiriamData = function (type, resource) {
}
};
+/**
+ *
+ * @returns {PromiseLike}
+ */
EditProjectDialog.prototype.onSaveClicked = function () {
var self = this;
var project = self.getProject();
var element = self.getElement();
- project.setName($("[name='projectName']", element)[0].value);
- project.setVersion($("[name='projectVersion']", element)[0].value);
- project.setNotifyEmail($("[name='projectNotifyEmail']", element)[0].value);
- var organism = prepareMiriamData("TAXONOMY", $("[name='projectOrganism']", element)[0].value);
- project.setOrganism(organism);
- var disease = prepareMiriamData("MESH_2012", $("[name='projectDisease']", element)[0].value);
- project.setDisease(disease);
- return ServerConnector.updateProject(project);
+ return self.checkValidity().then(function () {
+ project.setName($("[name='projectName']", element)[0].value);
+ project.setVersion($("[name='projectVersion']", element)[0].value);
+ project.setNotifyEmail($("[name='projectNotifyEmail']", element)[0].value);
+ var organism = prepareMiriamData("TAXONOMY", $("[name='projectOrganism']", element)[0].value);
+ project.setOrganism(organism);
+ var disease = prepareMiriamData("MESH_2012", $("[name='projectDisease']", element)[0].value);
+ project.setDisease(disease);
+ project.setMapCanvasType(self.getMapCanvasTypeId());
+ return ServerConnector.updateProject(project);
+ });
+};
+
+EditProjectDialog.prototype.checkValidity = function () {
+ var self = this;
+ var isValid = true;
+ var error = "<b>Some data is missing.</b><ul>";
+
+ var mapCanvasTypeId = self.getMapCanvasTypeId();
+ if (mapCanvasTypeId === "GOOGLE_MAPS_API") {
+ if (!self.isLicenseAccepted()) {
+ isValid = false;
+ error += "<li>Please accept Google Maps License when choosing Google Maps API engine</li>";
+ }
+ }
+
+ if (isValid) {
+ return Promise.resolve(true);
+ } else {
+ return Promise.reject(new ValidationError(error));
+ }
};
EditProjectDialog.prototype.close = function () {
var self = this;
@@ -905,5 +1009,35 @@ EditProjectDialog.prototype.destroy = function () {
}
};
+/**
+ *
+ * @param {string} mapCanvasTypeId
+ */
+EditProjectDialog.prototype.setMapCanvasTypeId = function (mapCanvasTypeId) {
+ var select = $("[name='project-map-canvas-type']", this.getElement());
+ select.val(mapCanvasTypeId);
+ select.change();
+};
+
+/**
+ *
+ * @returns {string}
+ */
+EditProjectDialog.prototype.getMapCanvasTypeId = function () {
+ return $("[name='project-map-canvas-type']", this.getElement()).val();
+};
+
+
+EditProjectDialog.prototype.setLicenseAccepted = function (isLicenseAccepted) {
+ $("[name='project-google-maps-license']", this.getElement()).prop("checked", isLicenseAccepted);
+};
+
+/**
+ *
+ * @returns {boolean}
+ */
+EditProjectDialog.prototype.isLicenseAccepted = function () {
+ return $("[name='project-google-maps-license']", this.getElement()).is(":checked");
+};
module.exports = EditProjectDialog;
diff --git a/frontend-js/src/main/js/gui/admin/EditUserDialog.js b/frontend-js/src/main/js/gui/admin/EditUserDialog.js
index 50b13ce3e60f47f25a471b2a64fa98e699b7a7b5..6b631121bd8f81047778829264d5299aaed40cd0 100644
--- a/frontend-js/src/main/js/gui/admin/EditUserDialog.js
+++ b/frontend-js/src/main/js/gui/admin/EditUserDialog.js
@@ -126,7 +126,7 @@ EditUserDialog.prototype.addTab = function (params) {
navigationBar: params.tabMenuDiv
});
- contentDiv.style.overflow = "auto";
+ $(contentDiv).css("overflow","auto");
if (params.content !== undefined) {
contentDiv.appendChild(params.content);
}
diff --git a/frontend-js/src/main/js/gui/admin/LogListDialog.js b/frontend-js/src/main/js/gui/admin/LogListDialog.js
index f0f341b34c451375ccce184afcb929c4cbbf3c11..14dd795f50b5b0e03ac7c6dfad6a3659d776c7b7 100644
--- a/frontend-js/src/main/js/gui/admin/LogListDialog.js
+++ b/frontend-js/src/main/js/gui/admin/LogListDialog.js
@@ -112,13 +112,11 @@ LogListDialog.prototype.downloadAll = function (data, callback) {
projectId: self._projectId,
level: self._level
}).then(function (logEntries) {
- var response = "";
var tmp = [];
for (var i = 0; i < logEntries.data.length; i++) {
tmp.push(logEntries.data[i].content);
}
- response = tmp.join("\n");
- return response;
+ return tmp.join("\n");
});
};
diff --git a/frontend-js/src/main/js/gui/export/AbstractExportPanel.js b/frontend-js/src/main/js/gui/export/AbstractExportPanel.js
index 61eba919ccc10f13c675f56b936e2c595458f974..d18f91310c421d3350a7b9e44e19123f6639fe51 100644
--- a/frontend-js/src/main/js/gui/export/AbstractExportPanel.js
+++ b/frontend-js/src/main/js/gui/export/AbstractExportPanel.js
@@ -98,7 +98,7 @@ AbstractExportPanel.prototype._createSelectTypeDiv = function (elementTypes) {
});
typeDiv.appendChild(Functions.createElement({
type: "h4",
- content: " TYPE:",
+ content: " TYPE:"
}));
var choicesContainer = Functions.createElement({
type: "ul",
@@ -446,8 +446,7 @@ AbstractExportPanel.prototype.createResponseHeader = function (columns, miriamTy
var miriamType = miriamTypes[i];
stringBuilder.push(miriamType.getCommonName());
}
- var result = stringBuilder.join("\t");
- return result;
+ return stringBuilder.join("\t");
};
diff --git a/frontend-js/src/main/js/gui/export/ElementExportPanel.js b/frontend-js/src/main/js/gui/export/ElementExportPanel.js
index e07f58e4ab6e55852c47a4351c05fac21bbe1a1c..2d0c3028e9ba97c227f248d7ab5ee0ee3f58d0b6 100644
--- a/frontend-js/src/main/js/gui/export/ElementExportPanel.js
+++ b/frontend-js/src/main/js/gui/export/ElementExportPanel.js
@@ -73,7 +73,7 @@ ElementExportPanel.prototype.createResponseString = function () {
type: types,
complete: true,
includedCompartmentIds: includedCompartmentIds,
- excludedCompartmentIds: excludedCompartmentIds,
+ excludedCompartmentIds: excludedCompartmentIds
}));
}
return Promise.all(promises);
@@ -128,67 +128,66 @@ ElementExportPanel.prototype.createResponseRow = function (alias, columns, miria
}
stringBuilder.push(value);
}
- var result = stringBuilder.join("\t");
- return result;
+ return stringBuilder.join("\t");
};
ElementExportPanel.prototype.getAllColumns = function () {
return [{
"columnName": "id",
"method": "getId",
- "name": "Id",
+ "name": "Id"
}, {
"columnName": "name",
"method": "getName",
- "name": "Name",
+ "name": "Name"
}, {
"columnName": "description",
"method": "getDescription",
- "name": "Description",
+ "name": "Description"
}, {
"columnName": "modelId",
"method": "getModelId",
- "name": "Model",
+ "name": "Model"
}, {
"columnName": "type",
"method": "getType",
- "name": "Type",
+ "name": "Type"
}, {
"columnName": "complexId",
"method": "getComplexId",
- "name": "Complex",
+ "name": "Complex"
}, {
"columnName": "compartmentId",
"method": "getCompartmentId",
- "name": "Compartment",
+ "name": "Compartment"
}, {
"columnName": "charge",
"method": "getCharge",
- "name": "Charge",
+ "name": "Charge"
}, {
"columnName": "symbol",
"method": "getSymbol",
- "name": "Symbol",
+ "name": "Symbol"
}, {
"columnName": "fullName",
"method": "getFullName",
- "name": "Full name",
+ "name": "Full name"
}, {
"columnName": "abbreviation",
"method": "getAbbreviation",
- "name": "Abbreviation",
+ "name": "Abbreviation"
}, {
"columnName": "formula",
"method": "getFormula",
- "name": "Formula",
+ "name": "Formula"
}, {
"columnName": "synonyms",
"method": "getSynonyms",
- "name": "Synonyms",
+ "name": "Synonyms"
}, {
"columnName": "formerSymbols",
"method": "getFormerSymbols",
- "name": "Former symbols",
+ "name": "Former symbols"
}, {
"columnName": "references",
"method": "getReferences",
@@ -200,16 +199,16 @@ ElementExportPanel.prototype.getAllColumns = function () {
stringBuilder.push(reference.getType() + ":" + reference.getResource());
}
return stringBuilder.join(",");
- },
+ }
}, {
"columnName": "linkedSubmodelId",
"method": "getLinkedSubmodelId",
- "name": "Linked submodel",
+ "name": "Linked submodel"
}, {
"columnName": "elementId",
"method": "getElementId",
- "name": "Element external id",
- },];
+ "name": "Element external id"
+ }];
};
diff --git a/frontend-js/src/main/js/gui/export/NetworkExportPanel.js b/frontend-js/src/main/js/gui/export/NetworkExportPanel.js
index 7fb473113b4153efe9415f62fadaab3d5dfe31f9..d34f0b40a9b60d9e9e6368ae5e63b0cd9bcb718e 100644
--- a/frontend-js/src/main/js/gui/export/NetworkExportPanel.js
+++ b/frontend-js/src/main/js/gui/export/NetworkExportPanel.js
@@ -179,7 +179,7 @@ NetworkExportPanel.prototype.createResponseString = function () {
type: types,
complete: true,
includedCompartmentIds: includedCompartmentIds,
- excludedCompartmentIds: excludedCompartmentIds,
+ excludedCompartmentIds: excludedCompartmentIds
}));
}
return Promise.all(promises);
@@ -245,8 +245,7 @@ NetworkExportPanel.prototype.createResponseRow = function (reaction, columns, mi
}
stringBuilder.push(value);
}
- var result = stringBuilder.join("\t");
- return result;
+ return stringBuilder.join("\t");
};
module.exports = NetworkExportPanel;
diff --git a/frontend-js/src/main/js/gui/leftPanel/AbstractDbPanel.js b/frontend-js/src/main/js/gui/leftPanel/AbstractDbPanel.js
index 6589ecc001536d09984f33ac5cf8066afd8b2e58..73fa48f126b94db5707701045588809b343fc77f 100644
--- a/frontend-js/src/main/js/gui/leftPanel/AbstractDbPanel.js
+++ b/frontend-js/src/main/js/gui/leftPanel/AbstractDbPanel.js
@@ -11,6 +11,13 @@ var PanelControlElementType = require('../PanelControlElementType');
var logger = require('../../logger');
var Functions = require('../../Functions');
+/**
+ *
+ * @param {string} params.placeholder
+ * @param {string} params.panelName
+ * @constructor
+ * @extends Panel
+ */
function AbstractPanel(params) {
Panel.call(this, params);
var self = this;
@@ -170,6 +177,10 @@ AbstractPanel.prototype.setOverlayDb = function (overlayDb) {
this._overlayDb = overlayDb;
};
+/**
+ *
+ * @returns {AbstractDbOverlay}
+ */
AbstractPanel.prototype.getOverlayDb = function () {
return this._overlayDb;
};
@@ -358,7 +369,7 @@ AbstractPanel.prototype.computeAutocompleteDictionary = function (queries) {
for (k = 0; k < 5; k++) {
if (k + i >= queries.length) {
break;
- } else if (queries[k + i].toLowerCase().startsWith(substring.toLowerCase())) {
+ } else if (queries[k + i].toLowerCase().indexOf(substring.toLowerCase()) === 0) {
list.push(queries[k + i]);
}
}
@@ -373,7 +384,7 @@ AbstractPanel.prototype.computeAutocompleteDictionary = function (queries) {
for (var startSubstring = 1; startSubstring < mainString.length; startSubstring++) {
for (var endSubstring = startSubstring + 1; endSubstring <= mainString.length; endSubstring++) {
substring = mainString.substring(startSubstring, endSubstring);
- if (!mainString.startsWith(substring)) {
+ if (mainString.indexOf(substring) !== 0) {
if (result[substring] === undefined) {
result[substring] = [];
}
diff --git a/frontend-js/src/main/js/gui/leftPanel/ChemicalPanel.js b/frontend-js/src/main/js/gui/leftPanel/ChemicalPanel.js
index 35d60913fe28f1b620ed15f6df7d38d9914e3d4f..579599f37bf08ff04d7f457a460cc08dd3077123 100644
--- a/frontend-js/src/main/js/gui/leftPanel/ChemicalPanel.js
+++ b/frontend-js/src/main/js/gui/leftPanel/ChemicalPanel.js
@@ -9,7 +9,12 @@ var logger = require('../../logger');
var AbstractDbPanel = require('./AbstractDbPanel');
var PanelControlElementType = require('../PanelControlElementType');
-
+/**
+ *
+ * @param params
+ * @constructor
+ * @extends AbstractDbPanel
+ */
function ChemicalPanel(params) {
var self = this;
params.panelName = "chemical";
@@ -23,7 +28,7 @@ function ChemicalPanel(params) {
"Choose an appropriate MeSH code and provide it in the via the Admin section of this MINERVA platform. " +
"See User Manual for more details ");
} else {
- this.getControlElement(PanelControlElementType.SEARCH_LABEL).innerHTML = "SEARCH FOR TARGETS OF:";
+ self.getControlElement(PanelControlElementType.SEARCH_LABEL).innerHTML = "SEARCH FOR TARGETS OF:";
}
}
diff --git a/frontend-js/src/main/js/gui/leftPanel/DrugPanel.js b/frontend-js/src/main/js/gui/leftPanel/DrugPanel.js
index c7b0fe717e1662bcc78555a718618d6730416e83..ee96cfe765e6810c7b0c462c661f0e075dcdabf3 100644
--- a/frontend-js/src/main/js/gui/leftPanel/DrugPanel.js
+++ b/frontend-js/src/main/js/gui/leftPanel/DrugPanel.js
@@ -8,6 +8,12 @@ var logger = require('../../logger');
var AbstractDbPanel = require('./AbstractDbPanel');
var PanelControlElementType = require('../PanelControlElementType');
+/**
+ *
+ * @param params
+ * @constructor
+ * @extends AbstractDbPanel
+ */
function DrugPanel(params) {
params.panelName = "drug";
params.helpTip = '<p>source: <a target="_drugbank" href="http://www.drugbank.ca/">DrugBank</a> and '
@@ -16,12 +22,18 @@ function DrugPanel(params) {
params.placeholder = "drug, synonym, brand name";
AbstractDbPanel.call(this, params);
- this.getControlElement(PanelControlElementType.SEARCH_LABEL).innerHTML = "SEARCH FOR TARGETS OF:";
+ var self = this;
+ self.getControlElement(PanelControlElementType.SEARCH_LABEL).innerHTML = "SEARCH FOR TARGETS OF:";
}
DrugPanel.prototype = Object.create(AbstractDbPanel.prototype);
DrugPanel.prototype.constructor = DrugPanel;
+/**
+ *
+ * @param {Drug} drug
+ * @returns {HTMLDivElement}
+ */
DrugPanel.prototype.createPreamble = function (drug) {
var self = this;
var guiUtils = self.getGuiUtils();
diff --git a/frontend-js/src/main/js/gui/leftPanel/GuiUtils.js b/frontend-js/src/main/js/gui/leftPanel/GuiUtils.js
index 37de51895468fe6992f1f9cd35c4c32d98893bbc..e06c5307248d80076325708909f46e2c4b2230e3 100644
--- a/frontend-js/src/main/js/gui/leftPanel/GuiUtils.js
+++ b/frontend-js/src/main/js/gui/leftPanel/GuiUtils.js
@@ -83,8 +83,7 @@ GuiUtils.prototype.createChebiTree = function (label, value) {
return result;
};
GuiUtils.prototype.createSeparator = function () {
- var result = document.createElement("hr");
- return result;
+ return document.createElement("hr");
};
GuiUtils.prototype.createNewLine = function (count) {
@@ -233,12 +232,13 @@ GuiUtils.prototype.createAnnotationList = function (annotations, options) {
var annotators = this.getConfiguration().getAnnotators();
var annotatorsClassMapping = {};
var grouppedAnnotations = {};
+ var i;
if (groupAnnotations) {
- for (var i = 0; i < annotators.length; i++) {
+ for (i = 0; i < annotators.length; i++) {
annotatorsClassMapping[annotators[i].getClassName()] = annotators[i];
}
- for (var i = 0; i < annotations.length; i++) {
+ for (i = 0; i < annotations.length; i++) {
var clazz = annotations[i].getAnnotatorClassName();
if (!(clazz in grouppedAnnotations)) grouppedAnnotations[clazz] = [];
grouppedAnnotations[clazz].push(annotations[i])
@@ -259,8 +259,9 @@ GuiUtils.prototype.createAnnotationList = function (annotations, options) {
Object.keys(grouppedAnnotations).sort().forEach(function (annotatorClass) {
var groupContainer = createGroupContainer(inline, annotatorClass, annotatorsClassMapping, groupAnnotations);
+ var par;
if (inline) {
- var par = document.createElement("span");
+ par = document.createElement("span");
par.innerHTML = "(";
groupContainer.appendChild(par);
}
@@ -311,7 +312,7 @@ GuiUtils.prototype.createAnnotationList = function (annotations, options) {
}
if (inline) {
- var par = document.createElement("span");
+ par = document.createElement("span");
par.innerHTML = ")";
groupContainer.appendChild(par);
}
@@ -376,7 +377,7 @@ GuiUtils.prototype.createIcon = function (icon, onclickFunction) {
var img = document.createElement("img");
img.src = GuiConnector.getImgPrefix() + icon;
img.style.float = "left";
- img.hspace = "5";
+ img.hspace = 5;
if (onclickFunction !== undefined) {
img.onclick = onclickFunction;
}
diff --git a/frontend-js/src/main/js/gui/leftPanel/LeftPanel.js b/frontend-js/src/main/js/gui/leftPanel/LeftPanel.js
index aac93a0effb65c153f3eb5812d4ec0f8067b078a..5f89246359f276d7c4be3f500d0b11ebcf435a11 100644
--- a/frontend-js/src/main/js/gui/leftPanel/LeftPanel.js
+++ b/frontend-js/src/main/js/gui/leftPanel/LeftPanel.js
@@ -45,7 +45,7 @@ LeftPanel.prototype._createPanelGui = function () {
var header = new Header({
element: headerDiv,
customMap: self.getMap(),
- optionsMenu: true,
+ optionsMenu: true
});
self.getElement().appendChild(headerDiv);
@@ -164,8 +164,9 @@ LeftPanel.prototype.showElementDetails = function (element) {
}).siblings('.ui-dialog-titlebar').css("background", "gray");
}
- var openTabName = $("[name='tabView'] > ul li.active a > .maintabdiv")[0].innerHTML;
- var searchTabName = $("[name='tabView'] > ul li.active a > .maintabdiv")[1].innerHTML;
+ var openedTabs = $("[name='tabView'] > ul li.active a > .maintabdiv");
+ var openTabName = openedTabs[0].innerHTML;
+ var searchTabName = openedTabs[1].innerHTML;
var isPanelHidden = (self.getElement().style.display === "none");
if (isPanelHidden) {
openTabName = undefined;
diff --git a/frontend-js/src/main/js/gui/leftPanel/OverlayPanel.js b/frontend-js/src/main/js/gui/leftPanel/OverlayPanel.js
index 206634e95edfe4320a4249f8b1ef72416da24445..c538683bfd90e4d0d46cc0ac57b47951fc427bd8 100644
--- a/frontend-js/src/main/js/gui/leftPanel/OverlayPanel.js
+++ b/frontend-js/src/main/js/gui/leftPanel/OverlayPanel.js
@@ -44,13 +44,13 @@ function OverlayPanel(params) {
toggleOverlayPromise = self.getMap().hideDataOverlay(overlayId);
}
$(thisCheckbox).prop("disabled", true);
- return toggleOverlayPromise.then(null, GuiConnector.alert).finally(function () {
+ return toggleOverlayPromise.catch(GuiConnector.alert).finally(function () {
$(thisCheckbox).prop("disabled", false);
});
});
$(self.getElement()).on("click", "[name='overlayLink']", function () {
var overlayId = $(this).attr("data");
- self.getMap().openDataOverlay(overlayId);
+ return self.getMap().openDataOverlay(overlayId);
});
self.getMap().addListener("onBackgroundOverlayChange", function (e) {
var overlayId = e.arg.toString();
@@ -350,7 +350,7 @@ OverlayPanel.prototype.refresh = function (showDefault) {
}).then(function (customOverlays) {
if (!showDefault) {
- var id = self.getMap().getGoogleMap().getMapTypeId().replace(/\D/g, '');
+ var id = self.getMap().getBackgroundDataOverlay().getId();
selectedOverlay[id] = true;
}
diff --git a/frontend-js/src/main/js/gui/leftPanel/ProjectInfoPanel.js b/frontend-js/src/main/js/gui/leftPanel/ProjectInfoPanel.js
index 149d2c9c58fc2d9e21c72356792c922e8cb2b2bd..c981bc420c36799ea77e938bce6b771e01d811ee 100644
--- a/frontend-js/src/main/js/gui/leftPanel/ProjectInfoPanel.js
+++ b/frontend-js/src/main/js/gui/leftPanel/ProjectInfoPanel.js
@@ -89,23 +89,23 @@ ProjectInfoPanel.prototype._createInfoPanelGui = function () {
infoDiv.appendChild(infoTitle);
var dialogDiv = Functions.createElement({
- type: "div",
+ type: "div"
});
this.publicationListDialog = new PublicationListDialog({
customMap: self.getMap(),
- element: dialogDiv,
+ element: dialogDiv
});
dataTab = Functions.createElement({
- type: "ul",
+ type: "ul"
});
infoDiv.appendChild(dataTab);
var projectPublicationsText = Functions.createElement({
type: "span",
name: "projectPublicationsText",
- style: "font-family:FontAwesome; font-weight: normal;font-style: normal;cursor: pointer",
+ style: "font-family:FontAwesome; font-weight: normal;font-style: normal;cursor: pointer"
});
this.setControlElement(PanelControlElementType.INFO_PROJECT_PUBLICATIONS_TEXT, projectPublicationsText);
diff --git a/frontend-js/src/main/js/gui/leftPanel/PublicationListDialog.js b/frontend-js/src/main/js/gui/leftPanel/PublicationListDialog.js
index 1ff214195907236a9a830b04f52a3cc4cb391300..5f757ba484fe2ad422fa20bfe22f2ac035116678 100644
--- a/frontend-js/src/main/js/gui/leftPanel/PublicationListDialog.js
+++ b/frontend-js/src/main/js/gui/leftPanel/PublicationListDialog.js
@@ -134,7 +134,7 @@ PublicationListDialog.prototype.show = function () {
autoOpen: false,
resizable: false,
width: Math.max(window.innerWidth / 2, window.innerWidth - 100),
- height: Math.max(window.innerHeight / 2, window.innerHeight - 100),
+ height: Math.max(window.innerHeight / 2, window.innerHeight - 100)
});
}
diff --git a/frontend-js/src/main/js/gui/leftPanel/SubmapPanel.js b/frontend-js/src/main/js/gui/leftPanel/SubmapPanel.js
index fb3bcf711fd9cf85e1c00ec8b181ad1355960607..a2ac63594384c18c00f103efda155667740b21e8 100644
--- a/frontend-js/src/main/js/gui/leftPanel/SubmapPanel.js
+++ b/frontend-js/src/main/js/gui/leftPanel/SubmapPanel.js
@@ -2,6 +2,7 @@
var Promise = require("bluebird");
+var GuiConnector= require('../../GuiConnector');
var Panel = require('../Panel');
var PanelControlElementType = require('../PanelControlElementType');
@@ -50,7 +51,7 @@ SubmapPanel.prototype.createRow = function (model) {
var link = document.createElement("a");
link.href = "#";
link.onclick = function () {
- return self.getMap().openSubmap(model.getId());
+ return self.getMap().openSubmap(model.getId()).catch(GuiConnector.alert);
};
link.appendChild(img);
openTd.appendChild(link);
diff --git a/frontend-js/src/main/js/gui/topMenu/TopMenu.js b/frontend-js/src/main/js/gui/topMenu/TopMenu.js
index a639680d4874b7843b5d3255573feca1babae7be..a38f9a6abf86b758a1f81c8581839dc2c677310c 100644
--- a/frontend-js/src/main/js/gui/topMenu/TopMenu.js
+++ b/frontend-js/src/main/js/gui/topMenu/TopMenu.js
@@ -41,7 +41,7 @@ TopMenu.prototype._createGui = function () {
var hideButton = Functions.createElement({
type: "button",
className: "headerHideButton",
- name: "hideButton",
+ name: "hideButton"
});
hideButtonDiv.appendChild(hideButton);
self.setControlElement(PanelControlElementType.MENU_HIDE_LEFT_PANEL_BUTTON, hideButton);
@@ -49,7 +49,7 @@ TopMenu.prototype._createGui = function () {
var hideButtonIcon = Functions.createElement({
type: "i",
className: "fa fa-chevron-left",
- name: "hideButtonIcon",
+ name: "hideButtonIcon"
});
hideButton.appendChild(hideButtonIcon);
self.setControlElement(PanelControlElementType.MENU_HIDE_LEFT_PANEL_BUTTON_ICON, hideButtonIcon);
@@ -155,7 +155,7 @@ TopMenu.prototype.init = function () {
icon.className = "fa fa-chevron-left";
self.getLeftPanel().show();
}
- google.maps.event.trigger(self.getMap().getGoogleMap(), 'resize');
+ self.getMap().getMapCanvas().triggerListeners('resize');
};
var project = self.getMap().getProject();
@@ -166,9 +166,9 @@ TopMenu.prototype.init = function () {
commentCheckbox.onclick = function () {
ServerConnector.getSessionData(project).setShowComments(commentCheckbox.checked);
if (commentCheckbox.checked) {
- refreshCommentButton.style.display = 'inline';
+ $(refreshCommentButton).css("display","inline");
} else {
- refreshCommentButton.style.display = 'none';
+ $(refreshCommentButton).css("display","none");
}
return self.getMap().refreshComments().then(null, GuiConnector.alert);
};
@@ -195,7 +195,7 @@ TopMenu.prototype.init = function () {
showOverviewButton.onclick = function () {
return self._overviewDialog.showOverview();
};
- showOverviewButton.style.display = "";
+ $(showOverviewButton).css("display","inline-block");
}
if (ServerConnector.getSessionData().getShowComments()) {
diff --git a/frontend-js/src/main/js/logger.js b/frontend-js/src/main/js/logger.js
index 3abbb5be64a12124a12d5ef1fc1a7daa60c9bf39..f60d8a4c25c3355a468a715ea767ab7827f45adb 100644
--- a/frontend-js/src/main/js/logger.js
+++ b/frontend-js/src/main/js/logger.js
@@ -2,5 +2,19 @@
var log4js = require('log4js');
+/**
+ * @typedef {Object} Logger
+ * @property {function(string):void} setLevel
+ * @property {function(Object):void} warn
+ * @property {function(Object):void} info
+ * @property {function(Object):void} debug
+ * @property {function(Object):void} error
+ * @property {function(Object):void} fatal
+ */
+
+/**
+ * @type Logger
+ */
var logger = log4js.getLogger();
+
module.exports = logger;
diff --git a/frontend-js/src/main/js/map/AbstractCustomMap.js b/frontend-js/src/main/js/map/AbstractCustomMap.js
index 2cbf32f4632fd6fd4f26b3c7b09b662b4823f43d..c9d547fbb0ac606478bc8a1df0622b41607776b2 100644
--- a/frontend-js/src/main/js/map/AbstractCustomMap.js
+++ b/frontend-js/src/main/js/map/AbstractCustomMap.js
@@ -3,7 +3,6 @@
var Promise = require("bluebird");
var logger = require('../logger');
-var functions = require('../Functions');
var Alias = require('./data/Alias');
var AliasInfoWindow = require('./window/AliasInfoWindow');
@@ -11,6 +10,8 @@ var AliasSurface = require('./surface/AliasSurface');
var GuiConnector = require('../GuiConnector');
var IdentifiedElement = require('./data/IdentifiedElement');
var ObjectWithListeners = require('../ObjectWithListeners');
+var MapModel = require('./data/MapModel');
+var Point = require('./canvas/Point');
var PointData = require('./data/PointData');
var PointInfoWindow = require('./window/PointInfoWindow');
var Reaction = require('./data/Reaction');
@@ -19,8 +20,17 @@ var ReactionSurface = require('./surface/ReactionSurface');
var MarkerSurfaceCollection = require('./marker/MarkerSurfaceCollection');
+var MapCanvas = require('./canvas/MapCanvas');
+var GoogleMapsApiCanvas = require('./canvas/GoogleMaps/GoogleMapsApiCanvas');
+var OpenLayerCanvas = require('./canvas/OpenLayers/OpenLayerCanvas');
+
/**
* Default constructor.
+ *
+ * @param {MapModel} model
+ * @param {CustomMapOptions} options
+ * @constructor
+ * @extends ObjectWithListeners
*/
function AbstractCustomMap(model, options) {
// call super constructor
@@ -35,49 +45,33 @@ function AbstractCustomMap(model, options) {
this.setElement(options.getElement());
this.setConfiguration(options.getConfiguration());
this.setProject(options.getProject());
+ this.setServerConnector(options.getServerConnector());
this.setModel(model);
// this array contains elements that are presented on a specific overlay (set
// of google map object representing lines/areas that are associated with
// overlay)
+ // @type {Array<AbstractSurface[]>}
this.selectedLayoutOverlays = [];
- // following fields are used in conversion between x,y coordinates and lat,lng
- // coordinates
- this.pixelOrigin_ = new google.maps.Point(this.getTileSize() / 2, this.getTileSize() / 2);
- this.pixelsPerLonDegree_ = this.getTileSize() / 360;
- this.pixelsPerLonRadian_ = this.getTileSize() / (2 * Math.PI);
-
- /* jshint bitwise: false */
- this.zoomFactor = this.getPictureSize() / (this.getTileSize() / (1 << this.getMinZoom()));
-
// array with info windows for Marker pointing to aliases
+ // @type {AliasInfoWindow[]}
this._aliasInfoWindow = [];
// array with info windows for Marker pointing to points
+ // @type {PointInfoWindow[]}
this._pointInfoWindow = [];
// array with info windows for reactions
+ // @type {ReactionInfoWindow[]}
this._reactionInfoWindow = [];
+ // @type {MarkerSurfaceCollection}
this._markerSurfaceCollection = new MarkerSurfaceCollection({map: this});
- // this is google.maps.drawing.DrawingManager that will allow user to draw
- // elements in the client
- this._drawingManager = null;
-
- // this is the polygon that was selected (clicked) last time on the map
- this._selectedArea = null;
-
- // markers should be optimized by default,
- // however, for testing purpose this function could be turned of by javascript
- // the other possibility is that it should be off in the touch mode
- // (bigButtons=true)
- this._markerOptimization = options.isMarkerOptimization();
-
+ // @type {boolean}
this._bigLogo = options.isBigLogo();
- this._customTouchInterface = options.isCustomTouchInterface();
this.setDebug(options.isDebug());
}
@@ -90,258 +84,57 @@ AbstractCustomMap.prototype.constructor = AbstractCustomMap;
AbstractCustomMap.prototype.getMarkerSurfaceCollection = function () {
return this._markerSurfaceCollection;
};
-/**
- * Assigns overlays with images to the google map (which set of images should be
- * used by google maps api for which overlay).
- *
- */
-AbstractCustomMap.prototype.setupLayouts = function () {
- var overlays = this.getProject().getDataOverlays();
- for (var i = 0; i < overlays.length; i++) {
- var overlay = overlays[i];
- var typeOptions = this.createTypeOptions(overlay);
- var mapType = new google.maps.ImageMapType(typeOptions);
- this.getGoogleMap().mapTypes.set(overlay.getId().toString(), mapType);
- }
- this.getGoogleMap().setMapTypeId(overlays[0].getId().toString());
-};
/**
* Creates general google maps options used in this map.
*
+ * @returns {{center: Point, zoom: number, minZoom: number, maxZoom: number, tileSize: number, width: number, height: number, backgroundOverlays: Array}}
*/
AbstractCustomMap.prototype.createMapOptions = function () {
var self = this;
var model = self.getModel();
-
-
- var zoom = ServerConnector.getSessionData(self.getProject()).getZoomLevel(model);
+ var zoom = self.getServerConnector().getSessionData(self.getProject()).getZoomLevel(model);
if (zoom === undefined) {
- zoom = this.getMinZoom();
- }
-
- var centerPoint;
-
- // if we have coordinate data stored in session then restore it
- var point = ServerConnector.getSessionData(self.getProject()).getCenter(model);
- if (point !== undefined) {
- centerPoint = self.fromPointToLatLng(point);
- // if we have default coordinates defined for model
- } else if (model.getDefaultCenterX() !== undefined &&
- model.getDefaultCenterY() !== undefined &&
- model.getDefaultZoomLevel() !== undefined &&
- model.getDefaultCenterX() !== null &&
- model.getDefaultCenterY() !== null &&
- model.getDefaultZoomLevel() !== null) {
-
- centerPoint = self.fromPointToLatLng(new google.maps.Point(model.getDefaultCenterX(), model.getDefaultCenterY()));
zoom = model.getDefaultZoomLevel();
- } else {
- centerPoint = self.fromPointToLatLng(new google.maps.Point(model.getWidth() / 2, model.getHeight() / 2));
+ }
+ if (zoom === undefined || zoom === null) {
+ zoom = self.getMinZoom();
}
- return {
- center: centerPoint,
- rotateControl: true,
- panControl: true,
- mapTypeControl: false,
- zoom: zoom,
- streetViewControl: false,
- fullscreenControl: false,
-
- panControlOptions: {
- position: google.maps.ControlPosition.LEFT_TOP
- },
- zoomControlOptions: {
- style: google.maps.ZoomControlStyle.LARGE,
- position: google.maps.ControlPosition.LEFT_TOP
+ var point = self.getServerConnector().getSessionData(self.getProject()).getCenter(model);
+ if (point === undefined) {
+ var x = model.getDefaultCenterX();
+ var y = model.getDefaultCenterY();
+ if (x !== undefined && y !== undefined && x !== null && y !== null) {
+ point = new Point(x, y);
+ } else {
+ point = new Point(model.getWidth() / 2, model.getHeight() / 2);
}
+ }
- };
-};
+ var overlays = this.getProject().getDataOverlays();
+ var backgroundOverlays = [];
+ for (var i = 0; i < overlays.length; i++) {
+ var overlay = overlays[i];
+ if (!overlay.getInputDataAvailable()) {
+ backgroundOverlays.push({
+ directory: "../map_images/" + self.getProject().getDirectory() + "/" + overlay.getImagesDirectory(self.getId()),
+ id: overlay.getId(),
+ name: overlay.getName()
+ });
+ }
+ }
-/**
- * Create google maps configuration options object for a specific overlay.
- *
- * @param param
- * object with information about overlay
- */
-AbstractCustomMap.prototype.createTypeOptions = function (param) {
- var self = this;
return {
- // this is a function that will retrieve valid url to png images for
- // tiles on different zoom levels
- getTileUrl: function (coord, zoom) {
- // we have 1 tile on self.getConfiguration().MIN_ZOOM and
- // therefore must limit tails according to this
- /* jshint bitwise: false */
- var maxTileRange = 1 << (zoom - self.getMinZoom());
- var maxTileXRange = maxTileRange;
- var maxTileYRange = maxTileRange;
-
- var width = self.getModel().getWidth();
- var height = self.getModel().getHeight();
- if (width > height) {
- maxTileYRange = height / width * maxTileRange;
- } else if (width < height) {
- maxTileXRange = width / height * maxTileRange;
- }
- if (coord.y < 0 || coord.y >= maxTileYRange || coord.x < 0 || coord.x >= maxTileXRange) {
- return null;
- }
- return "../map_images/" + self.getProject().getDirectory() + "/" + param.getImagesDirectory(self.getId()) + "/" + zoom + "/" + coord.x + "/" + coord.y + ".PNG";
- },
- tileSize: new google.maps.Size(self.getTileSize(), self.getTileSize()),
- maxZoom: self.getMaxZoom(),
+ center: point,
+ zoom: zoom,
minZoom: self.getMinZoom(),
- radius: 360,
- name: param.name
- };
-};
-
-/**
- * Sets maximum zoom level on google map.
- *
- */
-AbstractCustomMap.prototype.setMaxZoomLevel = function () {
- this.getGoogleMap().setZoom(this.getMaxZoom());
-};
-
-/**
- * Returns mouse coordinate on the map in lat,lng system.
- *
- */
-AbstractCustomMap.prototype.getMouseLatLng = function () {
- // this method is tricky, the main problem is how to map mouse coordinate to
- // google map
- // to do that we need a point of reference in both systems (x,y and lat,lng)
- // this will be center of the map that is currently visible
- // next, we will have to find distance from this point in x,y coordinates and
- // transform it to lat,lng
-
- var self = this;
- // center point visible on the map
- var latLngCoordinates = self.getGoogleMap().getCenter();
- var point = self.fromLatLngToPoint(latLngCoordinates);
-
- // this is magic :)
- // find offset of the div where google map is located related to top left
- // corner of the browser
- var el = self.getGoogleMap().getDiv();
- for (var lx = 0, ly = 0; el !== null && el !== undefined; lx += el.offsetLeft, ly += el.offsetTop, el = el.offsetParent) {
- }
-
- var offset = {
- x: lx,
- y: ly
- };
-
- var center = {
- x: self.getGoogleMap().getDiv().offsetWidth / 2,
- y: self.getGoogleMap().getDiv().offsetHeight / 2
- };
-
- // and now find how far from center point we are (in pixels)
- var relativeDist = {
- x: (GuiConnector.xPos - offset.x - center.x),
- y: (GuiConnector.yPos - offset.y - center.y)
+ maxZoom: self.getMaxZoom(),
+ tileSize: self.getTileSize(),
+ width: self.getModel().getWidth(),
+ height: self.getModel().getHeight(),
+ backgroundOverlays: backgroundOverlays
};
-
- // transform pixels into x,y distance
- var pointDist = self.fromPixelsToPoint(relativeDist, self.getGoogleMap().getZoom());
-
- // now we have offset in x,y and center point on the map in x,y, so we have
- // final position in x,y
- var newCoordinates = new google.maps.Point(point.x + pointDist.x, point.y + pointDist.y);
-
- // change it to lat,lng
- var latLngResult = self.fromPointToLatLng(newCoordinates);
-
- return latLngResult;
-};
-
-/**
- * Transform distance (coordinates) in pixels into x,y distance on the map.
- *
- * @param pixels
- * x,y distance in pixels
- * @param zoomLevel
- * at which zoom level this pixels where measured
- *
- */
-AbstractCustomMap.prototype.fromPixelsToPoint = function (pixels, zoomLevel) {
- var zoomScale = this.getPictureSize() / (Math.pow(2, zoomLevel - this.getMinZoom()) * this.getTileSize());
- var pointX = pixels.x * zoomScale;
- var pointY = pixels.y * zoomScale;
- return new google.maps.Point(pointX, pointY);
-};
-
-/**
- * Transforms coordinates on the map from google.maps.LatLng to
- * google.maps.Point
- *
- * @param latLng
- * in lat,lng format
- * @param coordinates in x,y format
- *
- */
-AbstractCustomMap.prototype.fromLatLngToPoint = function (latLng) {
- var me = this;
- var point = new google.maps.Point(0, 0);
- var origin = me.pixelOrigin_;
-
- point.x = origin.x + latLng.lng() * me.pixelsPerLonDegree_;
-
- // Truncating to 0.9999 effectively limits latitude to 89.189. This is
- // about a third of a tile past the edge of the world tile.
- var siny = functions.bound(Math.sin(functions.degreesToRadians(latLng.lat())), -0.9999, 0.9999);
- point.y = origin.y + 0.5 * Math.log((1 + siny) / (1 - siny)) * -me.pixelsPerLonRadian_;
-
- // rescale the point (all computations are done assuming that we work on
- // TILE_SIZE square)
- point.x *= me.zoomFactor;
- point.y *= me.zoomFactor;
- return point;
-};
-
-/**
- * Transforms coordinates on the map from google.maps.Point to
- * google.maps.LatLng
- *
- * @param point
- * coordinates in standard x,y format
- * @return coordinates in lat,lng format
- */
-AbstractCustomMap.prototype.fromPointToLatLng = function (point) {
- var me = this;
-
- // rescale the point (all computations are done assuming that we work on
- // TILE_SIZE square)
- var p = new google.maps.Point(point.x / me.zoomFactor, point.y / me.zoomFactor);
- var origin = me.pixelOrigin_;
- var lng = (p.x - origin.x) / me.pixelsPerLonDegree_;
- var latRadians = (p.y - origin.y) / -me.pixelsPerLonRadian_;
- var lat = functions.radiansToDegrees(2 * Math.atan(Math.exp(latRadians)) - Math.PI / 2);
- return new google.maps.LatLng(lat, lng);
-};
-
-/**
- * Transforms google.maps.LatLng to tile coordinate (for instance on which tile
- * mouse clicked).
- *
- *
- * @param latLng
- * coordinates in latlng format
- * @param z
- * zoom level at which we want to find coordinates of tile
- * @return coordinates of a tile
- */
-AbstractCustomMap.prototype.latLngToTile = function (latLng, z) {
- var worldCoordinate = this.fromLatLngToPoint(latLng);
- var pixelCoordinate = new google.maps.Point(worldCoordinate.x * Math.pow(2, z), worldCoordinate.y * Math.pow(2, z));
- var tileCoordinate = new google.maps.Point(Math.floor(pixelCoordinate.x / this.getTileSize()), Math
- .floor(pixelCoordinate.y / this.getTileSize()));
- return tileCoordinate;
};
/**
@@ -356,70 +149,62 @@ AbstractCustomMap.prototype.registerMapClickEvents = function () {
var self = this;
// search event
- google.maps.event.addListener(this.getGoogleMap(), 'click', function (mouseEvent) {
- var point = self.fromLatLngToPoint(mouseEvent.latLng);
+ this.getMapCanvas().addListener('click', function (event) {
var searchDb = customMap.getOverlayByName('search');
if (searchDb !== undefined) {
return searchDb.searchByCoordinates({
modelId: self.getModel().getId(),
- coordinates: point,
- zoom: self.getGoogleMap().getZoom()
- }).then(null, GuiConnector.alert);
+ coordinates: event.arg.point,
+ zoom: self.getZoom()
+ }).catch(GuiConnector.alert);
} else {
logger.warn("Search is impossible because search db is not present");
}
});
// select last clicked map
- google.maps.event.addListener(this.getGoogleMap(), 'click', function (mouseEvent) {
+ this.getMapCanvas().addListener('click', function (event) {
customMap.setActiveSubmapId(self.getId());
- customMap.setActiveSubmapClickCoordinates(self.fromLatLngToPoint(mouseEvent.latLng));
+ customMap.setActiveSubmapClickCoordinates(event.arg.point);
});
// select last clicked map
- google.maps.event.addListener(this.getGoogleMap(), 'rightclick', function (mouseEvent) {
+ this.getMapCanvas().addListener('rightclick', function (event) {
customMap.setActiveSubmapId(self.getId());
- var coordinates = self.fromLatLngToPoint(mouseEvent.latLng);
- customMap.setActiveSubmapClickCoordinates(coordinates);
- return activateMolStarLink(coordinates, self);
+ customMap.setActiveSubmapClickCoordinates(event.arg.point);
+ return activateMolStarLink(event.arg.point, self);
});
// prepare for image export
- google.maps.event.addListener(this.getGoogleMap(), 'rightclick', function () {
- var bounds = self.getGoogleMap().getBounds();
- var polygon = "";
+ this.getMapCanvas().addListener('rightclick', function () {
+ var bounds = self.getBounds();
- var ne = bounds.getNorthEast();
- var sw = bounds.getSouthWest();
+ var topLeft = bounds.getTopLeft();
+ var rightBottom = bounds.getRightBottom();
- var westLng = sw.lng();
- var eastLng = ne.lng();
+ var x1 = Math.max(0, topLeft.x);
+ var y1 = Math.max(0, topLeft.y);
- if (westLng > 0) {
- westLng = -180;
- }
- if (eastLng - westLng > 90) {
- eastLng = -90;
- } else if (eastLng > -90) {
- eastLng = -90;
- }
+ var x2 = Math.min(self.getModel().getWidth(), rightBottom.x);
+ var y2 = Math.max(self.getModel().getHeight(), rightBottom.y);
- polygon += ne.lat() + "," + westLng + ";";
- polygon += ne.lat() + "," + eastLng + ";";
- polygon += sw.lat() + "," + eastLng + ";";
- polygon += sw.lat() + "," + westLng + ";";
+ var polygon = "";
+ polygon += x1 + "," + y1 + ";";
+ polygon += x2 + "," + y2 + ";";
+ polygon += x2 + "," + y2 + ";";
+ polygon += x1 + "," + y2 + ";";
self.getTopMap().setSelectedPolygon(polygon);
});
// context menu event
- google.maps.event.addListener(this.getGoogleMap(), 'rightclick', function (mouseEvent) {
+ this.getMapCanvas().addListener('rightclick', function () {
return self.getTopMap().getContextMenu().open(GuiConnector.xPos, GuiConnector.yPos, new Date().getTime());
});
//long click should open context menu https://stackoverflow.com/a/38457006/1127920
var mousedUp = false;
- $(self.getElement()).on("touchstart", function (event) {
+ $(self.getElement()).on("touchstart", function () {
mousedUp = false;
setTimeout(function () {
if (mousedUp === false) {
@@ -427,28 +212,44 @@ AbstractCustomMap.prototype.registerMapClickEvents = function () {
}
}, 500);
});
- google.maps.event.addListener(this.getGoogleMap(), 'mouseup', function () {
+ // noinspection SpellCheckingInspection
+ this.getMapCanvas().addListener('mouseup', function () {
mousedUp = true;
});
- google.maps.event.addListener(this.getGoogleMap(), 'dragstart', function () {
+ // noinspection SpellCheckingInspection
+ this.getMapCanvas().addListener('dragstart', function () {
mousedUp = true;
});
+
+ //for drawing shapes on the map
+ this.getMapCanvas().addListener('shape-rightclick', function (event) {
+ customMap.setActiveSubmapId(self.getId());
+ // noinspection JSCheckFunctionSignatures
+ self.getTopMap().setSelectedPolygon(event.arg.polygon);
+ self.getTopMap().getSelectionContextMenu().open(GuiConnector.xPos, GuiConnector.yPos, new Date().getTime());
+ });
};
+/**
+ *
+ * @param {Point} coordinates
+ * @param {AbstractCustomMap} map
+ * @returns {Promise}
+ */
function activateMolStarLink(coordinates, map) {
- return ServerConnector.getClosestElementsByCoordinates({
+ return map.getServerConnector().getClosestElementsByCoordinates({
modelId: map.getId(),
coordinates: coordinates,
count: 1
}).then(function (identifiedElements) {
- return map.getDistance({
+ return map.getTopMap().getDistance({
modelId: map.getId(),
coordinates: coordinates,
element: identifiedElements[0]
}).then(function (distance) {
- if (distance == 0) return identifiedElements;
+ if (distance === 0) return identifiedElements;
else return Promise.reject(new Error());
})
@@ -463,155 +264,29 @@ function activateMolStarLink(coordinates, map) {
uniprotIds.push(ref.getResource());
}
}
- if (uniprotIds.length > 0) map.getContextMenu().getMolStar().activateInContextMenu(uniprotIds);
- else map.getContextMenu().getMolStar().deactivateInContextMenu();
+ if (uniprotIds.length > 0) map.getTopMap().getContextMenu().getMolStar().activateInContextMenu(uniprotIds);
+ else map.getTopMap().getContextMenu().getMolStar().deactivateInContextMenu();
}).catch(function () {
return map.getTopMap().getContextMenu().getMolStar().deactivateInContextMenu();
});
}
/**
- * It toggle drawing manager used on the map: if it's on then it will turn it
- * off, if it's off it will turn it on
- *
- */
-AbstractCustomMap.prototype._turnOnOffDrawing = function () {
- if (this.isDrawingOn()) {
- this.turnOffDrawing();
- } else {
- this.turnOnDrawing();
- }
-};
-
-/**
- * Checks if the drawing manager for the map is on.
*
+ * @returns {boolean}
*/
AbstractCustomMap.prototype.isDrawingOn = function () {
- return this._drawingManager !== null;
-};
-
-/**
- * Turns on drawing manager on the map.
- */
-AbstractCustomMap.prototype.turnOnDrawing = function () {
- if (this.isDrawingOn()) {
- logger.warn("Trying to turn on drawing manager, but it is already available.");
- return;
- }
- var customMap = this.getTopMap();
- var self = this;
- this._drawingManager = new google.maps.drawing.DrawingManager({
- drawingMode: google.maps.drawing.OverlayType.MARKER,
- drawingControl: true,
- drawingControlOptions: {
- position: google.maps.ControlPosition.TOP_CENTER,
- drawingModes: [google.maps.drawing.OverlayType.POLYGON]
- },
- markerOptions: {
- icon: 'images/beachflag.png'
- },
- circleOptions: {
- fillColor: '#ffff00',
- fillOpacity: 1,
- strokeWeight: 5,
- clickable: false,
- editable: true,
- zIndex: 1
- }
- });
- this._drawingManager.setMap(this.getGoogleMap());
- this._drawingManager.setDrawingMode(google.maps.drawing.OverlayType.POLYGON);
-
- google.maps.event.addListener(this._drawingManager, 'overlaycomplete', function (e) {
- if (e.type !== google.maps.drawing.OverlayType.MARKER) {
- // Switch back to non-drawing mode after drawing a shape.
- self._drawingManager.setDrawingMode(null);
-
- // Add an event listener that selects the newly-drawn shape when the
- // user mouses down on it.
- var newShape = e.overlay;
- newShape.type = e.type;
- google.maps.event.addListener(newShape, 'rightclick', function (e) {
- // select map that was clicked
- customMap.setActiveSubmapId(self.getId());
-
- self.setSelectedArea(newShape);
- newShape.position = e.latLng;
-
- self.getTopMap().setSelectedPolygon(self.areaToString(newShape));
-
- self.getTopMap().getSelectionContextMenu().open(GuiConnector.xPos, GuiConnector.yPos, new Date().getTime());
- });
- }
- });
-
+ return this.getMapCanvas().isDrawingOn();
};
-/**
- * Sets selectedArea on this map.
- *
- */
-AbstractCustomMap.prototype.setSelectedArea = function (area) {
- this._selectedArea = area;
-};
/**
- * Returns selectedArea on this map.
- *
- */
-AbstractCustomMap.prototype.getSelectedArea = function () {
- return this._selectedArea;
-};
-
-/**
- * Transforms google.maps.Polygon into string with coordinates.
- *
- */
-AbstractCustomMap.prototype.areaToString = function (area) {
- var len = area.getPath().length;
- var path = area.getPath();
- var res = "";
- for (var i = 0; i < len; i++) {
- var latLng = path.getAt(i);
- res += latLng.lat() + "," + latLng.lng() + ";";
- }
- return res;
-};
-
-/**
- * Removes selected area (polygon) from the map.
- */
-AbstractCustomMap.prototype._removeSelection = function () {
- if (this._selectedArea) {
- this._selectedArea.setMap(null);
- this._selectedArea = null;
- } else {
- logger.warn("Cannot remove selected area. No area was selected");
- }
-};
-
-/**
- * Turns off drawing manager on the map.
- */
-AbstractCustomMap.prototype.turnOffDrawing = function () {
- if (this.isDrawingOn()) {
- this._drawingManager.setMap(null);
- this._drawingManager = null;
- } else {
- logger.warn("Trying to turn off drawing manager, but it is not available.");
- }
-};
-
-/**
- * Returns top map. TODO implementation of this function should be probably
- * moved to Submap and CustomMap classes and here only abstract function
- * definition
+ * Returns top map.
*
* @returns {CustomMap}
*/
AbstractCustomMap.prototype.getTopMap = function () {
- logger.fatal("Not implemented");
+ throw new Error("Not implemented");
};
/**
@@ -621,34 +296,34 @@ AbstractCustomMap.prototype.getTopMap = function () {
* overlay is placed in the list (starting from 0) and length contains
* information how many overlays we visualize in total.
*
- * @param overlayId
+ * @param {number} overlayId
* identifier of a overlay
- * @param index
+ * @param {number} index
* when visualizing more than one overlay at the same time index
* contains information at which position in the list this overlay is
* placed
- * @param length
+ * @param {number} length
* number of overlays that are currently visualized
+ *
+ * @returns {PromiseLike}
*/
AbstractCustomMap.prototype._resizeSelectedDataOverlay = function (overlayId, index, length) {
var self = this;
- return new Promise(function (resolve) {
- // if map is not initialized then don't perform this operation
- if (!self.initialized) {
- logger.debug("Model " + self.getId() + " not initialized");
- resolve();
- }
- logger.debug("Resize overlay: " + overlayId);
- // start ratio
- var startX = index * (1.0 / length);
- // end ratio
- var endX = (index + 1) * (1.0 / length);
-
- for (var i = 0; i < self.selectedLayoutOverlays[overlayId].length; i++) {
- self.selectedLayoutOverlays[overlayId][i].setBoundsForAlias(startX, endX);
- }
- resolve();
- });
+ // if map is not initialized then don't perform this operation
+ if (!self.isInitialized()) {
+ logger.debug("Model " + self.getId() + " not initialized");
+ return Promise.resolve();
+ }
+ logger.debug("Resize overlay: " + overlayId);
+ // start ratio
+ var startX = index * (1.0 / length);
+ // end ratio
+ var endX = (index + 1) * (1.0 / length);
+
+ for (var i = 0; i < self.selectedLayoutOverlays[overlayId].length; i++) {
+ self.selectedLayoutOverlays[overlayId][i].setBoundsForAlias(startX, endX);
+ }
+ return Promise.resolve();
};
/**
@@ -657,145 +332,140 @@ AbstractCustomMap.prototype._resizeSelectedDataOverlay = function (overlayId, in
* in the list (starting from 0) and length contains information how many
* overlays we visualize in total.
*
- * @param overlayId
+ * @param {number} overlayId
* identifier of a overlay
- * @param index
+ * @param {number} index
* when visualizing more than one overlay at the same time index
* contains information at which position in the list this overlay is
* placed
- * @param length
+ * @param {number} length
* number of overlays that are currently visualized
+ * @returns {PromiseLike}
*/
AbstractCustomMap.prototype._showSelectedDataOverlay = function (overlayId, index, length) {
var self = this;
// if map is not initialized then don't perform this operation
- return new Promise(function (resolve, reject) {
- if (!self.initialized) {
- logger.debug("Model " + self.getId() + " not initialized");
- resolve();
- return;
- } else {
- logger.debug("Showing model " + self.getId());
- }
+ if (!self.isInitialized()) {
+ logger.debug("Model " + self.getId() + " not initialized");
+ return Promise.resolve();
+ } else {
+ logger.debug("Showing model " + self.getId());
+ }
- self.selectedLayoutOverlays[overlayId] = [];
+ self.selectedLayoutOverlays[overlayId] = [];
- // start ratio
- var startX = index * (1.0 / length);
- // end ratio
- var endX = (index + 1) * (1.0 / length);
+ // start ratio
+ var startX = index * (1.0 / length);
+ // end ratio
+ var endX = (index + 1) * (1.0 / length);
- var overlayAliases;
- var overlayReactions;
+ var overlayAliases;
+ var overlayReactions;
- return self.getProject().getDataOverlayById(overlayId).then(function (overlay) {
- overlayAliases = overlay.getAliases();
- overlayReactions = overlay.getReactions();
+ return self.getProject().getDataOverlayById(overlayId).then(function (overlay) {
+ overlayAliases = overlay.getAliases();
+ overlayReactions = overlay.getReactions();
- var identifiedElements = [];
- var i;
- for (i = 0; i < overlayAliases.length; i++) {
- if (overlayAliases[i].getModelId() === self.getId()) {
- identifiedElements.push(new IdentifiedElement(overlayAliases[i]));
- }
+ var i, identifiedElements = [];
+ for (i = 0; i < overlayAliases.length; i++) {
+ if (overlayAliases[i].getModelId() === self.getId()) {
+ identifiedElements.push(new IdentifiedElement(overlayAliases[i]));
}
- var reactionIds = [];
- for (i = 0; i < overlayReactions.length; i++) {
- if (overlayReactions[i].getModelId() === self.getId()) {
- identifiedElements.push(new IdentifiedElement(overlayReactions[i]));
- }
+ }
+ for (i = 0; i < overlayReactions.length; i++) {
+ if (overlayReactions[i].getModelId() === self.getId()) {
+ identifiedElements.push(new IdentifiedElement(overlayReactions[i]));
}
- return self.getModel().getByIdentifiedElements(identifiedElements, false);
- }).then(function () {
- return Promise.each(overlayAliases, function (overlayAlias) {
- if (overlayAlias.getModelId() === self.getId()) {
- var surface;
- var element;
- return self.getModel().getAliasById(overlayAlias.getId()).then(function (aliasData) {
- element = new IdentifiedElement(aliasData);
- return AliasSurface.create({
- overlayAlias: overlayAlias,
- alias: aliasData,
- map: self,
- startX: startX,
- endX: endX,
- onClick: [function () {
- return self.getTopMap().getOverlayByName("search").searchByTarget(element);
- }, function () {
- return self.getTopMap().callListeners("onBioEntityClick", element);
- }]
- });
- }).then(function (result) {
- surface = result;
- self.selectedLayoutOverlays[overlayId].push(surface);
+ }
+ return self.getModel().getByIdentifiedElements(identifiedElements, false);
+ }).then(function () {
+ return Promise.each(overlayAliases, function (overlayAlias) {
+ if (overlayAlias.getModelId() === self.getId()) {
+ return self.getModel().getAliasById(overlayAlias.getId()).then(function (aliasData) {
+ var surface = new AliasSurface({
+ overlayAlias: overlayAlias,
+ alias: aliasData,
+ map: self,
+ startX: startX,
+ endX: endX,
+ onClick: [function () {
+ return self.getTopMap().getOverlayByName("search").searchByTarget(new IdentifiedElement(aliasData));
+ }, function () {
+ return self.getTopMap().callListeners("onBioEntityClick", new IdentifiedElement(aliasData));
+ }]
});
- }
- });
- }).then(function () {
- return Promise.each(overlayReactions, function (overlayReaction) {
- if (overlayReaction.getModelId() === self.getId()) {
- return self.getModel().getReactionById(overlayReaction.getId()).then(function (reactionData) {
- var surface;
- var element = new IdentifiedElement(reactionData);
- return ReactionSurface.create({
- layoutReaction: overlayReaction,
- reaction: reactionData,
- map: self,
- onClick: [function () {
- return self.getTopMap().getOverlayByName("search").searchByTarget(element);
- }, function () {
- return self.getTopMap().callListeners("onBioEntityClick", element);
- }],
- customized: (length === 1)
- }).then(function (result) {
- surface = result;
- self.selectedLayoutOverlays[overlayId].push(surface);
- surface.show();
- });
+ self.selectedLayoutOverlays[overlayId].push(surface);
+ return surface.show();
+ });
+ }
+ });
+ }).then(function () {
+ return Promise.each(overlayReactions, function (overlayReaction) {
+ if (overlayReaction.getModelId() === self.getId()) {
+ return self.getModel().getReactionById(overlayReaction.getId()).then(function (reactionData) {
+ var surface = new ReactionSurface({
+ layoutReaction: overlayReaction,
+ reaction: reactionData,
+ map: self,
+ onClick: [function () {
+ return self.getTopMap().getOverlayByName("search").searchByTarget(new IdentifiedElement(reactionData));
+ }, function () {
+ return self.getTopMap().callListeners("onBioEntityClick", new IdentifiedElement(reactionData));
+ }],
+ customized: (length === 1)
});
- }
- });
- }).then(function () {
- resolve();
- }).then(null, reject);
+ self.selectedLayoutOverlays[overlayId].push(surface);
+ return surface.show();
+ });
+ }
+ });
});
};
/**
* Hides all elements from overlay.
*
- * @param overlayId
+ * @param {number} overlayId
* identifier of a overlay
+ *
+ * @returns {Promise}
*/
AbstractCustomMap.prototype._hideSelectedLayout = function (overlayId) {
// if map is not initialized then don't perform this operation
- if (!this.initialized) {
+ if (!this.isInitialized()) {
logger.debug("Model " + this.getId() + " not initialized");
- return;
+ return Promise.resolve();
}
+
+ var promises =[];
for (var i = 0; i < this.selectedLayoutOverlays[overlayId].length; i++) {
- this.selectedLayoutOverlays[overlayId][i].setMap(null);
+ promises.push(this.selectedLayoutOverlays[overlayId][i].hide());
}
this.selectedLayoutOverlays[overlayId] = [];
+ return Promise.all(promises);
};
/**
* Opens {@link AbstractInfoWindow} for a marker.
*
- * @param marker
+ * @param {Marker} [marker]
* marker for which we are opening window
+ * @param {IdentifiedElement} element
+ * marker for which we are opening window
+ *
+ * @returns {PromiseLike}
*/
-AbstractCustomMap.prototype._openInfoWindowForIdentifiedElement = function (element, googleMarker) {
+AbstractCustomMap.prototype._openInfoWindowForIdentifiedElement = function (element, marker) {
var self = this;
if (element.getType() === "ALIAS") {
return self.getModel().getByIdentifiedElement(element).then(function (alias) {
- return self._openInfoWindowForAlias(alias, googleMarker);
+ return self._openInfoWindowForAlias(alias, marker);
});
} else if (element.getType() === "POINT") {
- return self._openInfoWindowForPoint(new PointData(element), googleMarker);
+ return self._openInfoWindowForPoint(new PointData(element), marker);
} else if (element.getType() === "REACTION") {
return self.getModel().getByIdentifiedElement(element, true).then(function (reaction) {
- return self._openInfoWindowForReaction(reaction, googleMarker);
+ return self._openInfoWindowForReaction(reaction, marker);
});
} else {
throw new Error("Unknown element type: " + element.getType());
@@ -806,27 +476,32 @@ AbstractCustomMap.prototype._openInfoWindowForIdentifiedElement = function (elem
/**
* Opens {@link AliasInfoWindow} for given alias.
*
- * @param aliasId
- * identifier of the alias
+ * @param {Alias} alias
+ * @param {Marker} marker
+ *
+ * @returns {PromiseLike}
*/
-AbstractCustomMap.prototype._openInfoWindowForAlias = function (alias, googleMarker) {
+AbstractCustomMap.prototype._openInfoWindowForAlias = function (alias, marker) {
var self = this;
var infoWindow = this.getAliasInfoWindowById(alias.getId());
if (infoWindow !== null && infoWindow !== undefined) {
if (!infoWindow.isOpened()) {
- infoWindow.open(googleMarker);
+ infoWindow.open(marker);
} else {
logger.warn("Info window for alias: " + alias.getId() + " is already opened");
}
return Promise.resolve(infoWindow);
} else {
- self._aliasInfoWindow[alias.getId()] = new AliasInfoWindow({
+ infoWindow = new AliasInfoWindow({
alias: alias,
map: self,
- marker: googleMarker,
+ marker: marker
+ });
+ self._aliasInfoWindow[alias.getId()] = infoWindow;
+ return infoWindow.init().then(function () {
+ return infoWindow.open();
});
- return self._aliasInfoWindow[alias.getId()].init();
}
};
@@ -834,9 +509,9 @@ AbstractCustomMap.prototype._openInfoWindowForAlias = function (alias, googleMar
* Returns promise of a list of {@link LayoutAlias} information for a given
* {@link Alias} in all currently visualized overlays.
*
- * @param aliasId
+ * @param {number} aliasId
* identifier of the {@link Alias}
- * @returns promise of an {Array} with list of {@link LayoutAlias} information
+ * @returns {PromiseLike<LayoutAlias[]>| Promise<LayoutAlias[]>} promise of an {Array} with list of {@link LayoutAlias} information
* for a given {@link Alias} in all currently visualized overlays
*/
AbstractCustomMap.prototype.getAliasVisibleLayoutsData = function (aliasId) {
@@ -851,41 +526,21 @@ AbstractCustomMap.prototype.getAliasVisibleLayoutsData = function (aliasId) {
});
};
-/**
- * Refresh content of all {@link AliasInfoWindow} in this map.
- */
-AbstractCustomMap.prototype._refreshInfoWindows = function () {
- var promises = [];
- for (var key in this._pointInfoWindow) {
- if (this._pointInfoWindow.hasOwnProperty(key)) {
- if (this._pointInfoWindow[key].isOpened()) {
- promises.push(this._pointInfoWindow[key].update());
- }
- }
- }
- for (var aliasKey in this._aliasInfoWindow) {
- if (this._aliasInfoWindow.hasOwnProperty(aliasKey)) {
- if (this._aliasInfoWindow[aliasKey].isOpened()) {
- promises.push(this._aliasInfoWindow[aliasKey].update());
- }
- }
- }
- return Promise.all(promises);
-};
-
-
/**
* Opens {@link ReactionInfoWindow} for given reaction identifier.
*
- * @param reactionId
- * reaction identifier
+ * @param {Reaction} reaction
+ * @param {Marker} [marker]
+ *
+ * @returns {Promise<any>|PromiseLike<any>}
+ * @protected
*/
-AbstractCustomMap.prototype._openInfoWindowForReaction = function (reaction, googleMarker) {
+AbstractCustomMap.prototype._openInfoWindowForReaction = function (reaction, marker) {
var infoWindow = this.getReactionInfoWindowById(reaction.getId());
var self = this;
if (infoWindow !== null && infoWindow !== undefined) {
if (!infoWindow.isOpened()) {
- infoWindow.open(googleMarker);
+ infoWindow.open(marker);
} else {
logger.warn("Info window for reaction: " + reaction.getId() + " is already opened");
}
@@ -895,25 +550,32 @@ AbstractCustomMap.prototype._openInfoWindowForReaction = function (reaction, goo
infoWindow = new ReactionInfoWindow({
reaction: reaction,
map: self,
- marker: googleMarker
+ marker: marker
});
self._reactionInfoWindow[reaction.getId()] = infoWindow;
return infoWindow.init();
}).then(function () {
return infoWindow.open();
}).then(function () {
- return infoWindow;
+ return Promise.resolve(infoWindow);
});
}
};
-AbstractCustomMap.prototype._openInfoWindowForPoint = function (pointData, googleMarker) {
+/**
+ *
+ * @param {PointData} pointData
+ * @param {Marker} marker
+ * @returns {PromiseLike}
+ * @private
+ */
+AbstractCustomMap.prototype._openInfoWindowForPoint = function (pointData, marker) {
var self = this;
var infoWindow = this.getPointInfoWindowById(pointData.getId());
if (infoWindow !== null && infoWindow !== undefined) {
if (!infoWindow.isOpened()) {
- infoWindow.open(googleMarker);
+ infoWindow.open(marker);
} else {
logger.warn("Info window for point: " + pointData.getId() + " is already opened");
}
@@ -921,18 +583,24 @@ AbstractCustomMap.prototype._openInfoWindowForPoint = function (pointData, googl
infoWindow = new PointInfoWindow({
point: pointData,
map: self,
- marker: googleMarker,
+ marker: marker
});
this._pointInfoWindow[pointData.getId()] = infoWindow;
+ return infoWindow.init().then(function () {
+ return infoWindow.open();
+ }).then(function () {
+ return infoWindow;
+ })
}
return Promise.resolve(infoWindow);
};
/**
- * Opens {@link AbstractInfoWindow} for a marker.
+ * Opens {@link AbstractInfoWindow} for element.
*
- * @param marker
- * marker for which we are opening window
+ * @param {IdentifiedElement} element
+ *
+ * @returns {AbstractInfoWindow}
*/
AbstractCustomMap.prototype.returnInfoWindowForIdentifiedElement = function (element) {
var markerId = element.getId();
@@ -943,81 +611,64 @@ AbstractCustomMap.prototype.returnInfoWindowForIdentifiedElement = function (ele
} else if (element.getType() === "REACTION") {
return this.getReactionInfoWindowById(markerId);
} else {
- throw new Error("Unknown marker type: ", element);
+ throw new Error("Unknown marker type: " + element.getType());
}
};
/**
* Returns identifier.
*
- * @returns identifier
+ * @returns {number} identifier
*/
AbstractCustomMap.prototype.getId = function () {
return this.getModel().getId();
};
+/**
+ *
+ * @returns {Configuration}
+ */
AbstractCustomMap.prototype.getConfiguration = function () {
return this._configuration;
};
+/**
+ *
+ * @param {Configuration} configuration
+ */
AbstractCustomMap.prototype.setConfiguration = function (configuration) {
this._configuration = configuration;
};
AbstractCustomMap.prototype._createMapChangedCallbacks = function () {
var self = this;
- var sessionData = ServerConnector.getSessionData(self.getTopMap().getProject());
+ var sessionData = self.getServerConnector().getSessionData(self.getTopMap().getProject());
// listener for changing zoom level
- google.maps.event.addListener(this.getGoogleMap(), 'zoom_changed', function () {
- sessionData.setZoomLevel(self.getModel(), self.getGoogleMap().getZoom());
+ this.getMapCanvas().addListener('zoom_changed', function () {
+ sessionData.setZoomLevel(self.getModel(), self.getZoom());
});
- google.maps.event.addListener(this.getGoogleMap(), 'zoom_changed', function () {
- return self.callListeners("onZoomChanged", self.getGoogleMap().getZoom());
+ this.getMapCanvas().addListener('zoom_changed', function () {
+ return self.callListeners("onZoomChanged", self.getZoom());
});
// listener for changing location of the map (moving left/right/top/bottom
- google.maps.event.addListener(this.getGoogleMap(), 'center_changed', function () {
- var coord = self.getGoogleMap().getCenter();
- var point = self.fromLatLngToPoint(coord);
+ this.getMapCanvas().addListener('center_changed', function () {
+ var point = self.getMapCanvas().getCenter();
sessionData.setCenter(self.getModel(), point);
});
- google.maps.event.addListener(this.getGoogleMap(), 'center_changed', function () {
+ this.getMapCanvas().addListener('center_changed', function () {
return self.callListeners("onCenterChanged", self.getCenter());
});
};
-AbstractCustomMap.prototype.addCenterButton = function () {
- var self = this;
- var centerDiv = functions.createElement({
- type: "div",
- style: "padding:5px"
- });
- var centerButton = functions.createElement({
- type: "a",
- content: "<i class='fa fa-crosshairs' style='font-size:24px;color:grey'></i> ",
- title: "center map",
- href: "#",
- onclick: function () {
- var bounds = new google.maps.LatLngBounds();
- bounds.extend(self.getTopLeftLatLng());
- bounds.extend(self.getBottomRightLatLng());
-
- return self.getGoogleMap().fitBounds(bounds);
- },
- xss: false
- });
- centerDiv.appendChild(centerButton);
- self.getGoogleMap().controls[google.maps.ControlPosition.RIGHT_TOP].push(centerDiv);
-
-};
/**
* Returns {@link ReactionInfoWindow} for given reaction identifier
*
- * @param reactionId
+ * @param {number} reactionId
* reaction identifier
- * @returns {@link ReactionInfoWindow} for given reaction identifier
+ * @returns {ReactionInfoWindow} for given reaction identifier
*/
AbstractCustomMap.prototype.getReactionInfoWindowById = function (reactionId) {
return this._reactionInfoWindow[reactionId];
@@ -1026,9 +677,9 @@ AbstractCustomMap.prototype.getReactionInfoWindowById = function (reactionId) {
/**
* Returns {@link AliasInfoWindow} for given alias identifier
*
- * @param aliasId
+ * @param {number} aliasId
* alias identifier
- * @returns {@link AliasInfoWindow} for given alias identifier
+ * @returns {AliasInfoWindow} for given alias identifier
*/
AbstractCustomMap.prototype.getAliasInfoWindowById = function (aliasId) {
return this._aliasInfoWindow[aliasId];
@@ -1037,38 +688,54 @@ AbstractCustomMap.prototype.getAliasInfoWindowById = function (aliasId) {
/**
* Returns {@link PointInfoWindow} for given point identifier
*
- * @param pointId
+ * @param {string} pointId
* point identifier
- * @returns {@link PointInfoWindow} for given point identifier
+ * @returns {PointInfoWindow} for given point identifier
*/
AbstractCustomMap.prototype.getPointInfoWindowById = function (pointId) {
return this._pointInfoWindow[pointId];
};
+/**
+ *
+ * @returns {MapModel}
+ */
AbstractCustomMap.prototype.getModel = function () {
return this._model;
};
+/**
+ * MapModel}
+ * @param model
+ */
AbstractCustomMap.prototype.setModel = function (model) {
this._model = model;
};
+/**
+ *
+ * @returns {number}
+ */
AbstractCustomMap.prototype.getTileSize = function () {
return this.getModel().getTileSize();
};
+/**
+ *
+ * @returns {number}
+ */
AbstractCustomMap.prototype.getMinZoom = function () {
return this.getModel().getMinZoom();
};
+/**
+ *
+ * @returns {number}
+ */
AbstractCustomMap.prototype.getMaxZoom = function () {
return this.getModel().getMaxZoom();
};
-AbstractCustomMap.prototype.getPictureSize = function () {
- return this.getModel().getPictureSize();
-};
-
/**
* Returns array containing elements that are presented on a specific overlay
* (set of google map objects representing lines/areas that are associated with
@@ -1083,34 +750,36 @@ AbstractCustomMap.prototype.getSelectedLayoutOverlays = function () {
};
/**
- * Returns google.maps.map object used to representing data.
*
- * @returns google.maps.map object used to representing data
+ * @returns {GoogleMapsApiCanvas|OpenLayerCanvas}
*/
-AbstractCustomMap.prototype.getGoogleMap = function () {
- return this._map;
+AbstractCustomMap.prototype.getMapCanvas = function () {
+ return this._canvas;
};
/**
- * Sets google.maps.map object used to representing data.
*
+ * @param {GoogleMapsApiCanvas|OpenLayerCanvas} canvas
*/
-AbstractCustomMap.prototype.setGoogleMap = function (googleMap) {
- this._map = googleMap;
-};
-
-AbstractCustomMap.prototype.isMarkerOptimization = function () {
- return this._markerOptimization;
+AbstractCustomMap.prototype.setMapCanvas = function (canvas) {
+ if (!(canvas instanceof MapCanvas)) {
+ throw new Error("canvas must implement MapCanvas class");
+ }
+ this._canvas = canvas;
};
+/**
+ *
+ * @returns {boolean}
+ */
AbstractCustomMap.prototype.isBigLogo = function () {
return this._bigLogo;
};
-AbstractCustomMap.prototype.isCustomTouchInterface = function () {
- return this._customTouchInterface;
-};
-
+/**
+ *
+ * @param {boolean} debug
+ */
AbstractCustomMap.prototype.setDebug = function (debug) {
if (debug !== undefined) {
if (typeof debug !== "boolean") {
@@ -1120,21 +789,42 @@ AbstractCustomMap.prototype.setDebug = function (debug) {
}
};
+/**
+ *
+ * @returns {boolean}
+ */
AbstractCustomMap.prototype.isDebug = function () {
return this._debug === true;
};
-AbstractCustomMap.prototype.getTopLeftLatLng = function () {
- return this.fromPointToLatLng(new google.maps.Point(0, 0))
+/**
+ *
+ * @returns {Point}
+ */
+AbstractCustomMap.prototype.getTopLeft = function () {
+ return new Point(0, 0)
};
-AbstractCustomMap.prototype.getBottomRightLatLng = function () {
- return this.fromPointToLatLng(new google.maps.Point(this.getModel().getWidth(), this.getModel().getHeight()));
+/**
+ *
+ * @returns {Point}
+ */
+AbstractCustomMap.prototype.getBottomRight = function () {
+ return new Point(this.getModel().getWidth(), this.getModel().getHeight());
};
+/**
+ *
+ * @returns {HTMLElement}
+ */
AbstractCustomMap.prototype.getElement = function () {
return this._element;
};
+
+/**
+ *
+ * @param {HTMLElement} element
+ */
AbstractCustomMap.prototype.setElement = function (element) {
this._element = element;
};
@@ -1142,138 +832,206 @@ AbstractCustomMap.prototype.setElement = function (element) {
/**
* Sets center point for google maps.
*
- * @param coordinates
+ * @param {Point} coordinates
* new center point on map
+ * @returns {PromiseLike}
*/
AbstractCustomMap.prototype.setCenter = function (coordinates) {
- if (coordinates instanceof google.maps.Point) {
- coordinates = this.fromPointToLatLng(coordinates);
+ if (!(coordinates instanceof Point)) {
+ throw new Error("expected Point structure");
}
- if (this.initialized) {
- return Promise.resolve(this.getGoogleMap().setCenter(coordinates));
+ if (this.isInitialized()) {
+ return Promise.resolve(this.getMapCanvas().setCenter(coordinates));
} else {
logger.warn("cannot center map that is not opened yet");
return Promise.resolve();
}
};
+/**
+ * @returns {Point}
+ */
AbstractCustomMap.prototype.getCenter = function () {
- var coordinates = this.getGoogleMap().getCenter();
- return this.fromLatLngToPoint(coordinates);
+ return this.getMapCanvas().getCenter();
};
+/**
+ * @returns {Bounds}
+ */
AbstractCustomMap.prototype.getBounds = function () {
- var self = this;
- var bounds = self.getGoogleMap().getBounds();
- var ne = bounds.getNorthEast();
- var sw = bounds.getSouthWest();
-
- var result = {
- p1: this.fromLatLngToPoint(ne),
- p2: this.fromLatLngToPoint(sw)
- };
- if (result.p2.x > result.p1.x) {
- result.p2.x -= 360 * self.pixelsPerLonDegree_ * self.zoomFactor;
- }
- return result;
+ return this.getMapCanvas().getBounds();
};
/**
* Sets zoom level for google maps.
*
- * @param zoom
+ * @param {number} zoom
* new zoom level on map
*/
AbstractCustomMap.prototype.setZoom = function (zoom) {
var self = this;
- if (self.initialized) {
- return Promise.resolve(self.getGoogleMap().setZoom(zoom));
+ if (self.isInitialized()) {
+ return Promise.resolve(self.getMapCanvas().setZoom(zoom));
} else {
logger.warn("cannot change zoom for map that is not opened yet");
return Promise.resolve();
}
};
+/**
+ *
+ * @returns {number}
+ */
AbstractCustomMap.prototype.getZoom = function () {
- return this.getGoogleMap().getZoom()
+ return this.getMapCanvas().getZoom()
};
-AbstractCustomMap.prototype.fitBounds = function (markers) {
+/**
+ *
+ * @param {BioEntity[]} bioEntities
+ *
+ * @returns {PromiseLike}
+ */
+AbstractCustomMap.prototype.fitBounds = function (bioEntities) {
var self = this;
- var map = self.getGoogleMap();
- if (map !== undefined && markers.length > 0) {
- var minX = self.getModel().getWidth();
- var minY = self.getModel().getHeight();
- var maxX = 0;
- var maxY = 0;
- for (var i = 0; i < markers.length; i++) {
- var marker = markers[i];
- if (marker.getModelId() === self.getId()) {
- if (marker instanceof Alias) {
- minX = Math.min(minX, marker.getX());
- minY = Math.min(minY, marker.getY());
- maxX = Math.max(maxX, marker.getX() + marker.getWidth());
- maxY = Math.max(maxY, marker.getY() + marker.getHeight());
- } else if (marker instanceof Reaction) {
- minX = Math.min(minX, marker.getCenter().x);
- minY = Math.min(minY, marker.getCenter().y);
- maxX = Math.max(maxX, marker.getCenter().x);
- maxY = Math.max(maxY, marker.getCenter().y);
- } else {
- var markerBounds = marker.getBounds();
- var p1 = self.fromLatLngToPoint(markerBounds.getNorthEast());
- var p2 = self.fromLatLngToPoint(markerBounds.getSouthWest());
-
- minX = Math.min(minX, p2.x);
- minY = Math.min(minY, p1.y);
- maxX = Math.max(maxX, p1.x);
- maxY = Math.max(maxY, p2.y);
+ if (self.isInitialized()) {
+ var canvas = self.getMapCanvas();
+ if (canvas !== undefined && bioEntities.length > 0) {
+ var minX = self.getModel().getWidth();
+ var minY = self.getModel().getHeight();
+ var maxX = 0;
+ var maxY = 0;
+ for (var i = 0; i < bioEntities.length; i++) {
+ var bioEntity = bioEntities[i];
+ if (bioEntity.getModelId() === self.getId()) {
+ if (bioEntity instanceof Alias) {
+ minX = Math.min(minX, bioEntity.getX());
+ minY = Math.min(minY, bioEntity.getY());
+ maxX = Math.max(maxX, bioEntity.getX() + bioEntity.getWidth());
+ maxY = Math.max(maxY, bioEntity.getY() + bioEntity.getHeight());
+ } else if (bioEntity instanceof Reaction) {
+ minX = Math.min(minX, bioEntity.getCenter().x);
+ minY = Math.min(minY, bioEntity.getCenter().y);
+ maxX = Math.max(maxX, bioEntity.getCenter().x);
+ maxY = Math.max(maxY, bioEntity.getCenter().y);
+ } else {
+ throw new Error("Unknown BioEntity class: " + bioEntity);
+ }
}
}
- }
- var currentBounds = self.getBounds();
+ var currentBounds = self.getBounds();
- var xScale = (maxX - minX) / (currentBounds.p1.x - currentBounds.p2.x);
- var yScale = (maxY - minY) / (currentBounds.p2.y - currentBounds.p1.y);
+ var xScale = (maxX - minX) / (currentBounds.getRightBottom().x - currentBounds.getTopLeft().x);
+ var yScale = (maxY - minY) / (currentBounds.getRightBottom().y - currentBounds.getTopLeft().y);
- var scale = Math.max(xScale, yScale);
+ var scale = Math.max(xScale, yScale);
- var zoom = self.getZoom();
+ var zoom = self.getZoom();
- while (scale > 1) {
- zoom--;
- scale /= 2;
- }
- if (scale <= 1e-6) {
- zoom = self.getModel().getMaxZoom();
- } else {
- while (scale < 0.5) {
- zoom++;
- scale *= 2;
+ while (scale > 1) {
+ zoom--;
+ scale /= 2;
+ }
+ if (scale <= 1e-6) {
+ zoom = self.getModel().getMaxZoom();
+ } else {
+ while (scale < 0.5) {
+ zoom++;
+ scale *= 2;
+ }
}
- }
- if (zoom > self.getModel().getMaxZoom()) {
- zoom = self.getModel().getMaxZoom();
+ if (zoom > self.getModel().getMaxZoom()) {
+ zoom = self.getModel().getMaxZoom();
+ }
+ var center = new Point((minX + maxX) / 2, (minY + maxY) / 2);
+ return Promise.all([canvas.setCenter(center), canvas.setZoom(zoom)]);
}
- var center = new google.maps.Point((minX + maxX) / 2, (minY + maxY) / 2);
- var centerLatLng = self.fromPointToLatLng(center);
- return Promise.all([map.setCenter(centerLatLng), map.setZoom(zoom)]);
}
return Promise.resolve();
};
+/**
+ *
+ * @param {Project} project
+ */
AbstractCustomMap.prototype.setProject = function (project) {
this._project = project;
};
+
+/**
+ *
+ * @returns {Project}
+ */
AbstractCustomMap.prototype.getProject = function () {
return this._project;
};
+/**
+ *
+ * @param {ServerConnector} serverConnector
+ */
+AbstractCustomMap.prototype.setServerConnector = function (serverConnector) {
+ this._serverConnector = serverConnector;
+};
+
+/**
+ *
+ * @returns {ServerConnector}
+ */
+AbstractCustomMap.prototype.getServerConnector = function () {
+ return this._serverConnector;
+};
+
AbstractCustomMap.prototype.destroy = function () {
$(this.getElement()).off("touchstart");
};
+/**
+ *
+ * @returns {boolean}
+ */
+AbstractCustomMap.prototype.isInitialized = function () {
+ return this.initialized;
+};
+
+/**
+ *
+ * @param {string} type
+ * @param {Object} data
+ * @returns {PromiseLike}
+ */
+AbstractCustomMap.prototype.triggerEvent = function (type, data) {
+ if (type === "map-rightclick") {
+ return this.getMapCanvas().triggerEvent("rightclick", data);
+ } else if (type === "map-click") {
+ return this.getMapCanvas().triggerEvent("click", data);
+ } else if (type === "map-center_changed") {
+ return this.getMapCanvas().triggerEvent("center_changed", data);
+ } else {
+ throw new Error("Don't know how to handle: " + type);
+ }
+};
+
+/**
+ *
+ * @param {HTMLElement} div
+ */
+AbstractCustomMap.prototype.createMapCanvas = function (div) {
+ var self = this;
+
+ var mapCanvasType = self.getProject().getMapCanvasType();
+ if (mapCanvasType === "GOOGLE_MAPS_API") {
+ self.setMapCanvas(new GoogleMapsApiCanvas(div, self.createMapOptions()));
+ } else if (mapCanvasType === "OPEN_LAYERS") {
+ self.setMapCanvas(new OpenLayerCanvas(div, self.createMapOptions()));
+ } else {
+ throw new Error("Unknown mapCanvasType: " + mapCanvasType);
+ }
+ self.registerMapClickEvents();
+};
+
+
module.exports = AbstractCustomMap;
diff --git a/frontend-js/src/main/js/map/ControlType.js b/frontend-js/src/main/js/map/ControlType.js
index a6b80995c12afff5f1335c6f027a29870814d807..9aba0868fe933641990fb124933d97722c444e36 100644
--- a/frontend-js/src/main/js/map/ControlType.js
+++ b/frontend-js/src/main/js/map/ControlType.js
@@ -3,7 +3,7 @@
var ControlType = {
SUBMAP_DIALOGS : "SUBMAP_DIALOGS",
LOGO_IMG : "LOGO_IMG",
- LOGO_2_IMG : "LOGO_2_IMG",
+ LOGO_2_IMG : "LOGO_2_IMG"
};
module.exports = ControlType;
diff --git a/frontend-js/src/main/js/map/CustomMap.js b/frontend-js/src/main/js/map/CustomMap.js
index cfe8a3647c6a28b3644ec970a27dccb82943c507..f2989dc1a5b750fbb098b9664ff09425ed5a28f1 100644
--- a/frontend-js/src/main/js/map/CustomMap.js
+++ b/frontend-js/src/main/js/map/CustomMap.js
@@ -13,20 +13,26 @@ var CustomMapOptions = require('./CustomMapOptions');
var GuiConnector = require('../GuiConnector');
var IdentifiedElement = require('./data/IdentifiedElement');
var DataOverlay = require('./data/DataOverlay');
-var PointData = require('./data/PointData');
var Reaction = require('./data/Reaction');
var ReferenceGenome = require('./data/ReferenceGenome');
var SecurityError = require('../SecurityError');
var Submap = require('./Submap');
+var Bounds = require('./canvas/Bounds');
+var Point = require('./canvas/Point');
+
/**
* Default constructor.
*
- * @param options
+ * @param {CustomMapOptions} options
* CustomMapOptions object representing all parameters needed for map
* creation
+ *
+ * @constructor
+ * @extends AbstractCustomMap
*/
function CustomMap(options) {
+ //@type {HTMLElement[]}
this._controls = [];
if (!(options instanceof CustomMapOptions)) {
@@ -39,17 +45,24 @@ function CustomMap(options) {
this.registerListenerType("onHideOverlay");
this.registerListenerType("onBackgroundOverlayChange");
+ // @type {boolean[]}
this._selectedOverlays = [];
this.customizeGoogleMapView(options.getElement());
this.createMapChangedCallbacks();
- this.overlayCollections = [];
+ /**
+ *
+ * @type {Object.<string, AbstractDbOverlay>}
+ */
+ this.overlayCollections = {};
// which submap is active (where user made interaction for the last time)
+ // @type {number}
this._activeSubmapId = null;
+ // @type {boolean}
this.initialized = true;
// list of reference genomes
@@ -57,6 +70,7 @@ function CustomMap(options) {
this.createSubmaps();
+ //@type {HTMLElement[]}
this._dialogs = [];
}
@@ -67,13 +81,12 @@ CustomMap.prototype.constructor = CustomMap;
* This code must be run after the object is created. It requires to download
* some data via promises.
*
- * @return {Promise} with empty result
+ * @return {PromiseLike} with empty result
*/
CustomMap.prototype.init = function () {
var self = this;
- var sessionData = ServerConnector.getSessionData(self.getProject());
+ var sessionData = self.getServerConnector().getSessionData(self.getProject());
- var openOverlaysPromises = [];
// if we have background overlay stored in the session then restore it
var mapType = sessionData.getSelectedBackgroundOverlay();
// if we have user data overlays stored in the session then restore it
@@ -94,7 +107,7 @@ CustomMap.prototype.init = function () {
}
}
}).then(function () {
- return ServerConnector.getLogoImg()
+ return self.getServerConnector().getLogoImg();
}).then(function (url) {
var logo2 = self.getControl(ControlType.LOGO_2_IMG);
if (!/^(f|ht)tps?:\/\//i.test(url)) {
@@ -118,52 +131,52 @@ CustomMap.prototype.createSubmaps = function () {
* Creates logo and put it on the google map.
*/
CustomMap.prototype.createLogo = function () {
- var logoControlDiv2 = document.createElement('DIV');
- var logo2 = document.createElement('IMG');
- logo2.style.cursor = 'pointer';
- logo2.style.width = "80px";
- logo2.id = ControlType.LOGO_2_IMG;
+ var self = this;
+ var logoControlDiv2 = Functions.createElement({type: "div", index: 0});
+ var logo2 = Functions.createElement({
+ type: 'IMG',
+ style: "cursor: pointer; width: 80px",
+ id: ControlType.LOGO_2_IMG,
+ onclick: function () {
+ return self.getServerConnector().getLogoLink().then(function (url) {
+ var win = window.open(url, '_blank');
+ win.focus();
+ }).catch(GuiConnector.alert);
+ }
+ });
this.addControl(logo2);
logoControlDiv2.appendChild(logo2);
- google.maps.event.addDomListener(logo2, 'click', function () {
- return ServerConnector.getLogoLink().then(function (url) {
- var win = window.open(url, '_blank');
- win.focus();
- });
- });
- logoControlDiv2.index = 0; // used for ordering
- this.getGoogleMap().controls[google.maps.ControlPosition.LEFT_BOTTOM].push(logoControlDiv2);
- var logoControlDiv = document.createElement('DIV');
- logoControlDiv.style.padding = '5px';
+ this.getMapCanvas().addLeftBottomControl(logoControlDiv2);
- var logo = document.createElement('IMG');
- logo.src = GuiConnector.getImgPrefix() + GuiConnector.getLcsbLogoImg(this.bigButtons);
- logo.style.cursor = 'pointer';
- logo.id = ControlType.LOGO_IMG;
+ var logoControlDiv = Functions.createElement({type: "div", style: "padding: 5px", index: 1});
+ var logo = Functions.createElement({
+ type: "IMG",
+ src: GuiConnector.getImgPrefix() + GuiConnector.getLcsbLogoImg(this.bigButtons),
+ style: "cursor: pointer",
+ id: ControlType.LOGO_IMG,
+ onclick: function () {
+ var win = window.open('http://wwwen.uni.lu/lcsb/', '_blank');
+ win.focus();
+ }
+ });
this.addControl(logo);
-
logoControlDiv.appendChild(logo);
- google.maps.event.addDomListener(logo, 'click', function () {
- var win = window.open('http://wwwen.uni.lu/lcsb/', '_blank');
- win.focus();
- });
- logoControlDiv.index = 1; // used for ordering
- this.getGoogleMap().controls[google.maps.ControlPosition.RIGHT_BOTTOM].push(logoControlDiv);
+ this.getMapCanvas().addRightBottomControl(logoControlDiv);
};
/**
* Clear all AbstractDbOverlay.
+ *
+ * @returns {PromiseLike}
*/
CustomMap.prototype.clearDbOverlays = function () {
var promises = [];
- for (var overlayName in this.overlayCollections) {
- if (this.overlayCollections.hasOwnProperty(overlayName)) {
- var collection = this.overlayCollections[overlayName];
- promises.push(collection.clear());
- }
+ var overlays = this.getDbOverlays();
+ for (var i = 0; i < overlays.length; i++) {
+ promises.push(overlays[i].clear());
}
return Promise.all(promises);
};
@@ -171,8 +184,10 @@ CustomMap.prototype.clearDbOverlays = function () {
/**
* Open data overlay given in the parameter.
*
- * @param param
+ * @param {DataOverlay|number|string} param
* identifier or DataOverlay identifying data overlay to open
+ *
+ * @returns {PromiseLike|Promise}
*/
CustomMap.prototype.openDataOverlay = function (param) {
logger.debug("Opening data overlay: " + param);
@@ -212,7 +227,7 @@ CustomMap.prototype.openDataOverlay = function (param) {
for (var i = 0; i < visibleDataOverlays.length; i++) {
ids.push(visibleDataOverlays[i].getId());
}
- ServerConnector.getSessionData(self.getProject()).setVisibleOverlays(ids);
+ self.getServerConnector().getSessionData(self.getProject()).setVisibleOverlays(ids);
return self.redrawSelectedDataOverlays();
}).then(function () {
var backgroundToOpen;
@@ -231,10 +246,10 @@ CustomMap.prototype.openDataOverlay = function (param) {
});
}
} else {
- if (identifier.toString() === self.getGoogleMap().getMapTypeId()) {
+ if (identifier.toString() === self.getMapCanvas().getBackgroundId()) {
return Promise.resolve();
} else {
- self.getGoogleMap().setMapTypeId(identifier.toString());
+ self.getMapCanvas().setBackgroundId(identifier.toString());
var submaps = self.getSubmaps();
for (var i = 0; i < submaps.length; i++) {
@@ -251,10 +266,12 @@ CustomMap.prototype.openDataOverlay = function (param) {
};
/**
- * Returns data overlay that is used as a background.
+ * Returns {DataOverlay} that is used as a background.
+ *
+ * @returns {DataOverlay}
*/
CustomMap.prototype.getBackgroundDataOverlay = function () {
- var identifier = parseInt(this.getGoogleMap().getMapTypeId());
+ var identifier = parseInt(this.getMapCanvas().getBackgroundId());
var overlays = this.getProject().getDataOverlays();
for (var i = 0; i < overlays.length; i++) {
var overlay = overlays[i];
@@ -268,7 +285,7 @@ CustomMap.prototype.getBackgroundDataOverlay = function () {
/**
* Register AbstractDbOverlay in the map.
*
- * @param dbOverlay
+ * @param {AbstractDbOverlay} dbOverlay
* database overlay to be connected to the map
*/
CustomMap.prototype.registerDbOverlay = function (dbOverlay) {
@@ -276,14 +293,9 @@ CustomMap.prototype.registerDbOverlay = function (dbOverlay) {
this.overlayCollections[dbOverlay.getName()] = dbOverlay;
- dbOverlay.mapOverlays = {
- ALIAS: [],
- REACTION: [],
- POINT: []
- };
if (dbOverlay.getName() !== undefined) {
- if (dbOverlay.getName() === "search" || dbOverlay.getName().startsWith("plugin")) {
+ if (dbOverlay.getName() === "search" || dbOverlay.getName().indexOf("plugin") === 0) {
dbOverlay.addListener("onSearch", function (e) {
return self.renderOverlayCollection({
overlayCollection: dbOverlay,
@@ -323,14 +335,14 @@ CustomMap.prototype.registerDbOverlay = function (dbOverlay) {
/**
* Refresh comment list.
*
- * @return promise that is resolved when comment list is refreshed
+ * @return {PromiseLike} promise that is resolved when comment list is refreshed
*/
CustomMap.prototype.refreshComments = function () {
var self = this;
var commentDbOverlay = self.getOverlayByName("comment");
if (commentDbOverlay !== undefined) {
- if (ServerConnector.getSessionData(self.getProject()).getShowComments()) {
+ if (self.getServerConnector().getSessionData(self.getProject()).getShowComments()) {
return commentDbOverlay.refresh();
} else {
return commentDbOverlay.clear();
@@ -342,44 +354,59 @@ CustomMap.prototype.refreshComments = function () {
/**
* Turns on/off drawing module on google maps.
*/
-CustomMap.prototype.turnOnOffDrawing = function () {
- var model = this.getSubmapById(this.getActiveSubmapId());
- if (model !== undefined) {
- model._turnOnOffDrawing();
+CustomMap.prototype.toggleDrawing = function () {
+ var submap = this.getSubmapById(this.getActiveSubmapId());
+ if (submap !== undefined) {
+ submap.getMapCanvas().toggleDrawing();
} else {
throw new Error("Cannot find submodel with id: " + this.getActiveSubmapId());
}
};
-CustomMap.prototype.refreshMarkers = function (force) {
+/**
+ *
+ * @returns {PromiseLike}
+ */
+CustomMap.prototype.refreshMarkers = function () {
+ var promises = [];
logger.debug("Refresh Markers: ");
- for (var overlayName in this.overlayCollections) {
- if (this.overlayCollections.hasOwnProperty(overlayName)) {
- var collection = this.overlayCollections[overlayName];
- this.refreshOverlayMarkers(collection, force);
- }
+
+ var overlays = this.getDbOverlays();
+ for (var i = 0; i < overlays.length; i++) {
+ promises.push(this.refreshOverlayMarkers(overlays[i]));
}
+
+ return Promise.all(promises);
};
-CustomMap.prototype.refreshOverlayMarkers = function (overlay, force) {
+/**
+ *
+ * @param {AbstractDbOverlay} overlay
+ * @returns {PromiseLike}
+ */
+CustomMap.prototype.refreshOverlayMarkers = function (overlay) {
+ var promises = [];
var self = this;
- logger.debug("Refresh overlay: " + overlay.name);
+ logger.debug("Refresh overlay: " + overlay.getName());
- if (!this.isMarkerOptimization() || force) {
- self.getMarkerSurfaceCollection().refreshOverlayMarkers(overlay);
- var submaps = self.getSubmaps();
- for (var i = 0; i < submaps.length; i++) {
- submaps[i].getMarkerSurfaceCollection().refreshOverlayMarkers(overlay);
+ promises.push(self.getMarkerSurfaceCollection().refreshOverlayMarkers(overlay));
+ var submaps = self.getSubmaps();
+ for (var i = 0; i < submaps.length; i++) {
+ if (submaps[i].isInitialized()) {
+ promises.push(submaps[i].getMarkerSurfaceCollection().refreshOverlayMarkers(overlay));
}
}
+ return Promise.all(promises);
};
/**
* Returns HTML div that is attached to jQuery dialog that should be used for
* opening submap.
*
- * @param id
+ * @param {number} id
* identifier of the submap
+ *
+ * @returns {HTMLElement}
*/
CustomMap.prototype.getSubmapDialogDiv = function (id) {
var dialogDiv = this._dialogs[id];
@@ -399,6 +426,9 @@ CustomMap.prototype.getSubmapDialogDiv = function (id) {
/**
* Opens a dialog with a submodel.
+ *
+ * @param {number} id
+ * @returns {PromiseLike}
*/
CustomMap.prototype.openSubmap = function (id) {
var self = this;
@@ -406,31 +436,25 @@ CustomMap.prototype.openSubmap = function (id) {
if (submap === null) {
throw new Error("Unknown submap for id: " + id);
} else if (submap !== this) {
- var wasInitialized = submap.initialized;
+ var wasInitialized = submap.isInitialized();
var dialogDiv = self.getSubmapDialogDiv(id);
submap.open(dialogDiv);
- // we have to perform it on top map, because on submaps id is different
- return this.openDataOverlay(self.getGoogleMap().getMapTypeId()).then(function () {
+ return this.openDataOverlay(self.getMapCanvas().getBackgroundId()).then(function () {
if (!wasInitialized) {
// now we have to visualize overlays
- var overlayIds = [];
-
- // get list of overlays
- for (var key in self._selectedOverlays) {
- if (self._selectedOverlays.hasOwnProperty(key) && self._selectedOverlays[key] === true) {
- overlayIds.push(key);
+ return self.getVisibleDataOverlays().then(function (overlays) {
+ var promises = [];
+ // show overlays that should be visualized (resize or show them)
+ for (var i = 0; i < overlays.length; i++) {
+ promises.push(submap._showSelectedDataOverlay(overlays[i].getId(), i, overlays.length));
}
- }
-
- // show overlays that should be visualized (resize or show them)
- for (var i = 0; i < overlayIds.length; i++) {
- var overlayId = overlayIds[i];
- submap._showSelectedDataOverlay(overlayId, i, overlayIds.length);
- }
- return self.refreshMarkers(true);
+ return Promise.all(promises);
+ }).then(function () {
+ return self.refreshMarkers();
+ });
}
});
} else {
@@ -439,37 +463,37 @@ CustomMap.prototype.openSubmap = function (id) {
};
+/**
+ *
+ * @param {HTMLElement} div
+ */
CustomMap.prototype.customizeGoogleMapView = function (div) {
var self = this;
- var mapOptions = self.createMapOptions();
- self.setGoogleMap(new google.maps.Map(div, mapOptions));
- self.addCenterButton();
- self.setupLayouts();
-
- self.registerMapClickEvents();
+ self.createMapCanvas(div);
self.createLogo();
- // this.createMapVersion();
- google.maps.event.trigger(self.getGoogleMap(), 'resize');
- google.maps.event.trigger(self.getGoogleMap(), 'maptypeid_changed');
- google.maps.event.trigger(self.getGoogleMap(), 'projection_changed');
+
+ self.getMapCanvas().triggerListeners('resize');
+ // noinspection SpellCheckingInspection
+ self.getMapCanvas().triggerListeners('maptypeid_changed');
+ self.getMapCanvas().triggerListeners('projection_changed');
// center map and zoom in to fit into browser window if there is no
// information about coordinates in the session
- if (ServerConnector.getSessionData(self.getProject()).getCenter(self.getModel()) === undefined &&
- (self.getModel().getDefaultCenterX() === undefined ||
- self.getModel().getDefaultCenterY() === undefined ||
- self.getModel().getDefaultZoomLevel() === undefined ||
- self.getModel().getDefaultCenterX() === null ||
- self.getModel().getDefaultCenterY() === null ||
- self.getModel().getDefaultZoomLevel() === null
+
+ var x = self.getModel().getDefaultCenterX();
+ var y = self.getModel().getDefaultCenterY();
+ var zoom = self.getModel().getDefaultZoomLevel();
+ if (self.getServerConnector().getSessionData(self.getProject()).getCenter(self.getModel()) === undefined &&
+ (x === undefined || y === undefined || zoom === undefined ||
+ x === null || y === null || zoom === null
)) {
- var bounds = new google.maps.LatLngBounds();
- bounds.extend(self.getTopLeftLatLng());
- bounds.extend(self.getBottomRightLatLng());
+ var bounds = new Bounds();
+ bounds.extend(self.getTopLeft());
+ bounds.extend(self.getBottomRight());
- return self.getGoogleMap().fitBounds(bounds);
+ self.getMapCanvas().fitBounds(bounds);
}
};
@@ -480,11 +504,12 @@ CustomMap.prototype.customizeGoogleMapView = function (div) {
CustomMap.prototype.createMapChangedCallbacks = function () {
this._createMapChangedCallbacks();
var self = this;
- var sessionData = ServerConnector.getSessionData(self.getProject());
+ var sessionData = self.getServerConnector().getSessionData(self.getProject());
// listener for changing type of background overlay
- google.maps.event.addListener(self.getGoogleMap(), 'maptypeid_changed', function () {
- sessionData.setSelectedBackgroundOverlay(self.getGoogleMap().getMapTypeId());
+ // noinspection SpellCheckingInspection
+ this.getMapCanvas().addListener('maptypeid_changed', function () {
+ sessionData.setSelectedBackgroundOverlay(self.getMapCanvas().getBackgroundId());
});
};
@@ -492,9 +517,9 @@ CustomMap.prototype.createMapChangedCallbacks = function () {
/**
* Returns submap (or this map) by id.
*
- * @param identifier
+ * @param {number|string} identifier
* identifier of the submap
- * @returns AbstractCustomMap (submap or this map) with given identifier of the model
+ * @returns {AbstractCustomMap} (submap or this map) with given identifier of the model
*/
CustomMap.prototype.getSubmapById = function (identifier) {
identifier = parseInt(identifier);
@@ -510,10 +535,13 @@ CustomMap.prototype.getSubmapById = function (identifier) {
return null;
};
+/**
+ *
+ */
CustomMap.prototype.removeSelection = function () {
var model = this.getSubmapById(this.getActiveSubmapId());
if (model !== null) {
- model._removeSelection();
+ model.getMapCanvas().removeSelection();
} else {
throw new Error("Cannot find submap with id: " + this.getActiveSubmapId());
}
@@ -522,9 +550,10 @@ CustomMap.prototype.removeSelection = function () {
/**
* Removes overlay from visualization.
*
- * @param identifier
+ * @param {number} identifier
* identifier of overlay to remove
*
+ * @returns {PromiseLike}
*/
CustomMap.prototype.hideDataOverlay = function (identifier) {
var self = this;
@@ -542,7 +571,7 @@ CustomMap.prototype.hideDataOverlay = function (identifier) {
for (var i = 0; i < visibleDataOverlays.length; i++) {
ids.push(visibleDataOverlays[i].getId());
}
- ServerConnector.getSessionData(self.getProject()).setVisibleOverlays(ids);
+ self.getServerConnector().getSessionData(self.getProject()).setVisibleOverlays(ids);
return self.redrawSelectedDataOverlays();
}).then(function () {
return self.getProject().getDataOverlayById(identifier);
@@ -554,6 +583,8 @@ CustomMap.prototype.hideDataOverlay = function (identifier) {
/**
* Redrawing selected overlays.
+ *
+ * @returns {PromiseLike|Promise}
*/
CustomMap.prototype.redrawSelectedDataOverlays = function () {
logger.debug("Redrawing overlays");
@@ -570,43 +601,50 @@ CustomMap.prototype.redrawSelectedDataOverlays = function () {
promises.push(self.showSelectedDataOverlay(overlayId, i, visibleDataOverlays.length));
}
}
- return Promise.all(promises).then(function () {
- // hide overlays that were visible
- for (var key in self.selectedLayoutOverlays) {
- if (!self._selectedOverlays.hasOwnProperty(key) || self._selectedOverlays[key] === false) {
- if (self.layoutContainsOverlays(key)) {
- self.hideSelectedLayout(key);
- }
- }
+ return Promise.all(promises);
+ }).then(function () {
+ var promises = [];
+ // hide overlays that were visible
+ var overlays = self.getProject().getDataOverlays();
+ for (var i = 0; i < overlays.length; i++) {
+ var id = overlays[i].getId();
+ if (!self._selectedOverlays[id] && self.layoutContainsOverlays(id)) {
+ promises.push(self.hideSelectedLayout(id));
}
- return self.refreshInfoWindows();
- });
+ }
+ return Promise.all(promises);
});
};
/**
* Hides overlay on the map and all submaps
*
- * @param overlayId
+ * @param {number} overlayId
* identifier of a overlay to hide
+ *
+ * @returns {Promise}
*/
CustomMap.prototype.hideSelectedLayout = function (overlayId) {
- this._hideSelectedLayout(overlayId);
+ var promises = [];
+ promises.push(this._hideSelectedLayout(overlayId));
for (var i = 0; i < this.submaps.length; i++) {
- this.submaps[i]._hideSelectedLayout(overlayId);
+ promises.push(this.submaps[i]._hideSelectedLayout(overlayId));
}
+ return Promise.all(promises);
};
/**
* Resize(refresh) overlay on the map and all submaps. Resizing should be called
* when number of overlays to visualize change.
*
- * @param overlayId
+ * @param {number} overlayId
* identifier of overlay to refresh
- * @param index
+ * @param {number} index
* position of the overlay in list of overlays that we visualize
- * @param length
+ * @param {number} length
* number of overlays that we currently visualize
+ *
+ * @returns {PromiseLike}
*/
CustomMap.prototype.resizeSelectedDataOverlay = function (overlayId, index, length) {
logger.debug("Resize overlay: " + overlayId);
@@ -621,12 +659,14 @@ CustomMap.prototype.resizeSelectedDataOverlay = function (overlayId, index, leng
/**
* Show overlay on the map and all submaps.
*
- * @param overlayId
+ * @param {number} overlayId
* identifier of overlay to show
- * @param index
+ * @param {number} index
* position of the overlay in list of overlays that we visualize
- * @param length
+ * @param {number} length
* number of overlays that we currently visualize
+ *
+ * @returns {PromiseLike}
*/
CustomMap.prototype.showSelectedDataOverlay = function (overlayId, index, length) {
logger.debug("Show overlay: " + overlayId);
@@ -643,22 +683,22 @@ CustomMap.prototype.showSelectedDataOverlay = function (overlayId, index, length
* This method checks if the overlay contains any overlays (like AliasSurface or
* ReactionSurface) that is currently visible on the map.
*
- * @param overlayId
+ * @param {number} overlayId
* identifier of the overlay
- * @returns {Boolean}: <code>true</code> if the overlay contains overlays to
+ * @returns {boolean} <code>true</code> if the overlay contains overlays to
* visualize, <code>false</code> otherwise
*/
CustomMap.prototype.layoutContainsOverlays = function (overlayId) {
// first, check top map
- if (this.selectedLayoutOverlays.hasOwnProperty(overlayId) && this.selectedLayoutOverlays[overlayId].length > 0) {
+ if (this.selectedLayoutOverlays[overlayId] !== undefined && this.selectedLayoutOverlays[overlayId].length > 0) {
return true;
}
// now check all submaps
for (var i = 0; i < this.submaps.length; i++) {
- if (this.submaps[i].initialized) {
- if (this.submaps[i].selectedLayoutOverlays.hasOwnProperty(overlayId)
+ if (this.submaps[i].isInitialized()) {
+ if (this.submaps[i].selectedLayoutOverlays[overlayId] !== undefined
&& this.submaps[i].selectedLayoutOverlays[overlayId].length > 0) {
return true;
}
@@ -667,39 +707,15 @@ CustomMap.prototype.layoutContainsOverlays = function (overlayId) {
return false;
};
-/**
- * Refresh content of all {@link AliasInfoWindow} in this map and all submaps.
- */
-CustomMap.prototype.refreshInfoWindows = function () {
- var promises = [];
- promises.push(this._refreshInfoWindows());
- // now check all submaps
- for (var i = 0; i < this.submaps.length; i++) {
- promises.push(this.submaps[i]._refreshInfoWindows());
- }
- return Promise.all(promises);
-};
-
-/**
- * Opens {@link AliasInfoWindow} for an {@link Alias}.
- *
- * @param alias
- * {@link Alias}
- * @param marker google.maps.Marker object
- */
-CustomMap.prototype.openInfoWindowForAlias = function (alias, marker) {
- logger.debug("Opening info window for alias: " + alias.getId() + ", model: " + alias.getModelId());
- var submap = this.getSubmapById(alias.getModelId());
- return submap._openInfoWindowForAlias(alias, marker);
-};
-
/**
* Renders markers, lines, etc. for elements highlighted in OverlayCollection.
*
- * @param params: {overlayCollection, fitBounds}
- * overlayCollection - to be processed
- * fitBounds - <code>true</code> if the borders should fit bounds after creating
+ * @param {boolean} params.fitBounds <code>true</code> if the borders should fit bounds after creating
* all elements
+ * @param {AbstractDbOverlay} params.overlayCollection to be processed
+ *
+ * @param params
+ * @returns {PromiseLike}
*/
CustomMap.prototype.renderOverlayCollection = function (params) {
var self = this;
@@ -718,17 +734,8 @@ CustomMap.prototype.renderOverlayCollection = function (params) {
promises.push(submaps[i].getMarkerSurfaceCollection().renderOverlay(identifiedElements, overlayCollection));
}
return Promise.all(promises);
- }).then(function (mapMarkers) {
- return Promise.each(elements, function (element) {
- var infoWindow = self.getInfoWindowForIdentifiedElement(element);
- if (infoWindow !== null && infoWindow !== undefined) {
- return self.retrieveOverlayDetailDataForElement(element, infoWindow.getOverlayFullViewArray()).then(function () {
- return self.updateInfoWindowForIdentifiedElement(element);
- });
- }
- });
}).then(function () {
- return self.fetchIdentifiedElements(elements);
+ return self.fetchIdentifiedElements(elements, true);
}).then(function (fullElements) {
var promises = [];
if (elements.length > 0 && fitBounds) {
@@ -740,6 +747,12 @@ CustomMap.prototype.renderOverlayCollection = function (params) {
});
};
+/**
+ *
+ * @param {IdentifiedElement[]} identifiedElements
+ * @param {AbstractDbOverlay} overlayDb
+ * @returns {PromiseLike}
+ */
CustomMap.prototype.appendElementsPointingToSubmap = function (identifiedElements, overlayDb) {
var self = this;
var existingElements = {};
@@ -772,76 +785,66 @@ CustomMap.prototype.appendElementsPointingToSubmap = function (identifiedElement
/**
* Opens {@link AbstractInfoWindow} for a marker.
*
- * @param marker
- * {@link AbstractMarker} for which info window should be opened
+ * @param {Marker} [marker]
+ * for which info window should be opened
+ * @param {IdentifiedElement} element
+ * for which info window should be opened
+ *
+ * @returns {PromiseLike<AbstractInfoWindow>|Promise<AbstractInfoWindow>}
*/
CustomMap.prototype.openInfoWindowForIdentifiedElement = function (element, marker) {
var self = this;
var submap = self.getSubmapById(element.getModelId());
logger.debug(element + ": Opening info window");
- // open AliasInfoWindow in a right model
+ var infoWindow;
return submap._openInfoWindowForIdentifiedElement(element, marker).then(function () {
- var infoWindow = submap.returnInfoWindowForIdentifiedElement(element);
+ infoWindow = submap.returnInfoWindowForIdentifiedElement(element);
return self.retrieveOverlayDetailDataForElement(element, infoWindow.getOverlayFullViewArray());
+ }).then(function () {
+ return infoWindow;
});
-
};
/**
* Sends requests to download detailed data about element in all
- * {@link OverlayCollection}.
+ * {OverlayCollection}.
*
- * @param element
+ * @param {IdentifiedElement} element
* element for which we want to have detailed information
+ * @param {Object.<string,boolean>} general
*/
CustomMap.prototype.retrieveOverlayDetailDataForElement = function (element, general) {
var promises = [];
if (general === undefined) {
logger.warn("general param is undefined!");
- general = [];
+ general = {};
}
- for (var overlayName in this.overlayCollections) {
- if (this.overlayCollections.hasOwnProperty(overlayName)) {
- var overlay = this.overlayCollections[overlayName];
-
- var generalRequest = general[overlayName];
- if (generalRequest === undefined) {
- logger.warn("No information about general overlay request for overlay: ", overlayName);
- generalRequest = false;
- }
- generalRequest = generalRequest || (!overlay.allowSearchById() && overlay.allowGeneralSearch());
+ var overlays = this.getDbOverlays();
+ for (var i = 0; i < overlays.length; i++) {
+ var overlay = overlays[i];
- promises.push(overlay.getDetailDataByIdentifiedElement(element, generalRequest));
+ var generalRequest = general[overlay.getName()];
+ if (generalRequest === undefined) {
+ logger.warn("No information about general overlay request for overlay: " + overlay.getName());
+ generalRequest = false;
}
- }
- return Promise.all(promises);
-};
+ generalRequest = generalRequest || (!overlay.allowSearchById() && overlay.allowGeneralSearch());
-/**
- * Updates info window identified by element given as a parameter.
- *
- * @param identifiedElement
- * element for which info window should be updated
- */
-CustomMap.prototype.updateInfoWindowForIdentifiedElement = function (identifiedElement) {
- var infoWindow = this.getInfoWindowForIdentifiedElement(identifiedElement);
- if (infoWindow === null || infoWindow === undefined) {
- return Promise.resolve();
- } else {
- return infoWindow.update();
+ promises.push(overlay.getDetailDataByIdentifiedElement(element, generalRequest));
}
+ return Promise.all(promises);
};
/**
- * Returns data from all {@link OverlayCollection} for a given alias.
+ * Returns data from all {OverlayCollection} for a given alias.
*
- * @param alias
- * {@link Alias} for which overlay data will be returned
- * @param general
+ * @param {Alias} alias
+ * for which overlay data will be returned
+ * @param {Object.<string,boolean>} general
* if true then all elements will be returned, if false then only ones
* available right now in the overlay
- * @returns data from all {@link OverlayCollection} for a given alias
+ * @returns {Promise} of the data from all {OverlayCollection} for a given alias
*/
CustomMap.prototype.getOverlayDataForAlias = function (alias, general) {
var identifiedElement = new IdentifiedElement(alias);
@@ -849,14 +852,12 @@ CustomMap.prototype.getOverlayDataForAlias = function (alias, general) {
};
/**
- * Returns data from all {@link OverlayCollection} for a given reaction.
+ * Returns data from all {OverlayCollection} for a given reaction.
*
- * @param reaction
- * {@link Reaction} for which overlay data will be returned
- * @param general
- * if true then all elements will be returned, if false then only ones
- * available right now in the overlay
- * @returns Promise of data from all {@link OverlayCollection} for a given alias
+ * @param {Reaction} reaction
+ * for which overlay data will be returned
+ * @param {Object.<string,boolean>} general
+ * @returns {Promise} of data from all {OverlayCollection} for a given alias
*/
CustomMap.prototype.getOverlayDataForReaction = function (reaction, general) {
var identifiedElement = new IdentifiedElement(reaction);
@@ -864,12 +865,13 @@ CustomMap.prototype.getOverlayDataForReaction = function (reaction, general) {
};
/**
- * Returns data from all {@link OverlayCollection} for a given {@link PointData}
+ * Returns data from all {OverlayCollection} for a given {PointData}
*
- * @param point
- * {@link PointData} for which overlay data will be returned
- * @returns data from all {@link OverlayCollection} for a given
- * {@link PointData}
+ * @param {Object.<string,boolean>} general
+ * @param {PointData} point
+ * for which overlay data will be returned
+ * @returns {Promise} of data from all {OverlayCollection} for a given
+ * {PointData}
*/
CustomMap.prototype.getOverlayDataForPoint = function (point, general) {
var identifiedElement = new IdentifiedElement(point);
@@ -877,13 +879,14 @@ CustomMap.prototype.getOverlayDataForPoint = function (point, general) {
};
/**
- * Returns data from all {@link OverlayCollection} for element identified by the
+ * Returns data from all {OverlayCollection} for element identified by the
* parameter
*
- * @param identifiedElement
- * {@link IdentifiedElement} for which overlay data will be returned
- * @returns Promise of data from all {@link OverlayCollection} for a given
- * {@link IdentifiedElement}
+ * @param {Object.<string,boolean>} general
+ * @param {IdentifiedElement} identifiedElement
+ * for which overlay data will be returned
+ * @returns {Promise} of data from all {OverlayCollection} for a given
+ * {IdentifiedElement}
*/
CustomMap.prototype.getOverlayDataForIdentifiedElement = function (identifiedElement, general) {
if (general === undefined) {
@@ -892,19 +895,19 @@ CustomMap.prototype.getOverlayDataForIdentifiedElement = function (identifiedEle
}
var promises = [];
var overlays = [];
- for (var overlayName in this.overlayCollections) {
- if (this.overlayCollections.hasOwnProperty(overlayName)) {
- var overlay = this.overlayCollections[overlayName];
- if (overlay.allowGeneralSearch() || overlay.allowSearchById()) {
- var generalFlag = general[overlay.getName()];
- if (generalFlag === undefined) {
- logger.warn("General flag for overlay: " + overlay.getName() + " is not defined, assuming false");
- generalFlag = false;
- }
- overlays.push(overlay);
- promises.push(overlay.getDetailDataByIdentifiedElement(identifiedElement, !overlay.allowSearchById()
- || generalFlag));
+ var allOverlays = this.getDbOverlays();
+ for (var i = 0; i < allOverlays.length; i++) {
+ var overlay = allOverlays[i];
+ if (overlay.allowGeneralSearch() || overlay.allowSearchById()) {
+ var generalFlag = general[overlay.getName()];
+ if (generalFlag === undefined) {
+ logger.warn("General flag for overlay: " + overlay.getName() + " is not defined, assuming false");
+ generalFlag = false;
}
+ overlays.push(overlay);
+ promises.push(overlay.getDetailDataByIdentifiedElement(identifiedElement, !overlay.allowSearchById()
+ || generalFlag));
+
}
}
return Promise.all(promises).then(function (values) {
@@ -919,10 +922,19 @@ CustomMap.prototype.getOverlayDataForIdentifiedElement = function (identifiedEle
});
};
+/**
+ *
+ * @param {string} name
+ * @returns {AbstractDbOverlay}
+ */
CustomMap.prototype.getOverlayByName = function (name) {
return this.overlayCollections[name];
};
+/**
+ *
+ * @returns {AbstractDbOverlay[]}
+ */
CustomMap.prototype.getDbOverlays = function () {
var result = [];
for (var overlayName in this.overlayCollections) {
@@ -936,10 +948,10 @@ CustomMap.prototype.getDbOverlays = function () {
/**
* Returns {@link AbstractInfoWindow} for element identified by the parameter.
*
- * @param identifiedElement
- * {@link IdentifiedElement} that determines for which element we want
- * {@link AbstractInfoWindow}
- * @returns {@link AbstractInfoWindow} for element identified by the parameter
+ * @param {IdentifiedElement} identifiedElement
+ * that determines for which element we want
+ * {AbstractInfoWindow}
+ * @returns {AbstractInfoWindow} for element identified by the parameter
*/
CustomMap.prototype.getInfoWindowForIdentifiedElement = function (identifiedElement) {
var model = this.getSubmapById(identifiedElement.modelId);
@@ -951,29 +963,52 @@ CustomMap.prototype.getInfoWindowForIdentifiedElement = function (identifiedElem
} else if (identifiedElement.type === "REACTION") {
infoWindow = model.getReactionInfoWindowById(identifiedElement.getId());
} else {
- throw new Error("Unknown type of IdentifiedElement: ", identifiedElement);
+ throw new Error("Unknown type of IdentifiedElement: " + identifiedElement.type);
}
return infoWindow;
};
+/**
+ *
+ * @returns {number}
+ */
CustomMap.prototype.getActiveSubmapId = function () {
return this._activeSubmapId;
};
+/**
+ *
+ * @param {number} submapId
+ */
CustomMap.prototype.setActiveSubmapId = function (submapId) {
this._activeSubmapId = submapId;
};
+/**
+ *
+ * @param {Point} coordinates
+ */
CustomMap.prototype.setActiveSubmapClickCoordinates = function (coordinates) {
- if (!(coordinates instanceof google.maps.Point)) {
- throw new Error("Coordinates must be provided as google.maps.Point object, but found: " + coordinates);
+ if (!(coordinates instanceof Point)) {
+ throw new Error("Coordinates must be provided as Point object, but found: " + coordinates);
}
this._activeSubmapCoordinates = coordinates;
};
+
+/**
+ *
+ * @returns {Point}
+ */
CustomMap.prototype.getActiveSubmapClickCoordinates = function () {
return this._activeSubmapCoordinates;
};
+/**
+ *
+ * @param {string} type
+ * @param {string} version
+ * @returns {PromiseLike}
+ */
CustomMap.prototype.getReferenceGenome = function (type, version) {
var self = this;
if (self.getProject().getOrganism() === undefined) {
@@ -984,10 +1019,10 @@ CustomMap.prototype.getReferenceGenome = function (type, version) {
self._referenceGenome[type] = [];
}
if (self._referenceGenome[type][version] === undefined) {
- return ServerConnector.getReferenceGenome({
+ return self.getServerConnector().getReferenceGenome({
type: type,
version: version,
- organism: self.getProject().getOrganism().getResource(),
+ organism: self.getProject().getOrganism().getResource()
}).then(function (genome) {
self._referenceGenome[type][version] = genome;
return genome;
@@ -997,14 +1032,18 @@ CustomMap.prototype.getReferenceGenome = function (type, version) {
}
};
+/**
+ *
+ * @returns {CustomMap}
+ */
CustomMap.prototype.getTopMap = function () {
return this;
};
-CustomMap.prototype.getTopOverviewImage = function () {
- return this.getProject().getTopOverviewImage();
-};
-
+/**
+ *
+ * @param {HTMLElement} element
+ */
CustomMap.prototype.addControl = function (element) {
if (this._controls[element.id] !== undefined) {
throw new Error("Element with id " + element.id + " already added to controls");
@@ -1015,6 +1054,11 @@ CustomMap.prototype.addControl = function (element) {
this._controls[element.id] = element;
};
+/**
+ *
+ * @param {string} type
+ * @returns {HTMLElement}
+ */
CustomMap.prototype.getControl = function (type) {
if (ControlType[type] === undefined) {
throw new Error("Unknown control type: " + type);
@@ -1022,14 +1066,26 @@ CustomMap.prototype.getControl = function (type) {
return this._controls[type];
};
+/**
+ *
+ * @param {CommentDialog} commentDialog
+ */
CustomMap.prototype.setCommentDialog = function (commentDialog) {
this._commentDialog = commentDialog;
};
+/**
+ *
+ * @returns {CommentDialog}
+ */
CustomMap.prototype.getCommentDialog = function () {
return this._commentDialog;
};
+/**
+ *
+ * @param {ContextMenu} contextMenu
+ */
CustomMap.prototype.setContextMenu = function (contextMenu) {
this._contextMenu = contextMenu;
};
@@ -1042,17 +1098,29 @@ CustomMap.prototype.getContextMenu = function () {
return this._contextMenu;
};
+/**
+ *
+ * @param {SelectionContextMenu} selectionContextMenu
+ */
CustomMap.prototype.setSelectionContextMenu = function (selectionContextMenu) {
this._selectionContextMenu = selectionContextMenu;
};
+/**
+ *
+ * @returns {SelectionContextMenu}
+ */
CustomMap.prototype.getSelectionContextMenu = function () {
return this._selectionContextMenu;
};
+/**
+ *
+ * @returns {PromiseLike|Promise}
+ */
CustomMap.prototype.openCommentDialog = function () {
var self = this;
- return ServerConnector.getClosestElementsByCoordinates({
+ return self.getServerConnector().getClosestElementsByCoordinates({
modelId: this.getActiveSubmapId(),
coordinates: this.getActiveSubmapClickCoordinates()
}).then(function (elements) {
@@ -1074,6 +1142,12 @@ CustomMap.prototype.openCommentDialog = function () {
});
};
+/**
+ *
+ * @param {IdentifiedElement[]} elements
+ * @param {boolean} complete
+ * @returns {PromiseLike<BioEntity[]> | Promise<BioEntity[]>}
+ */
CustomMap.prototype.fetchIdentifiedElements = function (elements, complete) {
var modelIds = [];
var modelElements = [];
@@ -1103,14 +1177,30 @@ CustomMap.prototype.fetchIdentifiedElements = function (elements, complete) {
};
+/**
+ *
+ * @param {string} polygonData
+ */
CustomMap.prototype.setSelectedPolygon = function (polygonData) {
this._selectedPolygon = polygonData;
};
+/**
+ *
+ * @returns {string}
+ */
CustomMap.prototype.getSelectedPolygon = function () {
return this._selectedPolygon;
};
+/**
+ *
+ * @param {number} params.modelId
+ * @param {IdentifiedElement} params.element
+ * @param {Point} params.coordinates
+ *
+ * @returns {PromiseLike|Promise}
+ */
CustomMap.prototype.getDistance = function (params) {
var self = this;
var ie = params.element;
@@ -1120,7 +1210,7 @@ CustomMap.prototype.getDistance = function (params) {
}
var x = params.coordinates.x;
var y = params.coordinates.y;
- var p1 = new google.maps.Point(x, y);
+ var p1 = new Point(x, y);
return model.getByIdentifiedElement(ie).then(function (element) {
if (element instanceof Alias) {
if (element.getX() <= x && element.getX() + element.getWidth() >= x) {
@@ -1143,10 +1233,10 @@ CustomMap.prototype.getDistance = function (params) {
var elementWidth = element.getWidth();
var elementHeight = element.getHeight();
return Math.min( //
- Functions.distance(p1, new google.maps.Point(elementX, y)), //
- Functions.distance(p1, new google.maps.Point(elementX + elementWidth, elementY)), //
- Functions.distance(p1, new google.maps.Point(elementX, elementY + elementHeight)), //
- Functions.distance(p1, new google.maps.Point(elementX + elementWidth, elementY + elementHeight)) //
+ Functions.distance(p1, new Point(elementX, y)), //
+ Functions.distance(p1, new Point(elementX + elementWidth, elementY)), //
+ Functions.distance(p1, new Point(elementX, elementY + elementHeight)), //
+ Functions.distance(p1, new Point(elementX + elementWidth, elementY + elementHeight)) //
);
}
} else if (element instanceof Reaction) {
@@ -1162,6 +1252,10 @@ CustomMap.prototype.getDistance = function (params) {
});
};
+/**
+ *
+ * @returns {Submap[]}
+ */
CustomMap.prototype.getSubmaps = function () {
var submaps = this.submaps;
if (submaps === undefined) {
@@ -1189,12 +1283,16 @@ CustomMap.prototype.destroy = function () {
}
};
+/**
+ *
+ * @returns {Promise<DataOverlay[]>}
+ */
CustomMap.prototype.getVisibleDataOverlays = function () {
var dataOverlayPromises = [];
for (var key in this._selectedOverlays) {
if (this._selectedOverlays.hasOwnProperty(key) && this._selectedOverlays[key] === true) {
- dataOverlayPromises.push(this.getProject().getDataOverlayById(key));
+ dataOverlayPromises.push(this.getProject().getDataOverlayById(parseInt(key)));
}
}
diff --git a/frontend-js/src/main/js/map/CustomMapOptions.js b/frontend-js/src/main/js/map/CustomMapOptions.js
index 090246c7dd12b575327306ceff1993f5a82eecb3..e992f2a2e7237dce44b26653de114abe9e2ce35f 100644
--- a/frontend-js/src/main/js/map/CustomMapOptions.js
+++ b/frontend-js/src/main/js/map/CustomMapOptions.js
@@ -5,6 +5,18 @@ var logger = require('./../logger');
/**
* Object representing information needed for constructing {@link CustomMap}
* objects.
+ *
+ * @param {Object|CustomMapOptions} params
+ * @param {HTMLElement} params.element
+ * @param {Configuration} params.configuration
+ * @param {Project} [params.project]
+ * @param {string} params.projectId
+ * @param {ServerConnector} params.serverConnector
+ * @param {boolean} [params.bigLogo]
+ * @param {boolean} [params.debug]
+ * @param {Object} [params.plugins]
+ *
+ * @constructor
*/
function CustomMapOptions(params) {
if (params.element === undefined) {
@@ -14,17 +26,7 @@ function CustomMapOptions(params) {
this.setConfiguration(params.configuration);
this.setProject(params.project);
this.setProjectId(params.projectId);
-
- if (params.markerOptimization !== undefined) {
- if (typeof params.markerOptimization === "boolean") {
- this._markerOptimization = params.markerOptimization;
- } else {
- logger.warn("markerOptimization must be of type boolean");
- this._markerOptimization = true;
- }
- } else {
- this._markerOptimization = true;
- }
+ this.setServerConnector(params.serverConnector);
if (params.bigLogo !== undefined) {
if (typeof params.bigLogo === "boolean") {
@@ -37,40 +39,51 @@ function CustomMapOptions(params) {
this._bigLogo = false;
}
- if (params.customTouchInterface !== undefined) {
- if (typeof params.customTouchInterface === "boolean") {
- this.setCustomTouchInterface(params.customTouchInterface);
- } else {
- logger.warn("customTouchInterface must be of type boolean");
- this.setCustomTouchInterface(false);
- }
- } else {
- this.setCustomTouchInterface(false);
- }
-
this.setDebug(params.debug);
this.setPlugins(params.plugins);
}
-CustomMapOptions.prototype.isMarkerOptimization = function () {
- return this._markerOptimization;
-};
-
+/**
+ *
+ * @returns {boolean}
+ */
CustomMapOptions.prototype.isBigLogo = function () {
return this._bigLogo;
};
-CustomMapOptions.prototype.isCustomTouchInterface = function () {
- return this._customTouchInterface;
-};
+/**
+ *
+ * @returns {Project}
+ */
CustomMapOptions.prototype.getProject = function () {
return this._project;
};
+
+/**
+ *
+ * @param {Project} project
+ */
CustomMapOptions.prototype.setProject = function (project) {
this._project = project;
};
+/**
+ *
+ * @returns {ServerConnector}
+ */
+CustomMapOptions.prototype.getServerConnector = function () {
+ return this._serverConnector;
+};
+
+/**
+ *
+ * @param {ServerConnector} serverConnector
+ */
+CustomMapOptions.prototype.setServerConnector = function (serverConnector) {
+ this._serverConnector = serverConnector;
+};
+
CustomMapOptions.prototype.getPlugins = function () {
return this._plugins;
};
@@ -81,13 +94,26 @@ CustomMapOptions.prototype.setPlugins = function (plugins) {
this._plugins = plugins;
};
+/**
+ *
+ * @returns {Configuration}
+ */
CustomMapOptions.prototype.getConfiguration = function () {
return this._configuration;
};
+
+/**
+ *
+ * @param {Configuration} configuration
+ */
CustomMapOptions.prototype.setConfiguration = function (configuration) {
this._configuration = configuration;
};
+/**
+ *
+ * @returns {string}
+ */
CustomMapOptions.prototype.getProjectId = function () {
if (this.getProject() !== undefined) {
return this.getProject().getProjectId();
@@ -95,9 +121,19 @@ CustomMapOptions.prototype.getProjectId = function () {
return this._projectId;
}
};
+
+/**
+ *
+ * @param {string} projectId
+ */
CustomMapOptions.prototype.setProjectId = function (projectId) {
this._projectId = projectId;
};
+
+/**
+ *
+ * @param {boolean} debug
+ */
CustomMapOptions.prototype.setDebug = function (debug) {
if (debug !== undefined) {
if (typeof debug !== "boolean") {
@@ -107,17 +143,26 @@ CustomMapOptions.prototype.setDebug = function (debug) {
}
};
-CustomMapOptions.prototype.setCustomTouchInterface = function (customTouchInterface) {
- this._customTouchInterface = customTouchInterface;
-};
-
+/**
+ *
+ * @returns {boolean}
+ */
CustomMapOptions.prototype.isDebug = function () {
return this._debug === true;
};
+/**
+ *
+ * @param {HTMLElement} element
+ */
CustomMapOptions.prototype.setElement = function (element) {
this._element = element;
};
+
+/**
+ *
+ * @returns {HTMLElement}
+ */
CustomMapOptions.prototype.getElement = function () {
return this._element;
};
diff --git a/frontend-js/src/main/js/map/OverlayParser.js b/frontend-js/src/main/js/map/OverlayParser.js
index 8feaa20016c09aedf80b40d5f88c94eac604e83a..72fc466358ac3bc06fb988402834959eca341687 100644
--- a/frontend-js/src/main/js/map/OverlayParser.js
+++ b/frontend-js/src/main/js/map/OverlayParser.js
@@ -15,7 +15,7 @@ OverlayParser.prototype.parse = function (content) {
var lines = content.split("\n");
for (var i = 0; i < lines.length; i++) {
var line = lines[i];
- if (line.startsWith("#")) {
+ if (line.indexOf("#") === 0) {
if (line.indexOf("=") > 0) {
var name = line.substring(1, line.indexOf("=")).trim();
var value = line.substring(line.indexOf("=") + 1).trim();
diff --git a/frontend-js/src/main/js/map/Submap.js b/frontend-js/src/main/js/map/Submap.js
index 289a204f82366062c81cc87c08082b92b769c173..f0519ffa46482cc0c3e7af3fce26623a33fc8f35 100644
--- a/frontend-js/src/main/js/map/Submap.js
+++ b/frontend-js/src/main/js/map/Submap.js
@@ -2,6 +2,7 @@
/* exported logger */
+// noinspection JSUnusedLocalSymbols
var logger = require('../logger');
var AbstractCustomMap = require('./AbstractCustomMap');
var CustomMapOptions = require('./CustomMapOptions');
@@ -10,21 +11,24 @@ var CustomMapOptions = require('./CustomMapOptions');
* Constructor of a submap. Submaps are created on application start. But dialog
* (popup window) is initialized on demand using init function.
*
- * @param customMap
+ * @param {CustomMap} customMap
* parent CustomMap
- * @param id
- * identifier of the submap
+ * @param {MapModel} model
+ *
+ * @constructor
+ * @extends AbstractCustomMap
*/
function Submap(customMap, model) {
this.setCustomMap(customMap);
AbstractCustomMap.call(this, model, new CustomMapOptions({
- element: customMap.getGoogleMap().getDiv(),
- markerOptimization: customMap.isMarkerOptimization(),
+ element: customMap.getElement(),
bigLogo: customMap.isBigLogo(),
- customTouchInterface: customMap.isCustomTouchInterface(),
- project: null,
- debug: customMap.isDebug()
+ project: customMap.getProject(),
+ configuration: customMap.getConfiguration(),
+ projectId: customMap.getProject().getProjectId(),
+ debug: customMap.isDebug(),
+ serverConnector: customMap.getServerConnector()
}));
this.initialized = false;
@@ -38,17 +42,15 @@ Submap.prototype.constructor = Submap;
* This method initializes submap with gui component. Before this point submap
* is created and contains data, but cannot be visualized in the browser.
*
- * @param htmlTag
+ * @param {HTMLElement} htmlTag
* html div tag where google map should be placed
*/
Submap.prototype.open = function (htmlTag) {
var self = this;
- if (!this.initialized) {
+ if (!this.isInitialized()) {
self.setElement(htmlTag);
- var mapOptions = self.createMapOptions();
-
var contentDiv = document.createElement("div");
contentDiv.setAttribute("name", "submap-div-" + self.getId());
contentDiv.style.width = "100%";
@@ -70,33 +72,17 @@ Submap.prototype.open = function (htmlTag) {
of: $(self.getTopMap().getElement())
},
resize: function () {
- google.maps.event.trigger(self.getGoogleMap(), 'resize');
+ self.getMapCanvas().triggerListeners('resize');
}
});
$(self.getElement()).dialog("open");
- self.setGoogleMap(new google.maps.Map(mapDiv, mapOptions));
+ self.createMapCanvas(mapDiv);
self._createMapChangedCallbacks();
- google.maps.event.trigger(self.getGoogleMap(), 'resize');
-
- self.setupLayouts();
-
- self.registerMapClickEvents();
-
- var centerPoint = self.fromPointToLatLng(new google.maps.Point(self.getModel().getWidth() / 2, self.getModel().getHeight() / 2));
- self.getGoogleMap().setCenter(centerPoint);
- self.addCenterButton();
-
- var sessionData = ServerConnector.getSessionData(this.getProject());
- // and now send the zoom level to the client side
- google.maps.event.addListener(self.getGoogleMap(), 'zoom_changed', function () {
- sessionData.setZoomLevel(self.getModel(), self.getGoogleMap().getZoom());
- });
-
- sessionData.setZoomLevel(self.getModel(), self.getGoogleMap().getZoom());
+ self.getMapCanvas().triggerListeners('resize');
self.initialized = true;
} else {
@@ -105,24 +91,44 @@ Submap.prototype.open = function (htmlTag) {
};
+/**
+ *
+ * @param {number} identifier
+ */
Submap.prototype.openDataOverlay = function (identifier) {
- if (this.initialized) {
- this.getGoogleMap().setMapTypeId(identifier.toString());
+ if (this.isInitialized()) {
+ this.getMapCanvas().setBackgroundId(identifier.toString());
}
};
+/**
+ *
+ * @returns {CustomMap}
+ */
Submap.prototype.getTopMap = function () {
return this.getCustomMap();
};
+/**
+ *
+ * @returns {CustomMap}
+ */
Submap.prototype.getCustomMap = function () {
return this._customMap;
};
+/**
+ *
+ * @param {CustomMap} customMap
+ */
Submap.prototype.setCustomMap = function (customMap) {
this._customMap = customMap;
};
+/**
+ *
+ * @returns {Project}
+ */
Submap.prototype.getProject = function () {
return this.getCustomMap().getProject();
};
@@ -130,7 +136,7 @@ Submap.prototype.getProject = function () {
Submap.prototype.destroy = function () {
var self = this;
AbstractCustomMap.prototype.destroy.call(self);
- if (self.initialized) {
+ if (self.isInitialized()) {
$(self.getElement()).dialog("destroy");
}
};
diff --git a/frontend-js/src/main/js/map/canvas/Bounds.js b/frontend-js/src/main/js/map/canvas/Bounds.js
new file mode 100644
index 0000000000000000000000000000000000000000..210e7484774d27156809bd26498fa32e75cb9352
--- /dev/null
+++ b/frontend-js/src/main/js/map/canvas/Bounds.js
@@ -0,0 +1,76 @@
+"use strict";
+
+// noinspection JSUnusedLocalSymbols
+var logger = require('../../logger');
+var Point = require('./Point');
+
+/**
+ *
+ * @param {Point} [p1]
+ * @param {Point} [p2]
+ * @constructor
+ */
+function Bounds(p1, p2) {
+ this._topLeft = undefined;
+ this._rightBottom = undefined;
+ this.extend(p1);
+ this.extend(p2);
+}
+
+/**
+ *
+ * @param {Point} [point]
+ */
+Bounds.prototype.extend = function (point) {
+ if (point !== undefined) {
+ if (point instanceof Bounds) {
+ this.extend(point.getRightBottom());
+ this.extend(point.getTopLeft());
+ } else {
+ if (!(point instanceof Point)) {
+ point = new Point(point);
+ }
+ if (this._topLeft === undefined) {
+ this._topLeft = new Point(point);
+ this._rightBottom = new Point(point);
+ } else {
+ this._topLeft.x = Math.min(this._topLeft.x, point.x);
+ this._topLeft.y = Math.min(this._topLeft.y, point.y);
+
+ this._rightBottom.x = Math.max(this._rightBottom.x, point.x);
+ this._rightBottom.y = Math.max(this._rightBottom.y, point.y);
+ }
+ }
+ }
+};
+
+/**
+ *
+ * @returns {Point}
+ */
+Bounds.prototype.getTopLeft = function () {
+ return this._topLeft;
+};
+
+/**
+ *
+ * @returns {Point}
+ */
+Bounds.prototype.getRightBottom = function () {
+ return this._rightBottom;
+};
+
+/**
+ *
+ * @param {Point} point
+ * @returns {boolean}
+ */
+Bounds.prototype.contains = function (point) {
+ return this._topLeft.x <= point.x && //
+ this._topLeft.y <= point.y && //
+ this._rightBottom.x >= point.x && //
+ this._rightBottom.y >= point.y;
+
+};
+
+module.exports = Bounds;
diff --git a/frontend-js/src/main/js/map/canvas/GoogleMaps/GoogleMapsApiCanvas.js b/frontend-js/src/main/js/map/canvas/GoogleMaps/GoogleMapsApiCanvas.js
new file mode 100644
index 0000000000000000000000000000000000000000..564ffe53fa02244c3789df492487d8040a1b25d5
--- /dev/null
+++ b/frontend-js/src/main/js/map/canvas/GoogleMaps/GoogleMapsApiCanvas.js
@@ -0,0 +1,561 @@
+"use strict";
+
+// noinspection JSUnusedLocalSymbols
+var logger = require('../../../logger');
+
+var Bounds = require('../Bounds');
+var Functions = require('../../../Functions');
+var MapCanvas = require('../MapCanvas');
+var Point = require('../Point');
+
+var GoogleMapsApiInfoWindow = require('./GoogleMapsApiInfoWindow');
+var GoogleMapsApiMarker = require('./GoogleMapsApiMarker');
+var GoogleMapsApiPolyline = require('./GoogleMapsApiPolyline');
+var GoogleMapsApiRectangle = require('./GoogleMapsApiRectangle');
+
+/**
+ *
+ * @param {HTMLElement} element
+ * @param {Object} options
+ * @param {number} options.tileSize
+ * @param {number} options.minZoom
+ * @param {number} options.height
+ * @param {number} options.width
+ * @param {number} options.zoom
+ * @param {Point} options.center
+ * @param {Object[]} options.backgroundOverlays
+ * @constructor
+ * @extends MapCanvas
+ */
+
+function GoogleMapsApiCanvas(element, options) {
+ MapCanvas.call(this, element, options);
+
+ var self = this;
+ self.setGoogleMap(new google.maps.Map(element, self.prepareGoogleMapOptions(options)));
+ self.setupBackgroundOverlays(options.backgroundOverlays);
+ self.addCenterButton();
+
+ google.maps.event.addListener(this.getGoogleMap(), "click", function (e) {
+ return self.callListeners("click", {point: self.fromLatLngToPoint(e.latLng)});
+ });
+ google.maps.event.addListener(this.getGoogleMap(), "rightclick", function (e) {
+ return self.callListeners("rightclick", {point: self.fromLatLngToPoint(e.latLng)});
+ });
+ google.maps.event.addListener(this.getGoogleMap(), "mouseup", function () {
+ return self.callListeners("mouseup");
+ });
+ google.maps.event.addListener(this.getGoogleMap(), "dragstart", function () {
+ return self.callListeners("dragstart");
+ });
+ google.maps.event.addListener(this.getGoogleMap(), "zoom_changed", function () {
+ return self.callListeners("zoom_changed");
+ });
+ google.maps.event.addListener(this.getGoogleMap(), "center_changed", function () {
+ return self.callListeners("center_changed");
+ });
+ google.maps.event.addListener(this.getGoogleMap(), "maptypeid_changed", function () {
+ return self.callListeners("maptypeid_changed");
+ });
+
+}
+
+GoogleMapsApiCanvas.prototype = Object.create(MapCanvas.prototype);
+GoogleMapsApiCanvas.prototype.constructor = GoogleMapsApiCanvas;
+
+/**
+ *
+ * @param {google.maps.Map} map
+ */
+GoogleMapsApiCanvas.prototype.setGoogleMap = function (map) {
+ this._map = map;
+};
+
+/**
+ * Returns google map object associated with this canvas.
+ * @returns {google.maps.Map}
+ */
+GoogleMapsApiCanvas.prototype.getGoogleMap = function () {
+ return this._map;
+};
+
+/**
+ * Creates {google.maps.ImageMapTypeOptions} for specific data overlay.
+ *
+ * @param {string} overlay.directory directory where images for this overlay are hosted
+ * @param {string} overlay.name name of the overlay
+ * @returns {{getTileUrl: function, tileSize: google.maps.Size, maxZoom: number, minZoom: number, radius: number, name: string}}
+ */
+GoogleMapsApiCanvas.prototype.createMapTypeOption = function (overlay) {
+ var self = this;
+ return {
+ // this is a function that will retrieve valid url to png images for
+ // tiles on different zoom levels
+ getTileUrl: function (coord, zoom) {
+ // we have 1 tile on self.getConfiguration().MIN_ZOOM and
+ // therefore must limit tails according to this
+ /* jshint bitwise: false */
+ var maxTileRange = 1 << (zoom - self.getMinZoom());
+ var maxTileXRange = maxTileRange;
+ var maxTileYRange = maxTileRange;
+
+ var width = self.getWidth();
+ var height = self.getHeight();
+ if (width > height) {
+ maxTileYRange = height / width * maxTileRange;
+ } else if (width < height) {
+ maxTileXRange = width / height * maxTileRange;
+ }
+ if (coord.y < 0 || coord.y >= maxTileYRange || coord.x < 0 || coord.x >= maxTileXRange) {
+ return null;
+ }
+ return overlay.directory + "/" + zoom + "/" + coord.x + "/" + coord.y + ".PNG";
+ },
+ tileSize: new google.maps.Size(self.getTileSize(), self.getTileSize()),
+ maxZoom: self.getMaxZoom(),
+ minZoom: self.getMinZoom(),
+ radius: 360,
+ name: overlay.name
+ };
+};
+
+/**
+ * Assigns overlays with images to the google map (which set of images should be
+ * used by google maps api for which overlay).
+ *
+ * @param {{id: number, name:string, directory:string}[]} backgroundOverlays
+ */
+GoogleMapsApiCanvas.prototype.setupBackgroundOverlays = function (backgroundOverlays) {
+ for (var i = 0; i < backgroundOverlays.length; i++) {
+ var overlay = backgroundOverlays[i];
+ var typeOptions = this.createMapTypeOption(overlay);
+ var mapType = new google.maps.ImageMapType(typeOptions);
+ this.getGoogleMap().mapTypes.set(overlay.id.toString(), mapType);
+ }
+ this.getGoogleMap().setMapTypeId(backgroundOverlays[0].id.toString());
+};
+
+/**
+ *
+ * @param {number} options.zoom
+ * @param {Point} options.center
+ * @returns {{center: google.maps.LatLng, rotateControl: boolean, panControl: boolean, mapTypeControl: boolean, zoom: number, streetViewControl: boolean, fullscreenControl: boolean, panControlOptions: {position: *}, zoomControlOptions: {style: string, position: *}}}
+ */
+GoogleMapsApiCanvas.prototype.prepareGoogleMapOptions = function (options) {
+ var self = this;
+ // noinspection SpellCheckingInspection
+ return {
+ center: self.fromPointToLatLng(options.center),
+ rotateControl: true,
+ panControl: true,
+ mapTypeControl: false,
+ zoom: options.zoom,
+ streetViewControl: false,
+ fullscreenControl: false,
+
+ panControlOptions: {
+ position: google.maps.ControlPosition.LEFT_TOP
+ },
+ zoomControlOptions: {
+ style: google.maps.ZoomControlStyle.LARGE,
+ position: google.maps.ControlPosition.LEFT_TOP
+ }
+
+ };
+};
+
+/**
+ * Adds center button to the map.
+ */
+GoogleMapsApiCanvas.prototype.addCenterButton = function () {
+ var self = this;
+ var centerDiv = Functions.createElement({
+ type: "div",
+ style: "padding:5px"
+ });
+ var centerButton = Functions.createElement({
+ type: "a",
+ content: "<i class='fa fa-crosshairs' style='font-size:24px;color:grey'></i> ",
+ title: "center map",
+ href: "#",
+ onclick: function () {
+ var bounds = new Bounds(new Point(0, 0), new Point(self.getWidth(), self.getHeight()));
+ return self.fitBounds(bounds);
+ },
+ xss: false
+ });
+ centerDiv.appendChild(centerButton);
+ self.getGoogleMap().controls[google.maps.ControlPosition.RIGHT_TOP].push(centerDiv);
+};
+
+
+/**
+ * Transforms google.maps.LatLng to tile coordinate (for instance on which tile
+ * mouse clicked).
+ *
+ *
+ * @param {google.maps.LatLng} latLng
+ * coordinates in LatLng format
+ * @param {number} zoom
+ * zoom level at which we want to find coordinates of tile
+ * @return {Point} coordinates of a tile
+ */
+GoogleMapsApiCanvas.prototype.latLngToTile = function (latLng, zoom) {
+ var self = this;
+ var worldCoordinate = self.fromLatLngToPoint(latLng);
+ var pixelCoordinate = new Point(worldCoordinate.x * Math.pow(2, zoom), worldCoordinate.y * Math.pow(2, zoom));
+ return new Point(Math.floor(pixelCoordinate.x / self.getOptions().tileSize), Math
+ .floor(pixelCoordinate.y / self.getOptions().tileSize));
+};
+
+/**
+ *
+ * @param {Point} options.position
+ * @param {string} options.icon
+ * @param {string} [options.id]
+ * @returns {GoogleMapsApiMarker}
+ */
+GoogleMapsApiCanvas.prototype.createMarker = function (options) {
+ if (!(options.position instanceof Point)) {
+ throw new Error("position must be of type Point");
+ }
+ return new GoogleMapsApiMarker({
+ position: options.position,
+ icon: options.icon,
+ id: options.id,
+ map: this
+ });
+};
+
+/**
+ *
+ * @param {Bounds} options.bounds
+ * @param {string} options.id
+ * @param {number} options.fillOpacity
+ * @param {string} options.fillColor
+ * @param {string} options.strokeColor
+ * @param {number} options.strokeOpacity
+ * @param {number} options.strokeWeight
+ * @returns {GoogleMapsApiRectangle}
+ */
+
+GoogleMapsApiCanvas.prototype.createRectangle = function (options) {
+ if (!(options.bounds instanceof Bounds)) {
+ throw new Error("position must be of type Bounds");
+ }
+ options.map = this;
+ return new GoogleMapsApiRectangle(options);
+};
+
+/**
+ *
+ * @param {Point[]} options.path
+ * @param {string} options.strokeColor
+ * @param {number} options.strokeOpacity
+ * @param {number} options.strokeWeight
+ * @returns {GoogleMapsApiPolyline}
+ */
+
+GoogleMapsApiCanvas.prototype.createPolyline = function (options) {
+ options.map = this;
+ return new GoogleMapsApiPolyline(options);
+};
+
+/**
+ *
+ * @param {Point} options.position
+ * @param {GoogleMapsApiMarker} [options.marker]
+ * @param {string} options.id
+ * @returns {GoogleMapsApiInfoWindow}
+ */
+GoogleMapsApiCanvas.prototype.createInfoWindow = function (options) {
+ if (!(options.position instanceof Point)) {
+ throw new Error("position must be of type Point");
+ }
+ return new GoogleMapsApiInfoWindow({
+ position: options.position,
+ marker: options.marker,
+ id: options.id,
+ map: this
+ });
+};
+
+/**
+ *
+ * @param {HTMLElement} element
+ */
+GoogleMapsApiCanvas.prototype.addLeftBottomControl = function (element) {
+ this.getGoogleMap().controls[google.maps.ControlPosition.LEFT_BOTTOM].push(element);
+};
+
+/**
+ *
+ * @param {HTMLElement} element
+ */
+GoogleMapsApiCanvas.prototype.addRightBottomControl = function (element) {
+ this.getGoogleMap().controls[google.maps.ControlPosition.RIGHT_BOTTOM].push(element);
+};
+
+/**
+ * @param {string} type
+ * @param {Object} [data]
+ */
+GoogleMapsApiCanvas.prototype.triggerListeners = function (type, data) {
+ google.maps.event.trigger(this.getGoogleMap(), type, data);
+};
+
+/**
+ * @param {string} type
+ * @param {Object} [data]
+ */
+GoogleMapsApiCanvas.prototype.triggerEvent = function (type, data) {
+ var mev = data;
+ if (type === "click" || type === "rightclick") {
+ var latLng = undefined;
+ if (data.point !== undefined) {
+ latLng = this.fromPointToLatLng(data.point);
+ }
+ mev = {
+ stop: data.stop,
+ latLng: latLng
+ };
+ }
+ return google.maps.event.trigger(this.getGoogleMap(), type, mev);
+};
+
+/**
+ *
+ * @param {Bounds} bounds
+ */
+GoogleMapsApiCanvas.prototype.fitBounds = function (bounds) {
+ if (!(bounds instanceof Bounds)) {
+ throw new Error("Expected bounds but found: " + bounds);
+ }
+ var latLngBounds = new google.maps.LatLngBounds();
+ latLngBounds.extend(this.fromPointToLatLng(bounds.getTopLeft()));
+ latLngBounds.extend(this.fromPointToLatLng(bounds.getRightBottom()));
+
+ this.getGoogleMap().fitBounds(latLngBounds);
+};
+
+/**
+ *
+ * @param {Point} point
+ * @returns {Promise|void}
+ */
+GoogleMapsApiCanvas.prototype.setCenter = function (point) {
+ if (!(point instanceof Point)) {
+ throw new Error("Expected bounds but found: " + bounds);
+ }
+ return this.getGoogleMap().setCenter(this.fromPointToLatLng(point));
+};
+
+/**
+ *
+ * @returns {Point}
+ */
+GoogleMapsApiCanvas.prototype.getCenter = function () {
+ return this.fromLatLngToPoint(this.getGoogleMap().getCenter());
+};
+
+/**
+ *
+ * @returns {number}
+ */
+GoogleMapsApiCanvas.prototype.getZoom = function () {
+ return this.getGoogleMap().getZoom();
+};
+
+/**
+ *
+ * @param zoom
+ * @returns {Promise|void}
+ */
+GoogleMapsApiCanvas.prototype.setZoom = function (zoom) {
+ return this.getGoogleMap().setZoom(zoom);
+};
+
+/**
+ *
+ * @returns {string}
+ */
+GoogleMapsApiCanvas.prototype.getBackgroundId = function () {
+ return this.getGoogleMap().getMapTypeId();
+};
+
+/**
+ *
+ * @param {string|number} backgroundId
+ */
+GoogleMapsApiCanvas.prototype.setBackgroundId = function (backgroundId) {
+ this.getGoogleMap().setMapTypeId(backgroundId.toString());
+};
+
+/**
+ *
+ * @returns {Bounds}
+ */
+GoogleMapsApiCanvas.prototype.getBounds = function () {
+ var self = this;
+ var bounds = self.getGoogleMap().getBounds();
+ var ne = bounds.getNorthEast();
+ var sw = bounds.getSouthWest();
+
+ var p1 = this.fromLatLngToPoint(ne);
+ var p2 = this.fromLatLngToPoint(sw);
+ if (p2.x > p1.x) {
+ p2.x -= 360 * self.pixelsPerLonDegree_ * self.zoomFactor;
+ }
+ return new Bounds(p1, p2);
+};
+
+/*
+* Turns on drawing manager on the map.
+*/
+GoogleMapsApiCanvas.prototype.turnOnDrawing = function () {
+
+ if (this.isDrawingOn()) {
+ logger.warn("Trying to turn on drawing manager, but it is already available.");
+ return;
+ }
+ var self = this;
+ this._drawingManager = new google.maps.drawing.DrawingManager({
+ drawingMode: google.maps.drawing.OverlayType.MARKER,
+ drawingControl: true,
+ drawingControlOptions: {
+ position: google.maps.ControlPosition.TOP_CENTER,
+ drawingModes: [google.maps.drawing.OverlayType.POLYGON]
+ },
+ markerOptions: {
+ icon: 'images/beachflag.png'
+ },
+ circleOptions: {
+ fillColor: '#ffff00',
+ fillOpacity: 1,
+ strokeWeight: 5,
+ clickable: false,
+ editable: true,
+ zIndex: 1
+ }
+ });
+ self._drawingManager.setMap(self.getGoogleMap());
+ self._drawingManager.setDrawingMode(google.maps.drawing.OverlayType.POLYGON);
+
+ google.maps.event.addListener(this._drawingManager, 'overlaycomplete', function (e) {
+ if (e.type !== google.maps.drawing.OverlayType.MARKER) {
+ // Switch back to non-drawing mode after drawing a shape.
+ self._drawingManager.setDrawingMode(null);
+
+ // Add an event listener that selects the newly-drawn shape when the
+ // user mouses down on it.
+ var newShape = e.overlay;
+ newShape.type = e.type;
+ google.maps.event.addListener(newShape, 'rightclick', function (e) {
+ self.setSelectedArea(newShape);
+ newShape.position = e.latLng;
+
+ var polygon = self.areaToString(newShape);
+
+ return self.callListeners("shape-rightclick", {polygon: polygon});
+ });
+ }
+ });
+};
+
+/**
+ * Turns off drawing manager on the map.
+ */
+GoogleMapsApiCanvas.prototype.turnOffDrawing = function () {
+ if (this.isDrawingOn()) {
+ this._drawingManager.setMap(null);
+ this._drawingManager = null;
+ } else {
+ logger.warn("Trying to turn off drawing manager, but it is not available.");
+ }
+};
+
+/**
+ * Checks if the drawing manager for the map is on.
+ *
+ * @returns {boolean}
+ */
+GoogleMapsApiCanvas.prototype.isDrawingOn = function () {
+ return this._drawingManager !== null && this._drawingManager !== undefined;
+};
+
+/**
+ * Sets selectedArea on this map.
+ *
+ *
+ * @param {Object} area
+ */
+GoogleMapsApiCanvas.prototype.setSelectedArea = function (area) {
+ this._selectedArea = area;
+};
+
+/**
+ * Returns selectedArea on this map.
+ *
+ * @returns {Object}
+ */
+GoogleMapsApiCanvas.prototype.getSelectedArea = function () {
+ return this._selectedArea;
+};
+
+/**
+ * Transforms google.maps.Polygon into string with coordinates.
+ *
+ * @param {google.maps.Polygon} area
+ * @returns {string}
+ */
+GoogleMapsApiCanvas.prototype.areaToString = function (area) {
+ var len = area.getPath().length;
+ var path = area.getPath();
+ var res = "";
+ for (var i = 0; i < len; i++) {
+ var point = this.fromLatLngToPoint(path.getAt(i));
+ res += point.x.toFixed(2) + "," + point.y.toFixed(2) + ";";
+ }
+ return res;
+};
+
+/**
+ * Removes selected area (polygon) from the map.
+ */
+GoogleMapsApiCanvas.prototype.removeSelection = function () {
+ if (this._selectedArea) {
+ this._selectedArea.setMap(null);
+ this._selectedArea = null;
+ } else {
+ logger.warn("Cannot remove selected area. No area was selected");
+ }
+};
+
+/**
+ * Transforms coordinates on the map from {Point} to
+ * {google.maps.LatLng}
+ *
+ * @param {Point} point
+ * coordinates in standard x,y format
+ * @return {google.maps.LatLng} coordinates in lat,lng format
+ */
+GoogleMapsApiCanvas.prototype.fromPointToLatLng = function (point) {
+ var tmp = MapCanvas.prototype.pointToLatLng.call(this, point);
+ return new google.maps.LatLng(tmp[0], tmp[1]);
+};
+
+/**
+ * Transforms coordinates on the map from {google.maps.LatLng} to
+ * {Point}
+ *
+ * @param {google.maps.LatLng} latLng
+ * in lat,lng format
+ * @returns {Point} coordinates in x,y format
+ *
+ */
+GoogleMapsApiCanvas.prototype.fromLatLngToPoint = function (latLng) {
+ return MapCanvas.prototype.latLngToPoint.call(this, [latLng.lat(), latLng.lng()]);
+};
+
+
+module.exports = GoogleMapsApiCanvas;
diff --git a/frontend-js/src/main/js/map/canvas/GoogleMaps/GoogleMapsApiInfoWindow.js b/frontend-js/src/main/js/map/canvas/GoogleMaps/GoogleMapsApiInfoWindow.js
new file mode 100644
index 0000000000000000000000000000000000000000..d3f3e12ed14a3553c9ae34c291cc41dc3001be08
--- /dev/null
+++ b/frontend-js/src/main/js/map/canvas/GoogleMaps/GoogleMapsApiInfoWindow.js
@@ -0,0 +1,88 @@
+"use strict";
+
+var InfoWindow = require('../InfoWindow');
+var GoogleMapsApiMarker = require('./GoogleMapsApiMarker');
+
+var logger = require('../../../logger');
+
+/**
+ *
+ * @param {Point} options.position
+ * @param {GoogleMapsApiMarker} [options.marker]
+ * @param {string} options.id
+ * @param {GoogleMapsApiCanvas} options.map
+ *
+ * @constructor
+ * @extends InfoWindow
+ */
+function GoogleMapsApiInfoWindow(options) {
+ InfoWindow.call(this, options);
+
+ if (options.marker !== undefined) {
+ if (options.marker instanceof GoogleMapsApiMarker) {
+ this.setMarker(options.marker);
+ } else {
+ throw new Error("Invalid argument: " + options.marker);
+ }
+ }
+ this.setGoogleInfoWindow(new google.maps.InfoWindow({
+ position: this.getMap().fromPointToLatLng(options.position),
+ id: options.id
+ }));
+}
+
+GoogleMapsApiInfoWindow.prototype = Object.create(InfoWindow.prototype);
+GoogleMapsApiInfoWindow.prototype.constructor = GoogleMapsApiInfoWindow;
+
+GoogleMapsApiInfoWindow.prototype.open = function () {
+ var googleMarker = this.getGoogleInfoWindow();
+ if (googleMarker.getMap() !== undefined && googleMarker.getMap() !== null) {
+ logger.warn("InfoWindow is already opened");
+ }
+ else {
+ googleMarker.open(this.getMap().getGoogleMap(), this._marker);
+ }
+};
+
+GoogleMapsApiInfoWindow.prototype.hide = function () {
+ if (!this.isOpened()) {
+ logger.warn("InfoWindow is already invisible");
+ } else {
+ this.getGoogleInfoWindow().setMap(null);
+ }
+};
+GoogleMapsApiInfoWindow.prototype.isOpened = function () {
+ var googleMarker = this.getGoogleInfoWindow();
+ return googleMarker.getMap() !== null && googleMarker.getMap() !== undefined;
+};
+
+/**
+ *
+ * @param {google.maps.InfoWindow} infoWindow
+ */
+GoogleMapsApiInfoWindow.prototype.setGoogleInfoWindow = function (infoWindow) {
+ this._infoWindow = infoWindow;
+};
+
+GoogleMapsApiInfoWindow.prototype.getGoogleInfoWindow = function () {
+ return this._infoWindow;
+};
+
+/**
+ *
+ * @param {string|HTMLElement} content
+ */
+GoogleMapsApiInfoWindow.prototype.setContent = function (content) {
+ this.getGoogleInfoWindow().setContent(content);
+};
+
+/**
+ *
+ * @param {GoogleMapsApiMarker} marker
+ */
+GoogleMapsApiInfoWindow.prototype.setMarker = function (marker) {
+ this._marker = marker.getGoogleMarker();
+};
+
+
+module.exports = GoogleMapsApiInfoWindow;
diff --git a/frontend-js/src/main/js/map/canvas/GoogleMaps/GoogleMapsApiMarker.js b/frontend-js/src/main/js/map/canvas/GoogleMaps/GoogleMapsApiMarker.js
new file mode 100644
index 0000000000000000000000000000000000000000..15ee96ce6c3a61aea637def98efeae6b5411f950
--- /dev/null
+++ b/frontend-js/src/main/js/map/canvas/GoogleMaps/GoogleMapsApiMarker.js
@@ -0,0 +1,105 @@
+"use strict";
+
+var Bounds = require('../Bounds');
+var Marker = require('../Marker');
+var Promise = require('bluebird');
+
+// noinspection JSUnusedLocalSymbols
+var logger = require('../../../logger');
+
+/**
+ *
+ * @param {Point} options.position
+ * @param {string} options.icon
+ * @param {string} options.id
+ * @param {GoogleMapsApiCanvas} options.map
+
+ * @constructor
+ * @extends {Marker}
+ */
+
+function GoogleMapsApiMarker(options) {
+ Marker.call(this, options);
+
+ var self = this;
+
+ self.setGoogleMarker(new google.maps.Marker({
+ position: this.getMap().fromPointToLatLng(options.position),
+ icon: options.icon,
+ id: options.id
+ }));
+
+ google.maps.event.addListener(self.getGoogleMarker(), "click", function () {
+ return self.callListeners("click");
+ });
+
+}
+
+GoogleMapsApiMarker.prototype = Object.create(Marker.prototype);
+GoogleMapsApiMarker.prototype.constructor = GoogleMapsApiMarker;
+
+/**
+ *
+ * @param {google.maps.Marker} marker
+ */
+GoogleMapsApiMarker.prototype.setGoogleMarker = function (marker) {
+ this._marker = marker;
+};
+
+/**
+ *
+ * @returns {google.maps.Marker}
+ */
+GoogleMapsApiMarker.prototype.getGoogleMarker = function () {
+ return this._marker;
+};
+
+/**
+ *
+ * @returns {Promise}
+ */
+GoogleMapsApiMarker.prototype.show = function () {
+ var googleMarker = this.getGoogleMarker();
+ if (googleMarker.getMap() !== undefined && googleMarker.getMap() !== null) {
+ logger.warn("Marker is already shown");
+ } else {
+ googleMarker.setMap(this.getMap().getGoogleMap());
+ }
+ return Promise.resolve();
+};
+
+GoogleMapsApiMarker.prototype.hide = function () {
+ if (!this.isShown()) {
+ logger.warn("Marker is already invisible");
+ } else {
+ this.getGoogleMarker().setMap(null);
+ }
+};
+
+/**
+ *
+ * @returns {boolean}
+ */
+GoogleMapsApiMarker.prototype.isShown = function () {
+ var googleMarker = this.getGoogleMarker();
+ return googleMarker.getMap() !== null && googleMarker.getMap() !== undefined;
+};
+
+/**
+ *
+ * @returns {Bounds}
+ */
+GoogleMapsApiMarker.prototype.getBounds = function () {
+ return new Bounds(this.getMap().fromLatLngToPoint(this.getGoogleMarker().position));
+};
+
+/**
+ *
+ * @param {string} icon
+ */
+GoogleMapsApiMarker.prototype.setIcon = function (icon) {
+ this.getGoogleMarker().setIcon(icon);
+};
+
+
+module.exports = GoogleMapsApiMarker;
diff --git a/frontend-js/src/main/js/map/canvas/GoogleMaps/GoogleMapsApiPolyline.js b/frontend-js/src/main/js/map/canvas/GoogleMaps/GoogleMapsApiPolyline.js
new file mode 100644
index 0000000000000000000000000000000000000000..dcf4ca9a7ad41e3063b0c769242ae9db03ba8452
--- /dev/null
+++ b/frontend-js/src/main/js/map/canvas/GoogleMaps/GoogleMapsApiPolyline.js
@@ -0,0 +1,106 @@
+"use strict";
+
+var Polyline = require('../Polyline');
+var Bounds = require('../Bounds');
+
+// noinspection JSUnusedLocalSymbols
+var logger = require('../../../logger');
+
+/**
+ * @param {MapCanvas} options.map
+ * @param {Point[]} options.path
+ * @param {string} options.strokeColor
+ * @param {number} options.strokeWeight
+ * @param {number} options.strokeOpacity
+ *
+ * @constructor
+ * @augments {Polyline}
+ */
+function GoogleMapsApiPolyline(options) {
+ Polyline.call(this, options);
+
+ var path = [];
+ for (var i = 0; i < options.path.length; i++) {
+ path.push(this.getMap().fromPointToLatLng(options.path[i]));
+ }
+
+ this.setGooglePolyline(new google.maps.Polyline({
+ strokeColor: options.strokeColor,
+ strokeOpacity: options.strokeOpacity,
+ strokeWeight: options.strokeWeight,
+ path: path
+ }));
+ google.maps.event.addListener(this.getGooglePolyline(), "click", function(){
+ return self.callListeners("click");
+ });
+}
+
+GoogleMapsApiPolyline.prototype = Object.create(Polyline.prototype);
+GoogleMapsApiPolyline.prototype.constructor = GoogleMapsApiPolyline;
+
+/**
+ *
+ * @param {google.maps.Polyline} polyline
+ */
+GoogleMapsApiPolyline.prototype.setGooglePolyline = function (polyline) {
+ this._polyline = polyline;
+};
+
+/**
+ *
+ * @returns {google.maps.Polyline}
+ */
+GoogleMapsApiPolyline.prototype.getGooglePolyline = function () {
+ return this._polyline;
+};
+
+GoogleMapsApiPolyline.prototype.show = function () {
+ var googlePolyline = this.getGooglePolyline();
+ if (googlePolyline.getMap() !== undefined && googlePolyline.getMap() !== null) {
+ logger.warn("Polyline is already shown");
+ }
+ else {
+ googlePolyline.setMap(this.getMap().getGoogleMap());
+ }
+};
+
+GoogleMapsApiPolyline.prototype.hide = function () {
+ if (!this.isShown()) {
+ logger.warn("Polyline is already invisible");
+ } else {
+ this.getGooglePolyline().setMap(null);
+ }
+};
+
+/**
+ *
+ * @returns {boolean}
+ */
+GoogleMapsApiPolyline.prototype.isShown = function () {
+ var googlePolyline = this.getGooglePolyline();
+ return googlePolyline.getMap() !== null && googlePolyline.getMap() !== undefined;
+};
+
+/**
+ *
+ * @returns {Bounds}
+ */
+GoogleMapsApiPolyline.prototype.getBounds = function () {
+ var result = new Bounds();
+ for (var i = 0; i < this.getGooglePolyline().getPath().getLength(); i++) {
+ var latLng = this.getGooglePolyline().getPath().getAt(i);
+ var point = this.getMap().fromLatLngToPoint(latLng);
+ result.extend(point);
+ }
+ return result;
+};
+
+/**
+ *
+ * @param {Object} options
+ */
+GoogleMapsApiPolyline.prototype.setOptions = function (options) {
+ this.getGooglePolyline().setOptions(options);
+};
+
+module.exports = GoogleMapsApiPolyline;
diff --git a/frontend-js/src/main/js/map/canvas/GoogleMaps/GoogleMapsApiRectangle.js b/frontend-js/src/main/js/map/canvas/GoogleMaps/GoogleMapsApiRectangle.js
new file mode 100644
index 0000000000000000000000000000000000000000..ba6b277e1e65025ff55d03b89973076a4f20a004
--- /dev/null
+++ b/frontend-js/src/main/js/map/canvas/GoogleMaps/GoogleMapsApiRectangle.js
@@ -0,0 +1,123 @@
+"use strict";
+
+var Rectangle = require('../Rectangle');
+var Bounds = require('../Bounds');
+
+// noinspection JSUnusedLocalSymbols
+var logger = require('../../../logger');
+
+/**
+ *
+ * @param {MapCanvas} options.map
+ * @param {Bounds} options.bounds
+ * @param {MapCanvas} options.fillOpacity
+ * @param {number} options.id
+ * @param {number} options.strokeWeight
+ * @param {string} options.fillColor
+ * @param {string} options.strokeColor
+ * @param {number} options.strokeOpacity
+ *
+ * @constructor
+ * @extends Rectangle
+ */
+function GoogleMapsApiRectangle(options) {
+ Rectangle.call(this, options);
+
+ var bounds = new google.maps.LatLngBounds();
+ bounds.extend(this.getMap().fromPointToLatLng(options.bounds.getTopLeft()));
+ bounds.extend(this.getMap().fromPointToLatLng(options.bounds.getRightBottom()));
+
+ this.setGoogleRectangle(new google.maps.Rectangle({
+ bounds: bounds,
+ fillOpacity: options.fillOpacity,
+ id: options.id,
+ strokeWeight: options.strokeWeight,
+ fillColor: options.fillColor,
+ strokeColor: options.strokeColor,
+ strokeOpacity: options.strokeOpacity
+ }));
+
+ google.maps.event.addListener(this.getGoogleRectangle(), "click", function(){
+ return self.callListeners("click");
+ });
+}
+
+GoogleMapsApiRectangle.prototype = Object.create(Rectangle.prototype);
+GoogleMapsApiRectangle.prototype.constructor = GoogleMapsApiRectangle;
+
+/**
+ *
+ * @param {google.maps.Rectangle} rectangle
+ */
+GoogleMapsApiRectangle.prototype.setGoogleRectangle = function (rectangle) {
+ this._rectangle = rectangle;
+};
+
+/**
+ *
+ * @returns {google.maps.Rectangle}
+ */
+GoogleMapsApiRectangle.prototype.getGoogleRectangle = function () {
+ return this._rectangle;
+};
+
+GoogleMapsApiRectangle.prototype.show = function () {
+ var googleRectangle = this.getGoogleRectangle();
+ if (googleRectangle.getMap() !== undefined && googleRectangle.getMap() !== null) {
+ logger.warn("Rectangle is already shown");
+ }
+ else {
+ googleRectangle.setMap(this.getMap().getGoogleMap());
+ }
+};
+
+GoogleMapsApiRectangle.prototype.hide = function () {
+ if (!this.isShown()) {
+ logger.warn("Rectangle is already invisible");
+ } else {
+ this.getGoogleRectangle().setMap(null);
+ }
+};
+
+/**
+ *
+ * @returns {boolean}
+ */
+GoogleMapsApiRectangle.prototype.isShown = function () {
+ var googleRectangle = this.getGoogleRectangle();
+ return googleRectangle.getMap() !== null && googleRectangle.getMap() !== undefined;
+};
+
+/**
+ *
+ * @param bounds {Bounds}
+ */
+GoogleMapsApiRectangle.prototype.setBounds = function (bounds) {
+ var latLngBounds = new google.maps.LatLngBounds();
+ latLngBounds.extend(this.getMap().fromPointToLatLng(bounds.getTopLeft()));
+ latLngBounds.extend(this.getMap().fromPointToLatLng(bounds.getRightBottom()));
+ this.getGoogleRectangle().setBounds(latLngBounds);
+};
+
+/**
+ *
+ * @returns {Bounds}
+ */
+GoogleMapsApiRectangle.prototype.getBounds = function () {
+ var latLngBounds = this.getGoogleRectangle().getBounds();
+ var result = new Bounds();
+ result.extend(this.getMap().fromLatLngToPoint(latLngBounds.getSouthWest()));
+ result.extend(this.getMap().fromLatLngToPoint(latLngBounds.getNorthEast()));
+ return result;
+};
+
+/**
+ *
+ * @param {Object} options
+ */
+GoogleMapsApiRectangle.prototype.setOptions = function (options) {
+ this.getGoogleRectangle().setOptions(options);
+};
+
+
+module.exports = GoogleMapsApiRectangle;
diff --git a/frontend-js/src/main/js/map/canvas/InfoWindow.js b/frontend-js/src/main/js/map/canvas/InfoWindow.js
new file mode 100644
index 0000000000000000000000000000000000000000..03061229ddb5d6a9808cf5be2404a646b46f10e2
--- /dev/null
+++ b/frontend-js/src/main/js/map/canvas/InfoWindow.js
@@ -0,0 +1,64 @@
+"use strict";
+
+var MapCanvas = require('./MapCanvas');
+var Marker = require('./Marker');
+
+// noinspection JSUnusedLocalSymbols
+var logger = require('../../logger');
+
+/**
+ *
+ * @param {MapCanvas} options.map
+ * @constructor
+ */
+function InfoWindow(options) {
+ this.setMap(options.map);
+}
+
+InfoWindow.prototype.open = function () {
+ throw new Error("Not implemented");
+};
+
+InfoWindow.prototype.hide = function () {
+ throw new Error("Not implemented");
+};
+
+/**
+ *
+ * @param {MapCanvas} map
+ */
+InfoWindow.prototype.setMap = function (map) {
+ if (!(map instanceof MapCanvas)) {
+ throw new Error("Map must be of MapCanvas class");
+ }
+ this._map = map;
+};
+
+/**
+ *
+ * @returns {MapCanvas}
+ */
+InfoWindow.prototype.getMap = function () {
+ return this._map;
+};
+
+// noinspection JSUnusedLocalSymbols
+/**
+ *
+ * @param {Marker} marker
+ */
+InfoWindow.prototype.setMarker = function (marker) {
+ throw new Error("Not implemented");
+};
+
+// noinspection JSUnusedLocalSymbols
+/**
+ *
+ * @param {HTMLElement|string} content
+ */
+InfoWindow.prototype.setContent = function (content) {
+ throw new Error("Not implemented");
+};
+
+
+module.exports = InfoWindow;
diff --git a/frontend-js/src/main/js/map/canvas/MapCanvas.js b/frontend-js/src/main/js/map/canvas/MapCanvas.js
new file mode 100644
index 0000000000000000000000000000000000000000..0e59cc6345d63fe83570c7ec93eedca6a8ef020c
--- /dev/null
+++ b/frontend-js/src/main/js/map/canvas/MapCanvas.js
@@ -0,0 +1,347 @@
+"use strict";
+
+// noinspection JSUnusedLocalSymbols
+var logger = require('../../logger');
+
+var Functions = require('../../Functions');
+var ObjectWithListeners = require('../../ObjectWithListeners');
+var Point = require('./Point');
+
+/**
+ *
+ * @param {HTMLElement} element
+ * @param {Object} options
+ * @param {number} options.tileSize
+ * @param {number} options.minZoom
+ * @param {number} options.height
+ * @param {number} options.width
+ * @constructor
+ * @extends ObjectWithListeners
+ */
+function MapCanvas(element, options) {
+ ObjectWithListeners.call(this);
+ //map canvas listeners
+ this.registerListenerType("click");
+ this.registerListenerType("rightclick");
+ this.registerListenerType("mouseup");
+ this.registerListenerType("dragstart");
+ this.registerListenerType("zoom_changed");
+ this.registerListenerType("center_changed");
+ this.registerListenerType("maptypeid_changed");
+
+ //shape listeners
+ this.registerListenerType("shape-rightclick");
+
+ this.setOptions(options);
+
+ // following fields are used in conversion between x,y coordinates and lat,lng
+ // coordinates
+ this.pixelOrigin_ = new Point(options.tileSize / 2, options.tileSize / 2);
+ this.pixelsPerLonDegree_ = options.tileSize / 360;
+ this.pixelsPerLonRadian_ = options.tileSize / (2 * Math.PI);
+ /* jshint bitwise: false */
+ this.zoomFactor = Math.max(options.width, options.height) / (options.tileSize / (1 << options.minZoom));
+
+}
+
+MapCanvas.prototype = Object.create(ObjectWithListeners.prototype);
+MapCanvas.prototype.constructor = ObjectWithListeners;
+
+/**
+ *
+ * @param {Object} options
+ * @param {number} options.tileSize
+ * @param {number} options.minZoom
+ * @param {number} options.height
+ * @param {number} options.width
+ */
+MapCanvas.prototype.setOptions = function (options) {
+ this._options = options;
+};
+
+/**
+ *
+ * @returns {{tileSize: number, minZoom: number, height: number, width: number}}
+ */
+MapCanvas.prototype.getOptions = function () {
+ return this._options;
+};
+/**
+ *
+ * @returns {number}
+ */
+MapCanvas.prototype.getTileSize = function () {
+ return this.getOptions().tileSize;
+};
+
+/**
+ *
+ * @returns {number}
+ */
+MapCanvas.prototype.getMaxZoom = function () {
+ return this.getOptions().maxZoom;
+};
+
+/**
+ *
+ * @returns {number}
+ */
+MapCanvas.prototype.getMinZoom = function () {
+ return this.getOptions().minZoom;
+};
+
+/**
+ *
+ * @returns {number}
+ */
+MapCanvas.prototype.getWidth = function () {
+ return this.getOptions().width;
+};
+
+/**
+ *
+ * @returns {number}
+ */
+MapCanvas.prototype.getHeight = function () {
+ return this.getOptions().height;
+};
+
+// noinspection JSUnusedLocalSymbols
+/**
+ *
+ * @param {Object} options
+ * @returns {Marker}
+ */
+MapCanvas.prototype.createMarker = function (options) {
+ throw new Error("Not implemented");
+};
+
+// noinspection JSUnusedLocalSymbols
+/**
+ *
+ * @param {Object} options
+ * @returns {InfoWindow}
+ */
+MapCanvas.prototype.createInfoWindow = function (options) {
+ throw new Error("Not implemented");
+};
+
+// noinspection JSUnusedLocalSymbols
+/**
+ *
+ * @param {Object} options
+ * @returns {Rectangle}
+ */
+MapCanvas.prototype.createRectangle = function (options) {
+ throw new Error("Not implemented");
+};
+
+// noinspection JSUnusedLocalSymbols
+/**
+ *
+ * @param {Object} options
+ * @returns {Polyline}
+ */
+MapCanvas.prototype.createPolyline = function (options) {
+ throw new Error("Not implemented");
+};
+
+// noinspection JSUnusedLocalSymbols
+/**
+ *
+ * @param {HTMLElement} element
+ */
+MapCanvas.prototype.addLeftBottomControl = function (element) {
+ throw new Error("Not implemented");
+};
+
+// noinspection JSUnusedLocalSymbols
+/**
+ *
+ * @param {HTMLElement} element
+ */
+MapCanvas.prototype.addRightBottomControl = function (element) {
+ throw new Error("Not implemented");
+};
+
+// noinspection JSUnusedLocalSymbols
+/**
+ *
+ * @param {Bounds} bounds
+ */
+MapCanvas.prototype.fitBounds = function (bounds) {
+ throw new Error("Not implemented");
+};
+
+// noinspection JSUnusedLocalSymbols
+/**
+ *
+ * @param {Point} center
+ */
+MapCanvas.prototype.setCenter = function (center) {
+ throw new Error("Not implemented");
+};
+
+/**
+ * @returns {Point}
+ */
+MapCanvas.prototype.getCenter = function () {
+ throw new Error("Not implemented");
+};
+
+/**
+ * @returns {number}
+ */
+MapCanvas.prototype.getZoom = function () {
+ throw new Error("Not implemented");
+};
+
+
+// noinspection JSUnusedLocalSymbols
+/**
+ *
+ * @param {number} zoom
+ */
+MapCanvas.prototype.setZoom = function (zoom) {
+ throw new Error("Not implemented");
+};
+
+/**
+ * @returns {string}
+ */
+MapCanvas.prototype.getBackgroundId = function () {
+ throw new Error("Not implemented");
+};
+
+// noinspection JSUnusedLocalSymbols
+/**
+ *
+ * @param {number|string} backgroundId
+ */
+MapCanvas.prototype.getBackgroundId = function (backgroundId) {
+ throw new Error("Not implemented");
+};
+
+/**
+ * @returns {Bounds}
+ */
+MapCanvas.prototype.getBounds = function () {
+ throw new Error("Not implemented");
+};
+
+/**
+ * It toggle drawing manager used on the map: if it's on then it will turn it
+ * off, if it's off it will turn it on
+ *
+ */
+MapCanvas.prototype.toggleDrawing = function () {
+ if (this.isDrawingOn()) {
+ this.turnOffDrawing();
+ } else {
+ this.turnOnDrawing();
+ }
+};
+
+/**
+ * Turns on drawing library.
+ */
+MapCanvas.prototype.turnOnDrawing = function () {
+ throw new Error("Not implemented");
+};
+
+/**
+ * Turns off drawing library.
+ */
+MapCanvas.prototype.turnOffDrawing = function () {
+ throw new Error("Not implemented");
+};
+/**
+ * @returns {boolean}
+ */
+MapCanvas.prototype.isDrawingOn = function () {
+ throw new Error("Not implemented");
+};
+
+// noinspection JSUnusedLocalSymbols
+/**
+ *
+ * @param {Object} area
+ */
+MapCanvas.prototype.setSelectedArea = function (area) {
+ throw new Error("Not implemented");
+};
+
+/**
+ *
+ * @returns {Object}
+ */
+MapCanvas.prototype.getSelectedArea = function () {
+ throw new Error("Not implemented");
+};
+
+MapCanvas.prototype.removeSelection = function () {
+ throw new Error("Not implemented");
+};
+
+// noinspection JSUnusedLocalSymbols
+/**
+ *
+ * @param {string} type
+ * @param [data]
+ */
+MapCanvas.prototype.triggerListeners = function (type, data) {
+ throw new Error("Not implemented");
+};
+
+/**
+ * Transforms coordinates on the map from {Point} to
+ * google.maps.LatLng
+ *
+ * @param {Point} point
+ * coordinates in standard x,y format
+ * @return {number[]} coordinates in lat,lng format
+ */
+MapCanvas.prototype.pointToLatLng = function (point) {
+ var me = this;
+
+ // rescale the point (all computations are done assuming that we work on
+ // TILE_SIZE square)
+ var p = new Point(point.x / me.zoomFactor, point.y / me.zoomFactor);
+ var origin = me.pixelOrigin_;
+ var lng = (p.x - origin.x) / me.pixelsPerLonDegree_;
+ var latRadians = (p.y - origin.y) / -me.pixelsPerLonRadian_;
+ var lat = Functions.radiansToDegrees(2 * Math.atan(Math.exp(latRadians)) - Math.PI / 2);
+ return [lat, lng];
+};
+
+/**
+ * Transforms coordinates on the map from google.maps.LatLng to
+ * {Point}
+ *
+ * @param {number[]} latLng
+ * in lat,lng format
+ * @returns {Point} coordinates in x,y format
+ *
+ */
+MapCanvas.prototype.latLngToPoint = function (latLng) {
+ var lat = latLng[0];
+ var lng = latLng[1];
+ var me = this;
+ var point = new Point(0, 0);
+ var origin = me.pixelOrigin_;
+
+ point.x = origin.x + lng * me.pixelsPerLonDegree_;
+
+ // Truncating to 0.9999 effectively limits latitude to 89.189. This is
+ // about a third of a tile past the edge of the world tile.
+ var siny = Functions.bound(Math.sin(Functions.degreesToRadians(lat)), -0.9999, 0.9999);
+ point.y = origin.y + 0.5 * Math.log((1 + siny) / (1 - siny)) * -me.pixelsPerLonRadian_;
+
+ // rescale the point (all computations are done assuming that we work on
+ // TILE_SIZE square)
+ point.x *= me.zoomFactor;
+ point.y *= me.zoomFactor;
+ return point;
+};
+
+module.exports = MapCanvas;
diff --git a/frontend-js/src/main/js/map/canvas/Marker.js b/frontend-js/src/main/js/map/canvas/Marker.js
new file mode 100644
index 0000000000000000000000000000000000000000..dac47734f1205f0c26ae156f935e173a0c4f34eb
--- /dev/null
+++ b/frontend-js/src/main/js/map/canvas/Marker.js
@@ -0,0 +1,74 @@
+"use strict";
+
+var MapCanvas = require('./MapCanvas');
+
+// noinspection JSUnusedLocalSymbols
+var logger = require('../../logger');
+
+var ObjectWithListeners = require('../../ObjectWithListeners');
+
+/**
+ *
+ * @param {MapCanvas} options.map
+ *
+ * @constructor
+ * @augments {ObjectWithListeners}
+ */
+function Marker(options) {
+ ObjectWithListeners.call(this);
+ this.registerListenerType("click");
+ this.setMap(options.map);
+}
+
+Marker.prototype = Object.create(ObjectWithListeners.prototype);
+Marker.prototype.constructor = ObjectWithListeners;
+
+/**
+ * @returns {Promise}
+ */
+Marker.prototype.show = function () {
+ throw new Error("Not implemented");
+};
+
+Marker.prototype.hide = function () {
+ throw new Error("Not implemented");
+};
+
+/**
+ * @returns {Bounds}
+ */
+Marker.prototype.getBounds = function () {
+ throw new Error("Not implemented");
+};
+
+// noinspection JSUnusedLocalSymbols
+/**
+ *
+ * @param {string} icon
+ */
+Marker.prototype.setIcon = function (icon) {
+ throw new Error("Not implemented");
+};
+
+/**
+ *
+ * @param {MapCanvas} map
+ */
+Marker.prototype.setMap = function (map) {
+ if (!(map instanceof MapCanvas)) {
+ throw new Error("Map must be of MapCanvas class");
+ }
+ this._map = map;
+};
+
+/**
+ *
+ * @returns {MapCanvas}
+ */
+Marker.prototype.getMap = function () {
+ return this._map;
+};
+
+
+
+module.exports = Marker;
diff --git a/frontend-js/src/main/js/map/canvas/OpenLayers/OpenLayerCanvas.js b/frontend-js/src/main/js/map/canvas/OpenLayers/OpenLayerCanvas.js
new file mode 100644
index 0000000000000000000000000000000000000000..1eb40e1a5a828c3dedd157b4cb9716b32cd7c371
--- /dev/null
+++ b/frontend-js/src/main/js/map/canvas/OpenLayers/OpenLayerCanvas.js
@@ -0,0 +1,565 @@
+"use strict";
+
+var ol;
+
+// noinspection JSUnusedLocalSymbols
+var logger = require('../../../logger');
+
+var Bounds = require('../Bounds');
+var Functions = require('../../../Functions');
+var MapCanvas = require('../MapCanvas');
+var OpenLayerMarker = require('./OpenLayerMarker');
+var OpenLayerPolyline = require('./OpenLayerPolyline');
+var OpenLayerRectangle = require('./OpenLayerRectangle');
+var OpenLayerInfoWindow = require('./OpenLayerInfoWindow');
+
+var Point = require('../Point');
+
+var Promise = require('bluebird');
+
+function OpenLayerCanvas(element, options) {
+ ol = require('openlayers/dist/ol-debug');
+
+ MapCanvas.call(this, element, options);
+ $(element).css("background-color", "#e4e2de");
+ var self = this;
+
+ self._markerLayer = new ol.layer.Vector({
+ source: new ol.source.Vector({
+ features: []
+ })
+ });
+
+ self._rectangleLayer = new ol.layer.Vector({
+ source: new ol.source.Vector({
+ features: []
+ })
+ });
+
+ self._polylineLayer = new ol.layer.Vector({
+ source: new ol.source.Vector({
+ features: []
+ })
+ });
+
+ self._drawingLayer = new ol.layer.Vector({
+ source: new ol.source.Vector({
+ features: []
+ }),
+ style: new ol.style.Style({
+ stroke: new ol.style.Stroke({
+ color: Functions.colorToRgbaString("#000000", 1.0),
+ width: 3.0
+ }),
+ fill: new ol.style.Fill({
+ color: Functions.colorToRgbaString("#000000", 0.5)
+ })
+ })
+ });
+
+ var layers = self.createLayers(options);
+ layers.push(self._rectangleLayer);
+ layers.push(self._markerLayer);
+ layers.push(self._polylineLayer);
+ layers.push(self._drawingLayer);
+
+ var map = new ol.Map({
+ controls: ol.control.defaults({
+ attributionOptions: {
+ collapsible: false
+ }
+ }),
+ target: element,
+ layers: layers,
+ view: new ol.View({
+ center: self.fromPointToProjection(options.center),
+ zoom: options.zoom,
+ minZoom: options.minZoom,
+ maxZoom: options.maxZoom
+ })
+ });
+ self.setOpenLayersMap(map);
+ self.addCenterButton();
+
+ map.on("click", function (e) {
+ var features = [];
+ map.forEachFeatureAtPixel(e.pixel, function (feature, layer) {
+ features.push(feature);
+ if (layer === self._markerLayer) {
+ return feature.__openLayerMarker.callListeners("click");
+ } else if (layer === self._rectangleLayer) {
+ return feature.__openLayerRectangle.callListeners("click");
+ } else if (layer === self._polylineLayer) {
+ return feature.__openLayerPolyline.callListeners("click");
+ } else if (layer === self._drawingLayer) {
+ self.setSelectedArea(feature);
+ var polygon = self.featureToString(feature);
+ return self.callListeners("shape-rightclick", {polygon: polygon});
+ } else if (layer !== null) {
+ throw new Error("Unknown layer");
+ }
+ });
+ if (features.length === 0) { //we clicked on something - not directly on the map
+ var point = self.fromProjectionToPoint(e.coordinate);
+ return self.callListeners("click", {point: point});
+ }
+ });
+
+ //rightclick
+ map.getViewport().addEventListener('contextmenu', function (evt) {
+ evt.preventDefault();
+
+ var featureClicked;
+ map.forEachFeatureAtPixel(map.getEventPixel(evt), function (feature, layer) {
+ if (layer === self._drawingLayer) {
+ featureClicked = feature;
+ }
+ });
+ if (featureClicked) {
+ self.setSelectedArea(featureClicked);
+ var polygon = self.featureToString(featureClicked);
+ return self.callListeners("shape-rightclick", {polygon: polygon});
+ } else {
+ var projectionPoint = map.getEventCoordinate(evt);
+ var point = self.fromProjectionToPoint(projectionPoint);
+ return self.callListeners("rightclick", {point: point});
+ }
+ });
+
+ var dragStarted = false;
+ $(element).on("mouseup", function () {
+ dragStarted = false;
+ //there is nothing in the api that allows for it
+ return self.callListeners("mouseup");
+ });
+ map.on("pointerdrag", function (evt) {
+ if (!dragStarted) {
+ dragStarted = true;
+ return self.callListeners("dragstart");
+ }
+ });
+
+ map.getView().on('change:resolution', function (e) {
+ var zoom = map.getView().getZoom();
+ if (zoom === Math.floor(zoom)) {
+ return self.callListeners("zoom_changed");
+ }
+ });
+ map.getView().on('change:center', function () {
+ return self.callListeners("center_changed");
+ });
+
+
+ // change mouse cursor when over marker
+ $(map.getViewport()).on('mousemove', function (e) {
+ var pixel = map.getEventPixel(e.originalEvent);
+ var hit = map.forEachFeatureAtPixel(pixel, function (feature, layer) {
+ return true;
+ });
+ if (hit) {
+ map.getTarget().style.cursor = 'pointer';
+ } else {
+ map.getTarget().style.cursor = '';
+ }
+ });
+
+}
+
+OpenLayerCanvas.prototype = Object.create(MapCanvas.prototype);
+OpenLayerCanvas.prototype.constructor = MapCanvas;
+
+OpenLayerCanvas.prototype.setOpenLayersMap = function (map) {
+ this._map = map;
+};
+
+OpenLayerCanvas.prototype.getOpenLayersMap = function () {
+ return this._map;
+};
+
+OpenLayerCanvas.prototype.createLayers = function (options) {
+ var self = this;
+ var result = [];
+ self._layers = [];
+ options.backgroundOverlays.forEach(function (overlay, index) {
+ var layer = new ol.layer.Tile({
+ visible: (index === 0),
+ source: new ol.source.XYZ({
+ minZoom: options.minZoom,
+ maxZoom: options.maxZoom,
+ wrapX: false,
+ tileLoadFunction: function (imageTile, src) {
+ if (src !== null) {
+ imageTile.getImage().src = src;
+ }
+ },
+ tileUrlFunction: function (coordinate) {
+
+ var zoom = coordinate[0];
+ // we have 1 tile on self.getConfiguration().MIN_ZOOM and
+ // therefore must limit tails according to this
+ /* jshint bitwise: false */
+ var maxTileRange = 1 << (zoom - self.getMinZoom());
+ var maxTileXRange = maxTileRange;
+ var maxTileYRange = maxTileRange;
+
+ //transform the coordinates to something that was used in google maps
+ var x = coordinate[1];
+ var y = -coordinate[2] - 1;
+
+ var width = self.getWidth();
+ var height = self.getHeight();
+ if (width > height) {
+ maxTileYRange = height / width * maxTileRange;
+ } else if (width < height) {
+ maxTileXRange = width / height * maxTileRange;
+ }
+ if (y < 0 || y >= maxTileYRange || x < 0 || x >= maxTileXRange) {
+ return null;
+ }
+
+ return overlay.directory + "/" + zoom + "/" + x + "/" + y + ".PNG";
+ }
+ })
+ });
+ layer.on('change:visible', function () {
+ if (layer.getVisible()) {
+ return self.callListeners("maptypeid_changed");
+ }
+ });
+ self._layers[overlay.id] = layer;
+ result.push(layer);
+ });
+ return result;
+};
+
+/**
+ *
+ * @returns {OpenLayerMarker}
+ */
+OpenLayerCanvas.prototype.createMarker = function (options) {
+ if (!(options.position instanceof Point)) {
+ throw new Error("position must be of type Point");
+ }
+ options.map = this;
+ options.source = this._markerLayer.getSource();
+ return new OpenLayerMarker(options);
+};
+
+/**
+ *
+ * @param {Point} options.position
+ * @param {OpenLayerMarker} [options.marker]
+ * @param {string} options.id
+ *
+ * @returns {OpenLayerInfoWindow}
+ */
+OpenLayerCanvas.prototype.createInfoWindow = function (options) {
+ options.map = this;
+ return new OpenLayerInfoWindow(options);
+};
+
+/**
+ *
+ * @param options
+ * @returns {OpenLayersRectangle}
+ */
+OpenLayerCanvas.prototype.createRectangle = function (options) {
+ if (!(options.bounds instanceof Bounds)) {
+ throw new Error("position must be of type Bounds");
+ }
+ options.map = this;
+ options.source = this._rectangleLayer.getSource();
+ return new OpenLayerRectangle(options);
+};
+
+/**
+ *
+ * @param options
+ * @returns {OpenLayerPolyline}
+ */
+OpenLayerCanvas.prototype.createPolyline = function (options) {
+ options.map = this;
+ options.source = this._polylineLayer.getSource();
+ return new OpenLayerPolyline(options);
+};
+
+/**
+ *
+ * @param {HTMLElement} element
+ */
+OpenLayerCanvas.prototype.addLeftBottomControl = function (element) {
+ var wrapper = Functions.createElement({type: "div", className: "ol-control minerva-ol-bottom-left"});
+ wrapper.appendChild(element);
+ this.getOpenLayersMap().addControl(new ol.control.Control({element: wrapper}));
+};
+
+/**
+ *
+ * @param {HTMLElement} element
+ */
+OpenLayerCanvas.prototype.addRightBottomControl = function (element) {
+ var wrapper = Functions.createElement({type: "div", className: "ol-control minerva-ol-bottom-right"});
+ wrapper.appendChild(element);
+ this.getOpenLayersMap().addControl(new ol.control.Control({element: wrapper}));
+};
+
+/**
+ * Adds center button to the map.
+ */
+OpenLayerCanvas.prototype.addCenterButton = function () {
+ var self = this;
+ var wrapper = Functions.createElement({
+ type: "div",
+ className: "ol-control minerva-ol-top-right"
+ });
+ wrapper.appendChild(Functions.createElement({
+ type: "a",
+ content: "<i class='fa fa-crosshairs' style='font-size:24px;color:grey'></i> ",
+ title: "center map",
+ href: "#",
+ onclick: function () {
+ var bounds = new Bounds(new Point(0, 0), new Point(self.getWidth(), self.getHeight()));
+ return self.fitBounds(bounds);
+ },
+ xss: false
+ }));
+ this.getOpenLayersMap().addControl(new ol.control.Control({element: wrapper}));
+};
+
+
+OpenLayerCanvas.prototype.fitBounds = function (bounds) {
+ var self = this;
+ var projectionBounds = [self.fromPointToProjection(bounds.getRightBottom()), self.fromPointToProjection(bounds.getTopLeft())];
+ var extent = ol.extent.boundingExtent(projectionBounds);
+ return self.getOpenLayersMap().getView().fit(extent);
+};
+
+OpenLayerCanvas.prototype.setCenter = function (center) {
+ this.getOpenLayersMap().getView().setCenter(this.fromPointToProjection(center));
+};
+
+/**
+ * @returns {Point}
+ */
+OpenLayerCanvas.prototype.getCenter = function () {
+ return this.fromProjectionToPoint(this.getOpenLayersMap().getView().getCenter());
+};
+
+/**
+ * @returns {number}
+ */
+OpenLayerCanvas.prototype.getZoom = function () {
+ return Math.floor(this.getOpenLayersMap().getView().getZoom());
+};
+/**
+ *
+ * @param {number} zoom
+ */
+OpenLayerCanvas.prototype.setZoom = function (zoom) {
+ var self = this;
+ if (self.getZoom() !== zoom) {
+ self.getOpenLayersMap().getView().setZoom(zoom);
+ return self.callListeners("zoom_changed")
+ }
+};
+
+/**
+ * @returns {string}
+ */
+OpenLayerCanvas.prototype.getBackgroundId = function () {
+ var layers = this._layers;
+ for (var id in layers) {
+ if (layers.hasOwnProperty(id)) {
+ var layer = layers[id];
+ if (layer.getVisible()) {
+ return id;
+ }
+ }
+ }
+ return null;
+};
+
+/**
+ *
+ * @param {number|string} backgroundId
+ */
+OpenLayerCanvas.prototype.setBackgroundId = function (backgroundId) {
+ backgroundId = parseInt(backgroundId);
+ var layers = this._layers;
+ var id, layer;
+ //first hide
+ for (id in layers) {
+ if (layers.hasOwnProperty(id)) {
+ layer = layers[id];
+ if (parseInt(id) !== backgroundId) {
+ layer.setVisible(false);
+ }
+ }
+ }
+ //then show, so there will always be at most one map visible
+ for (id in layers) {
+ if (layers.hasOwnProperty(id)) {
+ layer = layers[id];
+ if (parseInt(id) === backgroundId) {
+ layer.setVisible(true);
+ }
+ }
+ }
+};
+
+/**
+ * @returns {Bounds}
+ */
+OpenLayerCanvas.prototype.getBounds = function () {
+ var self = this;
+
+ var map = self.getOpenLayersMap();
+ var extent = map.getView().calculateExtent(map.getSize());
+
+ var projection1 = [extent[0], extent[1]];
+ var p1 = self.fromProjectionToPoint(projection1);
+ var projection2 = [extent[2], extent[3]];
+ var p2 = self.fromProjectionToPoint(projection2);
+ var maxWidth = 360 * self.pixelsPerLonDegree_ * self.zoomFactor;
+ if (p1.x > maxWidth / 2) {
+ p1.x -= maxWidth;
+ }
+ return new Bounds(p1, p2);
+};
+
+OpenLayerCanvas.prototype.turnOnDrawing = function () {
+ var self = this;
+ if (self.isDrawingOn()) {
+ logger.warn("Trying to turn on drawing manager, but it is already available.");
+ return;
+ }
+ self._draw = new ol.interaction.Draw({
+ source: this._drawingLayer.getSource(),
+ type: "Polygon",
+ style: new ol.style.Style({
+ stroke: new ol.style.Stroke({
+ color: Functions.colorToRgbaString("#000000", 1.0),
+ width: 3.0
+ }),
+ fill: new ol.style.Fill({
+ color: Functions.colorToRgbaString("#000000", 0.5)
+ })
+ })
+ });
+
+ self.getOpenLayersMap().addInteraction(self._draw);
+
+ self._draw.on("drawend", function () {
+ self.turnOffDrawing();
+ });
+};
+OpenLayerCanvas.prototype.turnOffDrawing = function () {
+ if (!this.isDrawingOn()) {
+ logger.warn("Trying to turn off drawing manager, but it is not there.");
+ return;
+ }
+ this.getOpenLayersMap().removeInteraction(this._draw);
+ this._draw = undefined;
+};
+/**
+ * @returns {boolean}
+ */
+OpenLayerCanvas.prototype.isDrawingOn = function () {
+ return this._draw !== undefined;
+};
+
+OpenLayerCanvas.prototype.setSelectedArea = function (area) {
+ this._selectedArea = area;
+};
+
+OpenLayerCanvas.prototype.getSelectedArea = function () {
+ return this._selectedArea;
+};
+
+OpenLayerCanvas.prototype.removeSelection = function () {
+ this._drawingLayer.getSource().removeFeature(this._selectedArea);
+ this._selectedArea = undefined;
+};
+
+OpenLayerCanvas.prototype.triggerListeners = function (type, data) {
+ var self = this;
+ if (type === "resize") {
+ return Promise.delay(200).then(function () {
+ return self.getOpenLayersMap().updateSize();
+ });
+ } else if (type === "maptypeid_changed") {
+ return self.callListeners("maptypeid_changed");
+ } else if (type === "projection_changed") {
+ // We ignore projection change event trigger.
+ } else {
+ throw new Error("Not implemented trigger listener: " + type);
+ }
+};
+
+OpenLayerCanvas.prototype.fromPointToProjection = function (point) {
+ var latLng = this.pointToLatLng(point);
+ return ol.proj.fromLonLat([latLng[1], latLng[0]]);
+};
+
+/**
+ *
+ * @param {number[]|null} projection
+ * @returns {Point|null}
+ */
+OpenLayerCanvas.prototype.fromProjectionToPoint = function (projection) {
+ if (projection === null) {
+ return null;
+ }
+ var lngLat = ol.proj.toLonLat(projection);
+ return this.latLngToPoint([lngLat[1], lngLat[0]]);
+};
+
+/**
+ * @param {string} type
+ * @param {Object} [data]
+ */
+OpenLayerCanvas.prototype.triggerEvent = function (type, data) {
+ var self = this;
+ var mev = data;
+ var map = self.getOpenLayersMap();
+ if (type === "click") {
+ var projection = undefined;
+ if (data.point !== undefined) {
+ projection = self.fromPointToProjection(data.point);
+ }
+
+ mev = {
+ dragging: false,
+ coordinate: projection,
+ map: map,
+ pixel: map.getPixelFromCoordinate(projection),
+ target: map,
+ type: type
+ };
+ return map.dispatchEvent(mev);
+ } else if (type === "rightclick") {
+ var clickEvent = new window.Event("contextmenu");
+ return map.getViewport().dispatchEvent(clickEvent);
+ } else if (type === "center_changed") {
+ return self.callListeners("center_changed");
+ } else {
+ throw new Error("Don't know how to trigger: " + type);
+ }
+};
+
+/**
+ *
+ * @param {ol.Feature} feature
+ * @returns {string}
+ */
+OpenLayerCanvas.prototype.featureToString = function (feature) {
+ var result = "";
+ var coordinates = feature.getGeometry().getCoordinates()[0];
+ for (var i = 0; i < coordinates.length; i++) {
+ var point = this.fromProjectionToPoint(coordinates[i]);
+ result += point.x.toFixed(2) + "," + point.y.toFixed(2) + ";";
+ }
+ return result;
+};
+
+module.exports = OpenLayerCanvas;
diff --git a/frontend-js/src/main/js/map/canvas/OpenLayers/OpenLayerInfoWindow.js b/frontend-js/src/main/js/map/canvas/OpenLayers/OpenLayerInfoWindow.js
new file mode 100644
index 0000000000000000000000000000000000000000..0e1f6403c17b2dfcc521be85a1db155486ce4d27
--- /dev/null
+++ b/frontend-js/src/main/js/map/canvas/OpenLayers/OpenLayerInfoWindow.js
@@ -0,0 +1,185 @@
+"use strict";
+
+var InfoWindow = require('../InfoWindow');
+var OpenLayerMarker = require('./OpenLayerMarker');
+
+var logger = require('../../../logger');
+// noinspection JSUnusedLocalSymbols
+var Functions = require('../../../Functions');
+
+var Promise = require('bluebird');
+
+function modifyPopover() {
+ if ($.fn.popover.Constructor.prototype.reposition === undefined) {
+ $.fn.popover.Constructor.prototype.reposition = function () {
+ var $tip = this.tip();
+
+ var placement = typeof this.options.placement === 'function' ? this.options.placement.call(this, $tip[0], this.$element[0]) : this.options.placement;
+
+ var autoToken = /\s?auto?\s?/i;
+ var autoPlace = autoToken.test(placement);
+ if (autoPlace) placement = placement.replace(autoToken, '') || 'top';
+
+ var pos = this.getPosition();
+ var actualWidth = $tip[0].offsetWidth;
+ var actualHeight = $tip[0].offsetHeight;
+
+ if (autoPlace) {
+ var orgPlacement = placement;
+ var viewportDim = this.getPosition(this.$viewport);
+
+ placement = placement === 'bottom' && pos.bottom + actualHeight > viewportDim.bottom ? 'top' :
+ placement === 'top' && pos.top - actualHeight < viewportDim.top ? 'bottom' :
+ placement === 'right' && pos.right + actualWidth > viewportDim.width ? 'left' :
+ placement === 'left' && pos.left - actualWidth < viewportDim.left ? 'right' :
+ placement;
+
+ $tip
+ .removeClass(orgPlacement)
+ .addClass(placement)
+ }
+
+ var calculatedOffset = this.getCalculatedOffset(placement, pos, actualWidth, actualHeight);
+
+ this.applyPlacement(calculatedOffset, placement)
+ }
+ }
+}
+
+function OpenLayerInfoWindow(options) {
+ InfoWindow.call(this, options);
+
+ modifyPopover();
+
+
+ var self = this;
+
+ if (options.marker !== undefined) {
+ if (options.marker instanceof OpenLayerMarker) {
+ self.setMarker(options.marker);
+ } else {
+ throw new Error("Invalid argument: " + options.marker);
+ }
+ }
+ var element = Functions.createElement({type: "div", name: "popup-window"});
+
+ options.map.getOpenLayersMap().getTargetElement().appendChild(element);
+
+ var popup = new ol.Overlay({
+ element: element,
+ positioning: 'bottom-center'
+ });
+ options.map.getOpenLayersMap().addOverlay(popup);
+
+ self._position = options.position;
+ self._element = element;
+
+ self.setOpenLayerInfoWindow(popup);
+ self._visible = false;
+ self.setContent(options.content);
+
+ //the only way that I found how to keep track if the window is opened or noth
+ $(element).on('hidden.bs.popover', function () {
+ self._visible = false;
+ });
+ $(element).on('shown.bs.popover', function () {
+ self._visible = true;
+ });
+}
+
+OpenLayerInfoWindow.prototype = Object.create(InfoWindow.prototype);
+OpenLayerInfoWindow.prototype.constructor = OpenLayerInfoWindow;
+
+OpenLayerInfoWindow.prototype.updatePosition = function () {
+ var self = this;
+ var popup = self.getOpenLayerInfoWindow();
+ var feature = self.getMarker();
+ var position;
+ if (feature !== undefined && feature !== null) {
+ position = feature.getGeometry().getCoordinates();
+ popup.setOffset([0, -36]);
+ } else {
+ position = self.getMap().fromPointToProjection(self._position);
+ popup.setOffset([0, 0]);
+ }
+ popup.setPosition(position);
+
+ return Promise.delay(100).then(function () {
+ $(self._element).popover('reposition');
+ });
+};
+
+OpenLayerInfoWindow.prototype.open = function () {
+ var self = this;
+
+ var title = Functions.createElement({type: "div", content: " "});
+ title.appendChild(Functions.createElement({
+ type: "button", className: "close", onclick: function () {
+ return self.hide();
+ },
+ content: "×"
+ }));
+
+ $(self._element).popover({
+ 'placement': 'top',
+ 'title': title,
+ 'content': this._content,
+ 'html': true
+ });
+
+ self.updatePosition();
+ $(self._element).popover('show');
+ self._visible = true;
+};
+
+OpenLayerInfoWindow.prototype.hide = function () {
+ var self = this;
+ $(self._element).popover('hide');
+ self._visible = false;
+};
+
+OpenLayerInfoWindow.prototype.setOpenLayerInfoWindow = function (infoWindow) {
+ this._infoWindow = infoWindow;
+};
+
+OpenLayerInfoWindow.prototype.getOpenLayerInfoWindow = function () {
+ return this._infoWindow;
+};
+
+OpenLayerInfoWindow.prototype.setContent = function (content) {
+ var self = this;
+ if (self._content === undefined) {
+ self._content = Functions.createElement({type: "div"});
+ }
+ if (Functions.isDomElement(content)) {
+ Functions.removeChildren(self._content);
+ self._content.appendChild(content);
+ } else {
+ self._content.innerHTML = content;
+ }
+ self.updatePosition();
+
+};
+
+/**
+ *
+ * @param {OpenLayerMarker} marker
+ */
+OpenLayerInfoWindow.prototype.setMarker = function (marker) {
+ var self = this;
+ marker.addListener("onHide", function () {
+ return self.hide();
+ });
+ self._marker = marker.getOpenLayerMarker();
+};
+
+OpenLayerInfoWindow.prototype.getMarker = function () {
+ return this._marker;
+};
+
+OpenLayerInfoWindow.prototype.isOpened = function () {
+ return this._visible;
+};
+
+
+module.exports = OpenLayerInfoWindow;
diff --git a/frontend-js/src/main/js/map/canvas/OpenLayers/OpenLayerMarker.js b/frontend-js/src/main/js/map/canvas/OpenLayers/OpenLayerMarker.js
new file mode 100644
index 0000000000000000000000000000000000000000..4a11d86c92d43fbc94b2b952f132ab8166466342
--- /dev/null
+++ b/frontend-js/src/main/js/map/canvas/OpenLayers/OpenLayerMarker.js
@@ -0,0 +1,91 @@
+"use strict";
+
+var Bounds = require('../Bounds');
+var Marker = require('../Marker');
+
+// noinspection JSUnusedLocalSymbols
+var logger = require('../../../logger');
+
+/**
+ *
+ * @constructor
+ * @augments {Marker}
+ */
+function OpenLayerMarker(options) {
+ Marker.call(this, options);
+ var self = this;
+ self.registerListenerType("onHide");
+
+ var iconFeature = new ol.Feature({
+ geometry: new ol.geom.Point(options.map.fromPointToProjection(options.position))
+ });
+
+ self.setOpenLayerMarker(iconFeature);
+ self.setIcon(options.icon);
+
+ options.source.addFeature(iconFeature);
+
+ self._icon = options.icon;
+
+ iconFeature.__openLayerMarker = self;
+}
+
+OpenLayerMarker.prototype = Object.create(Marker.prototype);
+OpenLayerMarker.prototype.constructor = OpenLayerMarker;
+
+OpenLayerMarker.prototype.setOpenLayerMarker = function (marker) {
+ this._marker = marker;
+};
+
+OpenLayerMarker.prototype.getOpenLayerMarker = function () {
+ return this._marker;
+};
+
+OpenLayerMarker.prototype.show = function () {
+ return this.setIcon(this._icon);
+};
+
+/**
+ *
+ * @returns {Promise|PromiseLike} that resolves after all listeners are resolved
+ */
+OpenLayerMarker.prototype.hide = function () {
+ this.getOpenLayerMarker().setStyle(new ol.style.Style({}));
+ return this.callListeners("onHide");
+};
+
+/**
+ *
+ * @returns {boolean}
+ */
+OpenLayerMarker.prototype.isShown = function () {
+ var feature = this.getOpenLayerMarker();
+ return feature.getStyle().getImage() !== null;
+};
+
+/**
+ *
+ * @returns {Bounds}
+ */
+OpenLayerMarker.prototype.getBounds = function () {
+ return new Bounds(this.getMap().fromProjectionToPoint(this.getOpenLayerMarker().getGeometry().getCoordinates()));
+};
+
+/**
+ *
+ * @param {string} icon
+ */
+OpenLayerMarker.prototype.setIcon = function (icon) {
+ this._icon = icon;
+ this.getOpenLayerMarker().setStyle(new ol.style.Style({
+ image: new ol.style.Icon({
+ src: icon,
+ anchor: [0.5, 1],
+ anchorXUnits: 'fraction',
+ anchorYUnits: 'fraction'
+ })
+ }
+ ));
+};
+
+module.exports = OpenLayerMarker;
diff --git a/frontend-js/src/main/js/map/canvas/OpenLayers/OpenLayerPolyline.js b/frontend-js/src/main/js/map/canvas/OpenLayers/OpenLayerPolyline.js
new file mode 100644
index 0000000000000000000000000000000000000000..e87a516537fcec87d8c331c54d834e7413f6ac08
--- /dev/null
+++ b/frontend-js/src/main/js/map/canvas/OpenLayers/OpenLayerPolyline.js
@@ -0,0 +1,110 @@
+"use strict";
+
+var Polyline = require('../Polyline');
+var Bounds = require('../Bounds');
+
+// noinspection JSUnusedLocalSymbols
+var logger = require('../../../logger');
+var Functions = require('../../../Functions');
+
+function OpenLayerPolyline(options) {
+ Polyline.call(this, options);
+
+ var self = this;
+
+ if (options.strokeColor === undefined) {
+ options.strokeColor = "#000000";
+ }
+ if (options.strokeWeight === undefined) {
+ options.strokeWeight = 1;
+ }
+ this._options = options;
+
+ var style = self.createStyle(options);
+
+ var line = this.createLine(options.path);
+
+ var feature = new ol.Feature({
+ geometry: line,
+ id: options.id
+ });
+
+ this.setOpenLayersPolyline(feature);
+ feature.setStyle(new ol.style.Style({}));
+ options.source.addFeature(feature);
+
+ feature.__openLayerPolyline = this;
+
+ this._style = style;
+}
+
+OpenLayerPolyline.prototype = Object.create(Polyline.prototype);
+OpenLayerPolyline.prototype.constructor = OpenLayerPolyline;
+
+OpenLayerPolyline.prototype.createStyle = function (options) {
+ return new ol.style.Style({
+ stroke: new ol.style.Stroke({
+ color: Functions.colorToRgbaString(options.strokeColor, options.strokeOpacity),
+ width: options.strokeWeight
+ })
+ });
+};
+
+OpenLayerPolyline.prototype.createLine = function (points) {
+ var self = this;
+
+ var result = [];
+ for (var i = 0; i < points.length; i++) {
+ result.push(self.getMap().fromPointToProjection(points[i]));
+ }
+
+ return new ol.geom.Polygon([result]);
+};
+
+OpenLayerPolyline.prototype.setOpenLayersPolyline = function (polyline) {
+ this._polyline = polyline;
+};
+
+OpenLayerPolyline.prototype.getOpenLayersPolyline = function () {
+ return this._polyline;
+};
+
+OpenLayerPolyline.prototype.show = function () {
+ return this.getOpenLayersPolyline().setStyle(this._style);
+};
+
+OpenLayerPolyline.prototype.hide = function () {
+ return this.getOpenLayersPolyline().setStyle(new ol.style.Style({}));
+};
+
+OpenLayerPolyline.prototype.isShown = function () {
+ return this.getOpenLayersPolyline().getStyle().getStroke() !== null;
+};
+
+OpenLayerPolyline.prototype.getBounds = function () {
+ var self = this;
+ var extent = self.getOpenLayersRectangle().getGeometry().getExtent();
+
+ var projection1 = [extent[0], extent[1]];
+ var p1 = self.getMap().fromProjectionToPoint(projection1);
+ var projection2 = [extent[2], extent[3]];
+ var p2 = self.getMap().fromProjectionToPoint(projection2);
+ return new Bounds(p1, p2);
+};
+
+/**
+ *
+ * @param options
+ */
+OpenLayerPolyline.prototype.setOptions = function (options) {
+ var self = this;
+ self._options = Object.assign(self._options, options);
+ var style = self.createStyle(self._options);
+ if (self.isShown()) {
+ self.getOpenLayersPolyline().setStyle(style);
+ }
+ self._style = style;
+};
+
+
+module.exports = OpenLayerPolyline;
diff --git a/frontend-js/src/main/js/map/canvas/OpenLayers/OpenLayerRectangle.js b/frontend-js/src/main/js/map/canvas/OpenLayers/OpenLayerRectangle.js
new file mode 100644
index 0000000000000000000000000000000000000000..eb0b859ee61e9a8156d3eea4eb6e9f2028ae3841
--- /dev/null
+++ b/frontend-js/src/main/js/map/canvas/OpenLayers/OpenLayerRectangle.js
@@ -0,0 +1,133 @@
+"use strict";
+
+var Rectangle = require('../Rectangle');
+var Bounds = require('../Bounds');
+var Point = require('../Point');
+
+// noinspection JSUnusedLocalSymbols
+var logger = require('../../../logger');
+
+var Functions = require('../../../Functions');
+
+/**
+ *
+ * @param options
+ * @constructor
+ * @extends Rectangle
+ */
+function OpenLayersRectangle(options) {
+ Rectangle.call(this, options);
+
+ var self = this;
+
+ if (options.strokeColor === undefined) {
+ options.strokeColor = "#000000";
+ }
+ if (options.strokeWeight === undefined) {
+ options.strokeWeight = 1;
+ }
+ this._options = options;
+
+ var style = self.createStyle(options);
+
+ var polygon = this.createPolygon(options.bounds);
+
+ var feature = new ol.Feature({
+ geometry: polygon,
+ id: options.id
+ });
+
+ this.setOpenLayersRectangle(feature);
+ feature.setStyle(new ol.style.Style({}));
+ options.source.addFeature(feature);
+
+ feature.__openLayerRectangle = this;
+
+ this._style = style;
+
+}
+
+OpenLayersRectangle.prototype = Object.create(Rectangle.prototype);
+OpenLayersRectangle.prototype.constructor = OpenLayersRectangle;
+
+OpenLayersRectangle.prototype.createPolygon = function (bounds) {
+ var self = this;
+
+ var p1 = bounds.getTopLeft();
+ var p3 = bounds.getRightBottom();
+ var p2 = new Point(p3.x, p1.y);
+ var p4 = new Point(p1.x, p3.y);
+
+ var points = [
+ self.getMap().fromPointToProjection(p1),
+ self.getMap().fromPointToProjection(p2),
+ self.getMap().fromPointToProjection(p3),
+ self.getMap().fromPointToProjection(p4)
+ ];
+
+ return new ol.geom.Polygon([points]);
+};
+
+OpenLayersRectangle.prototype.createStyle = function (options) {
+ return new ol.style.Style({
+ stroke: new ol.style.Stroke({
+ color: Functions.colorToRgbaString(options.strokeColor, options.strokeOpacity),
+ width: options.strokeWeight
+ }),
+ fill: new ol.style.Fill({
+ color: Functions.colorToRgbaString(options.fillColor, options.fillOpacity)
+ })
+ });
+};
+
+
+OpenLayersRectangle.prototype.setOpenLayersRectangle = function (rectangle) {
+ this._rectangle = rectangle;
+};
+
+OpenLayersRectangle.prototype.getOpenLayersRectangle = function () {
+ return this._rectangle;
+};
+
+OpenLayersRectangle.prototype.show = function () {
+ return this.getOpenLayersRectangle().setStyle(this._style);
+};
+
+OpenLayersRectangle.prototype.hide = function () {
+ return this.getOpenLayersRectangle().setStyle(new ol.style.Style({}));
+};
+OpenLayersRectangle.prototype.isShown = function () {
+ return this.getOpenLayersRectangle().getStyle().getFill() !== null;
+};
+
+/**
+ *
+ * @param bounds {Bounds}
+ */
+OpenLayersRectangle.prototype.setBounds = function (bounds) {
+ this._options.bounds = bounds;
+ this.getOpenLayersRectangle().setGeometry(this.createPolygon(bounds));
+};
+
+OpenLayersRectangle.prototype.getBounds = function () {
+ var self = this;
+ var extent = self.getOpenLayersRectangle().getGeometry().getExtent();
+
+ var projection1 = [extent[0], extent[1]];
+ var p1 = self.getMap().fromProjectionToPoint(projection1);
+ var projection2 = [extent[2], extent[3]];
+ var p2 = self.getMap().fromProjectionToPoint(projection2);
+ return new Bounds(p1, p2);
+};
+
+OpenLayersRectangle.prototype.setOptions = function (options) {
+ var self = this;
+ self._options = Object.assign(self._options, options);
+ var style = self.createStyle(self._options);
+ if (self.isShown()) {
+ self.getOpenLayersRectangle().setStyle(style);
+ }
+ self._style = style;
+};
+
+module.exports = OpenLayersRectangle;
diff --git a/frontend-js/src/main/js/map/canvas/Point.js b/frontend-js/src/main/js/map/canvas/Point.js
new file mode 100644
index 0000000000000000000000000000000000000000..ae53c3343776760b0b4fd26e9809bec824d4ff5d
--- /dev/null
+++ b/frontend-js/src/main/js/map/canvas/Point.js
@@ -0,0 +1,25 @@
+"use strict";
+
+// noinspection JSUnusedLocalSymbols
+var logger = require('../../logger');
+
+/**
+ *
+ * @param {number|string||Point} x
+ * @param {number|string} [y]
+ * @constructor
+ */
+function Point(x, y) {
+ if (x instanceof Point) {
+ this.x = x.x;
+ this.y = x.y;
+ } else if (typeof x === 'object') {
+ this.x = parseFloat(x.x);
+ this.y = parseFloat(x.y);
+ } else {
+ this.x = parseFloat(x);
+ this.y = parseFloat(y);
+ }
+}
+
+module.exports = Point;
diff --git a/frontend-js/src/main/js/map/canvas/Polyline.js b/frontend-js/src/main/js/map/canvas/Polyline.js
new file mode 100644
index 0000000000000000000000000000000000000000..3bd7cefcf8321dd0fae0bb97672418355c5fdc92
--- /dev/null
+++ b/frontend-js/src/main/js/map/canvas/Polyline.js
@@ -0,0 +1,67 @@
+"use strict";
+
+var MapCanvas = require('./MapCanvas');
+
+// noinspection JSUnusedLocalSymbols
+var logger = require('../../logger');
+var ObjectWithListeners = require('../../ObjectWithListeners');
+
+/**
+ * @param {MapCanvas} options.map
+ *
+ * @constructor
+ * @augments {ObjectWithListeners}
+ */
+function Polyline(options) {
+ ObjectWithListeners.call(this);
+ this.setMap(options.map);
+ this.registerListenerType("click");
+}
+
+Polyline.prototype = Object.create(ObjectWithListeners.prototype);
+Polyline.prototype.constructor = ObjectWithListeners;
+
+Polyline.prototype.show = function () {
+ throw new Error("Not implemented");
+};
+
+Polyline.prototype.hide = function () {
+ throw new Error("Not implemented");
+};
+
+/**
+ * @returns {Bounds}
+ */
+Polyline.prototype.getBounds = function () {
+ throw new Error("Not implemented");
+};
+
+// noinspection JSUnusedLocalSymbols
+/**
+ *
+ * @param {Object} options
+ */
+Polyline.prototype.setOptions = function (options) {
+ throw new Error("Not implemented");
+};
+
+/**
+ *
+ * @param {MapCanvas} map
+ */
+Polyline.prototype.setMap = function (map) {
+ if (!(map instanceof MapCanvas) && map !== null) {
+ throw new Error("Map must be of MapCanvas class");
+ }
+ this._map = map;
+};
+
+/**
+ *
+ * @returns {MapCanvas}
+ */
+Polyline.prototype.getMap = function () {
+ return this._map;
+};
+
+module.exports = Polyline;
diff --git a/frontend-js/src/main/js/map/canvas/Rectangle.js b/frontend-js/src/main/js/map/canvas/Rectangle.js
new file mode 100644
index 0000000000000000000000000000000000000000..b30ec9c9ea811cd02685665975a8009a7a960260
--- /dev/null
+++ b/frontend-js/src/main/js/map/canvas/Rectangle.js
@@ -0,0 +1,77 @@
+"use strict";
+
+var MapCanvas = require('./MapCanvas');
+
+// noinspection JSUnusedLocalSymbols
+var logger = require('../../logger');
+var ObjectWithListeners = require('../../ObjectWithListeners');
+
+/**
+ * @param {MapCanvas} options.map
+ *
+ * @constructor
+ * @augments {ObjectWithListeners}
+ */
+
+function Rectangle(options) {
+ ObjectWithListeners.call(this);
+ this.registerListenerType("click");
+ this.setMap(options.map);
+}
+
+Rectangle.prototype = Object.create(ObjectWithListeners.prototype);
+Rectangle.prototype.constructor = ObjectWithListeners;
+
+Rectangle.prototype.show = function () {
+ throw new Error("Not implemented");
+};
+
+Rectangle.prototype.hide = function () {
+ throw new Error("Not implemented");
+};
+
+/**
+ * @returns {Bounds}
+ */
+Rectangle.prototype.getBounds = function () {
+ throw new Error("Not implemented");
+};
+
+// noinspection JSUnusedLocalSymbols
+/**
+ *
+ * @param {Bounds} bounds
+ */
+Rectangle.prototype.setBounds = function (bounds) {
+ throw new Error("Not implemented");
+};
+
+// noinspection JSUnusedLocalSymbols
+/**
+ *
+ * @param {Object} options
+ */
+Rectangle.prototype.setOptions = function (options) {
+ throw new Error("Not implemented");
+};
+
+/**
+ *
+ * @param {MapCanvas} map
+ */
+Rectangle.prototype.setMap = function (map) {
+ if (!(map instanceof MapCanvas) && map !== null) {
+ throw new Error("Map must be of MapCanvas class");
+ }
+ this._map = map;
+};
+
+/**
+ *
+ * @returns {MapCanvas}
+ */
+Rectangle.prototype.getMap = function () {
+ return this._map;
+};
+
+module.exports = Rectangle;
diff --git a/frontend-js/src/main/js/map/data/Alias.js b/frontend-js/src/main/js/map/data/Alias.js
index 48cb8fe507810e3301ad2dc0bc82c467bba48957..c1207a70457ce3f9d17a5db9a55274b46667d811 100644
--- a/frontend-js/src/main/js/map/data/Alias.js
+++ b/frontend-js/src/main/js/map/data/Alias.js
@@ -1,6 +1,7 @@
"use strict";
var BioEntity = require("./BioEntity");
+var Point = require("../canvas/Point");
// noinspection JSUnusedLocalSymbols
var logger = require('../../logger');
@@ -8,7 +9,7 @@ var logger = require('../../logger');
/**
* Class representing alias data.
*
- * @param javaObject
+ * @param {Alias|Object} javaObject
* object de-serialized ajax query to the server side
*/
function Alias(javaObject) {
@@ -44,7 +45,7 @@ Alias.prototype.constructor = Alias;
* Updates alias with full data information. This function should be called when
* full information about alias is retrieved from server.
*
- * @param javaObject
+ * @param {Alias|Object} javaObject
* object representing data from server side
*/
Alias.prototype.update = function (javaObject) {
@@ -122,137 +123,280 @@ Alias.prototype.update = function (javaObject) {
}
};
+/**
+ *
+ * @returns {number}
+ */
Alias.prototype.getCharge = function () {
return this.charge;
};
+
+/**
+ *
+ * @param {number} charge
+ */
Alias.prototype.setCharge = function (charge) {
this.charge = charge;
};
+/**
+ *
+ * @returns {boolean}
+ */
Alias.prototype.getConstant = function () {
return this._constant;
};
+
+/**
+ *
+ * @param {boolean} constant
+ */
Alias.prototype.setConstant = function (constant) {
this._constant = constant;
};
+/**
+ *
+ * @returns {boolean}
+ */
Alias.prototype.getBoundaryCondition = function () {
return this._boundaryCondition;
};
+
+/**
+ *
+ * @param {boolean} boundaryCondition
+ */
Alias.prototype.setBoundaryCondition = function (boundaryCondition) {
this._boundaryCondition = boundaryCondition;
};
+/**
+ *
+ * @returns {number}
+ */
Alias.prototype.getInitialAmount = function () {
return this._initialAmount;
};
+
+/**
+ *
+ * @param {number} initialAmount
+ */
Alias.prototype.setInitialAmount = function (initialAmount) {
this._initialAmount = initialAmount;
};
+/**
+ *
+ * @returns {number}
+ */
Alias.prototype.getInitialConcentration = function () {
return this._initialConcentration;
};
+
+/**
+ *
+ * @param {number} initialConcentration
+ */
Alias.prototype.setInitialConcentration = function (initialConcentration) {
this._initialConcentration = initialConcentration;
};
+/**
+ *
+ * @returns {string[]}
+ */
Alias.prototype.getFormerSymbols = function () {
return this.formerSymbols;
};
+/**
+ *
+ * @param {string[]} formerSymbols
+ */
Alias.prototype.setFormerSymbols = function (formerSymbols) {
this.formerSymbols = formerSymbols;
};
+/**
+ *
+ * @returns {number}
+ */
Alias.prototype.getX = function () {
return this.x;
};
+/**
+ *
+ * @param {number} x
+ */
Alias.prototype.setX = function (x) {
if (x !== undefined) {
this.x = x;
}
};
+/**
+ *
+ * @param {number} y
+ */
Alias.prototype.setY = function (y) {
if (y !== undefined) {
this.y = y;
}
};
+/**
+ *
+ * @returns {number}
+ */
Alias.prototype.getY = function () {
return this.y;
};
+/**
+ *
+ * @param {number} elementId
+ */
Alias.prototype.setElementId = function (elementId) {
this._elementId = elementId;
};
+/**
+ *
+ * @returns {number}
+ */
Alias.prototype.getElementId = function () {
return this._elementId;
};
+/**
+ *
+ * @param {number} width
+ */
Alias.prototype.setWidth = function (width) {
if (width !== undefined) {
this.width = width;
}
};
+/**
+ *
+ * @param {number} height
+ */
Alias.prototype.setHeight = function (height) {
if (height !== undefined) {
this.height = height;
}
};
+
+/**
+ *
+ * @returns {number}
+ */
Alias.prototype.getWidth = function () {
return this.width;
};
+/**
+ *
+ * @returns {number}
+ */
Alias.prototype.getHeight = function () {
return this.height;
};
+/**
+ *
+ * @returns {string}
+ */
Alias.prototype.getName = function () {
return this.name;
};
+/**
+ *
+ * @param {string} name
+ */
Alias.prototype.setName = function (name) {
this.name = name;
};
+/**
+ *
+ * @returns {string}
+ */
Alias.prototype.getFullName = function () {
return this.fullName;
};
+/**
+ *
+ * @param {string} fullName
+ */
Alias.prototype.setFullName = function (fullName) {
this.fullName = fullName;
};
+/**
+ *
+ * @returns {number}
+ */
Alias.prototype.getCompartmentId = function () {
return this._compartmentId;
};
+/**
+ *
+ * @param {number} compartmentId
+ */
Alias.prototype.setCompartmentId = function (compartmentId) {
if (compartmentId !== null) {
this._compartmentId = compartmentId;
}
};
+
+/**
+ *
+ * @returns {number}
+ */
Alias.prototype.getComplexId = function () {
return this._complexId;
};
+/**
+ *
+ * @param {number} complexId
+ */
Alias.prototype.setComplexId = function (complexId) {
if (complexId !== null) {
this._complexId = complexId;
}
};
-Alias.prototype.getTransparencyLevel = function() {
+/**
+ *
+ * @returns {number}
+ */
+Alias.prototype.getTransparencyLevel = function () {
return this._transparencyLevel;
};
-Alias.prototype.setTransparencyLevel = function(transparencyLevel) {
+/**
+ *
+ * @param {number} transparencyLevel
+ */
+Alias.prototype.setTransparencyLevel = function (transparencyLevel) {
this._transparencyLevel = transparencyLevel;
};
+/**
+ *
+ * @returns {Point}
+ */
+Alias.prototype.getCenter = function () {
+ return new Point(this.getX() + this.getWidth() / 2, this.getY() + this.getHeight() / 2);
+};
+
module.exports = Alias;
diff --git a/frontend-js/src/main/js/map/data/Annotation.js b/frontend-js/src/main/js/map/data/Annotation.js
index 489e4a3dc71b70c1740229dc8251b16d52f66003..748eff92445c3ccd2e9bc33a806652a206279760 100644
--- a/frontend-js/src/main/js/map/data/Annotation.js
+++ b/frontend-js/src/main/js/map/data/Annotation.js
@@ -4,8 +4,24 @@
var Article = require("./Article");
+// noinspection JSUnusedLocalSymbols
var logger = require('../../logger');
+/**
+ * @typedef {Object} AnnotationOptions
+ * @property {string} link
+ * @property {number} id
+ * @property {Article|ArticleOptions} article
+ * @property {string} type
+ * @property {string} resource
+ * @property {string} annotatorClassName
+ */
+
+/**
+ *
+ * @param {AnnotationOptions|Annotation} javaObject
+ * @constructor
+ */
function Annotation(javaObject) {
if (javaObject instanceof Annotation) {
this.setLink(javaObject.getLink());
@@ -16,8 +32,6 @@ function Annotation(javaObject) {
this.setType(javaObject.getType());
this.setResource(javaObject.getResource());
this.setAnnotatorClassName(javaObject.getAnnotatorClassName());
- this.setDescriptionByType(javaObject.getDescriptionByType());
- this.setDescriptionByTypeRelation(javaObject.getDescriptionByTypeRelation());
} else {
this.setLink(javaObject.link);
this.setId(javaObject.id);
@@ -30,74 +44,106 @@ function Annotation(javaObject) {
}
}
-Annotation.prototype.setLink = function(link) {
+/**
+ *
+ * @param {string} link
+ */
+Annotation.prototype.setLink = function (link) {
this._link = link;
};
-Annotation.prototype.getLink = function() {
+/**
+ *
+ * @returns {string}
+ */
+Annotation.prototype.getLink = function () {
return this._link;
};
-Annotation.prototype.setId = function(id) {
+/**
+ *
+ * @param {number} id
+ */
+Annotation.prototype.setId = function (id) {
this._id = id;
};
-Annotation.prototype.getId = function() {
+/**
+ *
+ * @returns {number}
+ */
+Annotation.prototype.getId = function () {
return this._id;
};
-Annotation.prototype.setResource = function(resource) {
+/**
+ *
+ * @param {string} resource
+ */
+Annotation.prototype.setResource = function (resource) {
if (resource === undefined) {
throw new Error("resource cannot be undefined");
}
this._resource = resource;
};
-Annotation.prototype.getResource = function() {
+/**
+ *
+ * @returns {string}
+ */
+Annotation.prototype.getResource = function () {
return this._resource;
};
-Annotation.prototype.setType = function(type) {
+/**
+ *
+ * @param {string} type
+ */
+Annotation.prototype.setType = function (type) {
if (type === undefined) {
throw new Error("type cannot be undefined");
}
this._type = type;
};
-Annotation.prototype.getType = function() {
+/**
+ *
+ * @returns {string}
+ */
+Annotation.prototype.getType = function () {
return this._type;
};
-Annotation.prototype.setArticle = function(article) {
+/**
+ *
+ * @param {Article} article
+ */
+Annotation.prototype.setArticle = function (article) {
this._article = article;
};
-Annotation.prototype.getArticle = function() {
+/**
+ *
+ * @returns {Article}
+ */
+Annotation.prototype.getArticle = function () {
return this._article;
};
-Annotation.prototype.setAnnotatorClassName = function(annotatorClassName) {
+/**
+ *
+ * @param {string} annotatorClassName
+ */
+Annotation.prototype.setAnnotatorClassName = function (annotatorClassName) {
this._annotatorClassName = annotatorClassName;
};
-Annotation.prototype.getAnnotatorClassName = function() {
+/**
+ *
+ * @returns {string}
+ */
+Annotation.prototype.getAnnotatorClassName = function () {
return this._annotatorClassName;
};
-Annotation.prototype.setDescriptionByType = function(descriptionByType) {
- this._descriptionByType = descriptionByType;
-};
-
-Annotation.prototype.getDescriptionByType = function() {
- return this.descriptionByType;
-};
-
-Annotation.prototype.setDescriptionByTypeRelation = function(descriptionByTypeRelation) {
- this._descriptionByTypeRelation = descriptionByTypeRelation;
-};
-
-Annotation.prototype.getDescriptionByTypeRelation = function() {
- return this.descriptionByTypeRelation;
-};
-
module.exports = Annotation;
diff --git a/frontend-js/src/main/js/map/data/Annotator.js b/frontend-js/src/main/js/map/data/Annotator.js
index 4ab6dc69be536194de1ed0ae6e18f23665227cbb..0905f0f7b4e5960b348a2496080dcb03ab732994 100644
--- a/frontend-js/src/main/js/map/data/Annotator.js
+++ b/frontend-js/src/main/js/map/data/Annotator.js
@@ -59,29 +59,29 @@ Annotator.prototype.getUrl = function () {
Annotator.prototype.getParametersDefinitions = function () {
return this._parametersDefinitions;
-}
+};
Annotator.prototype.setParametersDefinitions = function (parametersDefinitions) {
this._parametersDefinitions = parametersDefinitions;
-}
+};
Annotator.prototype.setElementTypes = function (elementTypesClassNames, configuration) {
this._elementTypes = [];
var typeByClassName = {};
var types = configuration.getElementTypes();
- var i;
+ var i, type;
for (i = 0; i < types.length; i++) {
- var type = types[i];
+ type = types[i];
typeByClassName[type.className] = type;
}
types = configuration.getReactionTypes();
for (i = 0; i < types.length; i++) {
- var type = types[i];
+ type = types[i];
typeByClassName[type.className] = type;
}
for (i = 0; i < elementTypesClassNames.length; i++) {
- var type = typeByClassName[elementTypesClassNames[i]];
+ type = typeByClassName[elementTypesClassNames[i]];
if (type !== undefined) {
this._elementTypes.push(type)
} else {
diff --git a/frontend-js/src/main/js/map/data/Article.js b/frontend-js/src/main/js/map/data/Article.js
index 5b2e64734a6edd8a811c1766e3b66800291d6f94..584cd35a1eff35bd56791234b8cb3decd78c4336 100644
--- a/frontend-js/src/main/js/map/data/Article.js
+++ b/frontend-js/src/main/js/map/data/Article.js
@@ -1,5 +1,21 @@
"use strict";
+/**
+ * @typedef {Object} ArticleOptions
+ * @property {string} title
+ * @property {string[]} authors
+ * @property {string} journal
+ * @property {number} year
+ * @property {string} link
+ * @property {number} citationCount
+ * @property {string} id
+ */
+
+/**
+ *
+ * @param {Article|ArticleOptions} javaObject
+ * @constructor
+ */
function Article(javaObject) {
if (javaObject instanceof Article) {
this.setTitle(javaObject.getTitle());
@@ -20,62 +36,123 @@ function Article(javaObject) {
}
}
-Article.prototype.setTitle = function(title) {
+/**
+ *
+ * @param {string} title
+ */
+Article.prototype.setTitle = function (title) {
this._title = title;
};
-Article.prototype.getTitle = function() {
+/**
+ *
+ * @returns {string}
+ */
+Article.prototype.getTitle = function () {
return this._title;
};
-Article.prototype.setId = function(id) {
+/**
+ *
+ * @param {string} id
+ */
+Article.prototype.setId = function (id) {
this._id = id;
};
-Article.prototype.getAuthors = function() {
+/**
+ *
+ * @returns {string[]}
+ */
+Article.prototype.getAuthors = function () {
return this._authors;
};
-Article.prototype.setAuthors = function(authors) {
+
+/**
+ *
+ * @param {string[]} authors
+ */
+Article.prototype.setAuthors = function (authors) {
this._authors = authors;
};
-Article.prototype.setId = function(id) {
+/**
+ *
+ * @param {string} id
+ */
+Article.prototype.setId = function (id) {
this._id = id;
};
-Article.prototype.getId = function() {
+/**
+ *
+ * @returns {string}
+ */
+Article.prototype.getId = function () {
return this._id;
};
-Article.prototype.setJournal = function(journal) {
+/**
+ *
+ * @param {string} journal
+ */
+Article.prototype.setJournal = function (journal) {
this._journal = journal;
};
-Article.prototype.getJournal = function() {
+/**
+ *
+ * @returns {string}
+ */
+Article.prototype.getJournal = function () {
return this._journal;
};
-Article.prototype.setYear = function(year) {
+/**
+ *
+ * @param {number} year
+ */
+Article.prototype.setYear = function (year) {
this._year = year;
};
-Article.prototype.getYear = function() {
+/**
+ *
+ * @returns {number}
+ */
+Article.prototype.getYear = function () {
return this._year;
};
-Article.prototype.setLink = function(link) {
+/**
+ *
+ * @param {string} link
+ */
+Article.prototype.setLink = function (link) {
this._link = link;
};
-Article.prototype.getLink = function() {
+/**
+ *
+ * @returns {string}
+ */
+Article.prototype.getLink = function () {
return this._link;
};
-Article.prototype.setCitationCount = function(citationCount) {
+/**
+ *
+ * @param {number} citationCount
+ */
+Article.prototype.setCitationCount = function (citationCount) {
this._citationCount = citationCount;
};
-Article.prototype.getCitationCount = function() {
+/**
+ *
+ * @returns {number}
+ */
+Article.prototype.getCitationCount = function () {
return this._citationCount;
};
diff --git a/frontend-js/src/main/js/map/data/BioEntity.js b/frontend-js/src/main/js/map/data/BioEntity.js
index 9c5534da81e6a2f4e7bf515bf8dcc2c21ffa50e3..f5e5a8370645e2cff368bca1356317948e9aafb5 100644
--- a/frontend-js/src/main/js/map/data/BioEntity.js
+++ b/frontend-js/src/main/js/map/data/BioEntity.js
@@ -5,16 +5,23 @@ var Annotation = require("./Annotation");
/**
* Class representing BioEntity.
*
- * @param javaObject
- * object de-serialized ajax query to the server side
+ * @constructor
*/
function BioEntity() {
}
+/**
+ *
+ * @returns {number}
+ */
BioEntity.prototype.getLinkedSubmodelId = function() {
return this._linkedSubmodelId;
};
+/**
+ *
+ * @param {number} linkedSubmodelId
+ */
BioEntity.prototype.setLinkedSubmodelId = function(linkedSubmodelId) {
this._linkedSubmodelId = linkedSubmodelId;
};
@@ -22,12 +29,16 @@ BioEntity.prototype.setLinkedSubmodelId = function(linkedSubmodelId) {
/**
* Returns identifier of the BioEntity.
*
- * @returns identifier of the BioEntity
+ * @returns {number} identifier of the BioEntity
*/
BioEntity.prototype.getId = function() {
return this.id;
};
+/**
+ *
+ * @param {number} id
+ */
BioEntity.prototype.setId = function(id) {
this.id = id;
};
@@ -35,64 +46,120 @@ BioEntity.prototype.setId = function(id) {
/**
* Returns model identifier where {@link BioEntity} is located.
*
- * @returns model identifier where {@link BioEntity} is located
+ * @returns {number} model identifier where {@link BioEntity} is located
*/
BioEntity.prototype.getModelId = function() {
return this._modelId;
};
+/**
+ *
+ * @param {number} modelId
+ */
BioEntity.prototype.setModelId = function(modelId) {
this._modelId = modelId;
};
+/**
+ *
+ * @returns {boolean}
+ */
BioEntity.prototype.isComplete = function() {
return this._complete;
};
+/**
+ *
+ * @param {boolean} complete
+ */
BioEntity.prototype.setIsComplete = function(complete) {
this._complete = complete;
};
+/**
+ *
+ * @returns {string}
+ */
BioEntity.prototype.getSymbol = function() {
return this.symbol;
};
+/**
+ *
+ * @param {string} symbol
+ */
BioEntity.prototype.setSymbol = function(symbol) {
this.symbol = symbol;
};
+/**
+ *
+ * @returns {string}
+ */
BioEntity.prototype.getAbbreviation = function() {
return this._abbreviation;
};
+/**
+ *
+ * @param {string} abbreviation
+ */
BioEntity.prototype.setAbbreviation = function(abbreviation) {
this._abbreviation = abbreviation;
};
+/**
+ *
+ * @returns {string}
+ */
BioEntity.prototype.getFormula = function() {
return this._formula;
};
+/**
+ *
+ * @param {string} formula
+ */
BioEntity.prototype.setFormula = function(formula) {
this._formula = formula;
};
+/**
+ *
+ * @param {string[]} synonyms
+ */
BioEntity.prototype.setSynonyms = function(synonyms) {
this._synonyms = synonyms;
};
+/**
+ *
+ * @returns {string[]}
+ */
BioEntity.prototype.getSynonyms = function() {
return this._synonyms;
};
+/**
+ *
+ * @param {string} description
+ */
BioEntity.prototype.setDescription = function(description) {
this._description = description;
};
+/**
+ *
+ * @returns {string}
+ */
BioEntity.prototype.getDescription = function() {
return this._description;
};
+/**
+ *
+ * @param {string} type
+ */
BioEntity.prototype.setType = function(type) {
if (type === undefined) {
throw new Error("type cannot be undefined");
@@ -100,32 +167,61 @@ BioEntity.prototype.setType = function(type) {
this._type = type;
};
+/**
+ *
+ * @returns {string}
+ */
BioEntity.prototype.getType = function() {
return this._type;
};
+/**
+ *
+ * @param {string} type
+ * @returns {Object}
+ */
BioEntity.prototype.getOther = function(type) {
if (this._other !== undefined) {
return (type === undefined) ? this._other : this._other[type];
}
};
+/**
+ *
+ * @param {Object} other
+ */
BioEntity.prototype.setOther = function(other) {
this._other = other;
};
+/**
+ *
+ * @returns {number}
+ */
BioEntity.prototype.getHierarchyVisibilityLevel = function() {
return this._hierarchyVisibilityLevel;
};
+/**
+ *
+ * @param {number} hierarchyVisibilityLevel
+ */
BioEntity.prototype.setHierarchyVisibilityLevel = function(hierarchyVisibilityLevel) {
this._hierarchyVisibilityLevel = hierarchyVisibilityLevel;
};
+/**
+ *
+ * @returns {Annotation[]}
+ */
BioEntity.prototype.getReferences = function() {
return this.references;
};
+/**
+ *
+ * @param {Annotation[]} references
+ */
BioEntity.prototype.setReferences = function(references) {
if (references=== undefined) {
throw new Error("references must be defined");
@@ -136,4 +232,11 @@ BioEntity.prototype.setReferences = function(references) {
}
};
+/**
+ * @returns {Point}
+ */
+BioEntity.prototype.getCenter = function() {
+ throw new Error("Not implemented");
+};
+
module.exports = BioEntity;
diff --git a/frontend-js/src/main/js/map/data/Chemical.js b/frontend-js/src/main/js/map/data/Chemical.js
index 22609e10ce51a0e197f07143beb40cbadd84d6bb..b81080341613ea28776fca293cfeea911c381cc5 100644
--- a/frontend-js/src/main/js/map/data/Chemical.js
+++ b/frontend-js/src/main/js/map/data/Chemical.js
@@ -3,6 +3,11 @@
var Annotation = require("./Annotation");
var TargettingStructure = require("./TargettingStructure");
+/**
+ *
+ * @param javaObject
+ * @constructor
+ */
function Chemical(javaObject) {
TargettingStructure.call(this, javaObject);
if (javaObject !== undefined) {
@@ -18,66 +23,91 @@ function Chemical(javaObject) {
Chemical.prototype = Object.create(TargettingStructure.prototype);
Chemical.prototype.constructor = Chemical;
-Chemical.prototype.setDirectEvidence = function(directEvidence) {
+/**
+ *
+ * @param {string} directEvidence
+ */
+Chemical.prototype.setDirectEvidence = function (directEvidence) {
this._directEvidence = directEvidence;
};
-Chemical.prototype.getDirectEvidence = function() {
+/**
+ *
+ * @returns {string}
+ */
+Chemical.prototype.getDirectEvidence = function () {
return this._directEvidence;
};
-Chemical.prototype.setDirectEvidenceReferences = function(directEvidenceReferences) {
+/**
+ *
+ * @param {Annotation[]} directEvidenceReferences
+ */
+Chemical.prototype.setDirectEvidenceReferences = function (directEvidenceReferences) {
this._directEvidenceReferences = [];
for (var i = 0; i < directEvidenceReferences.length; i++) {
this._directEvidenceReferences.push(new Annotation(directEvidenceReferences[i]));
}
};
-Chemical.prototype.getDirectEvidenceReferences = function() {
- return this._directEvidenceReferences;
-};
-Chemical.prototype.setBrandNames = function(brandNames) {
- this._brandNames = brandNames;
-};
-
-Chemical.prototype.getBrandNames = function() {
- return this._brandNames;
+/**
+ *
+ * @returns {Annotation[]}
+ */
+Chemical.prototype.getDirectEvidenceReferences = function () {
+ return this._directEvidenceReferences;
};
-Chemical.prototype.setReferences = function(references) {
+/**
+ *
+ * @param {Annotation[]} references
+ */
+Chemical.prototype.setReferences = function (references) {
this._references = [];
for (var i = 0; i < references.length; i++) {
this._references.push(new Annotation(references[i]));
}
};
-Chemical.prototype.getReferences = function() {
+/**
+ *
+ * @returns {Annotation[]}
+ */
+Chemical.prototype.getReferences = function () {
return this._references;
};
-Chemical.prototype.setSynonyms = function(synonyms) {
+/**
+ *
+ * @param {string[]} synonyms
+ */
+Chemical.prototype.setSynonyms = function (synonyms) {
this._synonyms = synonyms;
};
-Chemical.prototype.getSynonyms = function() {
+/**
+ *
+ * @returns {string[]}
+ */
+Chemical.prototype.getSynonyms = function () {
return this._synonyms;
};
-Chemical.prototype.setDescription = function(description) {
+/**
+ *
+ * @param {string} description
+ */
+Chemical.prototype.setDescription = function (description) {
this._description = description;
};
-Chemical.prototype.getDescription = function() {
+/**
+ *
+ * @returns {string}
+ */
+Chemical.prototype.getDescription = function () {
return this._description;
};
-Chemical.prototype.setBloodBrainBarrier = function(bloodBrainBarrier) {
- this._bloodBrainBarrier = bloodBrainBarrier;
-};
-
-Chemical.prototype.getBloodBrainBarrier = function() {
- return this._bloodBrainBarrier;
-};
-
module.exports = Chemical;
diff --git a/frontend-js/src/main/js/map/data/Comment.js b/frontend-js/src/main/js/map/data/Comment.js
index b075e577929e33fde2d370162b5a1b1a6955dbf4..526ef4294432e5f00a22d020e1e47397c4d7bafd 100644
--- a/frontend-js/src/main/js/map/data/Comment.js
+++ b/frontend-js/src/main/js/map/data/Comment.js
@@ -1,13 +1,19 @@
"use strict";
var IdentifiedElement = require('./IdentifiedElement');
+var Point = require('../canvas/Point');
+/**
+ *
+ * @param javaObject
+ * @constructor
+ */
function Comment(javaObject) {
this.setIdentifiedElement(new IdentifiedElement({
- id : javaObject.elementId,
- type : javaObject.type,
- modelId : javaObject.modelId,
- icon : javaObject.icon
+ id: javaObject.elementId,
+ type: javaObject.type,
+ modelId: javaObject.modelId,
+ icon: javaObject.icon
}));
this.setId(javaObject.id);
this.setRemoved(javaObject.removed);
@@ -23,70 +29,163 @@ function Comment(javaObject) {
this.setEmail(javaObject.email);
}
-Comment.prototype.setIdentifiedElement = function(ie) {
+/**
+ *
+ * @param {IdentifiedElement} ie
+ */
+Comment.prototype.setIdentifiedElement = function (ie) {
this._ie = ie;
};
-Comment.prototype.getIdentifiedElement = function() {
+/**
+ *
+ * @returns {IdentifiedElement}
+ */
+Comment.prototype.getIdentifiedElement = function () {
return this._ie;
};
-Comment.prototype.setPinned = function(pinned) {
+/**
+ *
+ * @param {boolean} pinned
+ */
+Comment.prototype.setPinned = function (pinned) {
this._pinned = (pinned === true);
};
-Comment.prototype.setCoordinates = function(coordinates) {
- this._coordinates = new google.maps.Point(coordinates.x, coordinates.y);
+/**
+ *
+ * @param {{x:number, y:number}} coordinates
+ */
+Comment.prototype.setCoordinates = function (coordinates) {
+ this._coordinates = new Point(coordinates.x, coordinates.y);
};
-Comment.prototype.setRemoved = function(removed) {
+
+/**
+ *
+ * @param {boolean} removed
+ */
+Comment.prototype.setRemoved = function (removed) {
this._removed = (removed === true);
};
-Comment.prototype.setId = function(id) {
+/**
+ *
+ * @param {number} id
+ */
+Comment.prototype.setId = function (id) {
this._id = id;
};
-Comment.prototype.setContent = function(content) {
+
+/**
+ *
+ * @param {string} content
+ */
+Comment.prototype.setContent = function (content) {
this._content = content;
};
-Comment.prototype.isPinned = function() {
+/**
+ *
+ * @returns {boolean}
+ */
+Comment.prototype.isPinned = function () {
return this._pinned;
};
-Comment.prototype.getCoordinates = function() {
+
+/**
+ *
+ * @returns {Point}
+ */
+Comment.prototype.getCoordinates = function () {
return this._coordinates;
};
-Comment.prototype.isRemoved = function() {
+
+/**
+ *
+ * @returns {boolean}
+ */
+Comment.prototype.isRemoved = function () {
return this._removed;
};
-Comment.prototype.getId = function() {
+
+/**
+ *
+ * @returns {number}
+ */
+Comment.prototype.getId = function () {
return this._id;
};
-Comment.prototype.setTitle = function(title) {
+
+/**
+ *
+ * @param {string} title
+ */
+Comment.prototype.setTitle = function (title) {
this._title = title;
};
-Comment.prototype.getTitle = function() {
+
+/**
+ *
+ * @returns {string}
+ */
+Comment.prototype.getTitle = function () {
return this._title;
};
-Comment.prototype.getContent = function() {
+
+/**
+ *
+ * @returns {string}
+ */
+Comment.prototype.getContent = function () {
return this._content;
};
-Comment.prototype.setAuthor = function(author) {
+/**
+ *
+ * @param {string} author
+ */
+Comment.prototype.setAuthor = function (author) {
this._author = author;
};
-Comment.prototype.getAuthor = function() {
+
+/**
+ *
+ * @returns {string}
+ */
+Comment.prototype.getAuthor = function () {
return this._author;
};
-Comment.prototype.setEmail = function(email) {
+
+/**
+ *
+ * @param {string} email
+ */
+Comment.prototype.setEmail = function (email) {
this._email = email;
};
-Comment.prototype.getEmail = function() {
+
+/**
+ *
+ * @returns {string}
+ */
+Comment.prototype.getEmail = function () {
return this._email;
};
-Comment.prototype.setRemoveReason = function(removeReason) {
+
+/**
+ *
+ * @param {string} removeReason
+ */
+Comment.prototype.setRemoveReason = function (removeReason) {
this._removeReason = removeReason;
};
-Comment.prototype.getRemoveReason = function() {
+
+/**
+ *
+ * @returns {string}
+ */
+Comment.prototype.getRemoveReason = function () {
return this._removeReason;
};
diff --git a/frontend-js/src/main/js/map/data/DataOverlay.js b/frontend-js/src/main/js/map/data/DataOverlay.js
index a859fe054c2e50dd300201a31b05280bcecc4803..ce255617fead74d44631adeb16c44676b47d022a 100644
--- a/frontend-js/src/main/js/map/data/DataOverlay.js
+++ b/frontend-js/src/main/js/map/data/DataOverlay.js
@@ -9,6 +9,10 @@ var logger = require('../../logger');
/**
* Class representing data in a specific overlay.
+ *
+ * @param {number|Object} overlayId
+ * @param {string} [name]
+ * @constructor
*/
function DataOverlay(overlayId, name) {
this.setInitialized(false);
@@ -44,7 +48,7 @@ function DataOverlay(overlayId, name) {
/**
* Adds alias to the {@link DataOverlay}
*
- * @param overlayAlias
+ * @param {LayoutAlias} overlayAlias
* information about alias in the overlay
*/
DataOverlay.prototype.addAlias = function (overlayAlias) {
@@ -55,41 +59,73 @@ DataOverlay.prototype.addAlias = function (overlayAlias) {
/**
* Adds reaction to the {@link DataOverlay}
*
- * @param overlayReaction
+ * @param {LayoutReaction} overlayReaction
* information about reaction in the overlay
*/
DataOverlay.prototype.addReaction = function (overlayReaction) {
this.reactions.push(overlayReaction);
};
+/**
+ *
+ * @returns {number}
+ */
DataOverlay.prototype.getId = function () {
return this.id;
};
+/**
+ *
+ * @param {number|string} id
+ */
DataOverlay.prototype.setId = function (id) {
this.id = parseInt(id);
};
+/**
+ *
+ * @returns {string}
+ */
DataOverlay.prototype.getDescription = function () {
return this._description;
};
+/**
+ *
+ * @param {string} description
+ */
DataOverlay.prototype.setDescription = function (description) {
this._description = description;
};
+/**
+ *
+ * @returns {string}
+ */
DataOverlay.prototype.getCreator = function () {
return this._creator;
};
+/**
+ *
+ * @param {string} creator
+ */
DataOverlay.prototype.setCreator = function (creator) {
this._creator = creator;
};
+/**
+ *
+ * @returns {boolean}
+ */
DataOverlay.prototype.getInputDataAvailable = function () {
return this._inputDataAvailable;
};
+/**
+ *
+ * @param {string|boolean} inputDataAvailable
+ */
DataOverlay.prototype.setInputDataAvailable = function (inputDataAvailable) {
var value = inputDataAvailable;
if (inputDataAvailable === undefined) {
@@ -105,14 +141,27 @@ DataOverlay.prototype.setInputDataAvailable = function (inputDataAvailable) {
this._inputDataAvailable = value;
};
+/**
+ *
+ * @returns {string}
+ */
DataOverlay.prototype.getName = function () {
return this.name;
};
+/**
+ *
+ * @param {string} name
+ */
DataOverlay.prototype.setName = function (name) {
this.name = name;
};
+/**
+ *
+ * @param {number} modelId
+ * @returns {string|null}
+ */
DataOverlay.prototype.getImagesDirectory = function (modelId) {
for (var i = 0; i < this._imagesDirectory.length; i++) {
if (parseInt(this._imagesDirectory[i].modelId) === modelId) {
@@ -122,23 +171,40 @@ DataOverlay.prototype.getImagesDirectory = function (modelId) {
return null;
};
+/**
+ *
+ * @param {Object.<number,string>} imagesDirectory
+ */
DataOverlay.prototype.setImagesDirectory = function (imagesDirectory) {
this._imagesDirectory = imagesDirectory;
};
+/**
+ *
+ * @param {LayoutAlias} overlayAlias
+ */
DataOverlay.prototype.updateAlias = function (overlayAlias) {
if (this.aliasById[overlayAlias.getId()] === undefined) {
- logger.warn("Cannot update alias, it doesn't exist. Alias: ", overlayAlias.getId());
+ logger.warn("Cannot update alias, it doesn't exist. Alias: " + overlayAlias.getId());
} else {
this.aliasById[overlayAlias.getId()].update(overlayAlias);
}
-
};
+/**
+ *
+ * @param {number} id
+ * @returns {LayoutAlias}
+ */
DataOverlay.prototype.getAliasById = function (id) {
return this.aliasById[id];
};
+/**
+ *
+ * @param {number} id
+ * @returns {Promise<LayoutAlias>}
+ */
DataOverlay.prototype.getFullAliasById = function (id) {
var self = this;
var alias = self.getAliasById(id);
@@ -156,22 +222,42 @@ DataOverlay.prototype.getFullAliasById = function (id) {
return Promise.resolve(alias);
};
+/**
+ *
+ * @param {boolean} value
+ */
DataOverlay.prototype.setInitialized = function (value) {
this._initialized = value;
};
+/**
+ *
+ * @returns {boolean}
+ */
DataOverlay.prototype.isInitialized = function () {
return this._initialized;
};
+/**
+ *
+ * @returns {LayoutAlias[]}
+ */
DataOverlay.prototype.getAliases = function () {
return this.aliases;
};
+/**
+ *
+ * @returns {LayoutReaction[]}
+ */
DataOverlay.prototype.getReactions = function () {
return this.reactions;
};
+/**
+ *
+ * @returns {Promise}
+ */
DataOverlay.prototype.init = function () {
var self = this;
if (this.isInitialized()) {
@@ -193,54 +279,106 @@ DataOverlay.prototype.init = function () {
};
+/**
+ *
+ * @returns {boolean}
+ */
DataOverlay.prototype.getPublicOverlay = function () {
return this._publicOverlay;
};
+/**
+ *
+ * @param {boolean} publicOverlay
+ */
DataOverlay.prototype.setPublicOverlay = function (publicOverlay) {
this._publicOverlay = publicOverlay;
};
+/**
+ *
+ * @returns {boolean}
+ */
DataOverlay.prototype.isDefaultOverlay = function () {
return this._defaultOverlay;
};
+/**
+ *
+ * @param {boolean} defaultOverlay
+ */
DataOverlay.prototype.setDefaultOverlay = function (defaultOverlay) {
this._defaultOverlay = defaultOverlay;
};
+/**
+ *
+ * @returns {string}
+ */
DataOverlay.prototype.getContent = function () {
return this._content;
};
+/**
+ *
+ * @param {string} content
+ */
DataOverlay.prototype.setContent = function (content) {
this._content = content;
};
+/**
+ *
+ * @returns {number}
+ */
DataOverlay.prototype.getOrder = function () {
return this._order;
};
+/**
+ *
+ * @param {number} order
+ */
DataOverlay.prototype.setOrder = function (order) {
this._order = order;
};
+/**
+ *
+ * @returns {string}
+ */
DataOverlay.prototype.getFilename = function () {
return this._filename;
};
+/**
+ *
+ * @param {string} filename
+ */
DataOverlay.prototype.setFilename = function (filename) {
this._filename = filename;
};
+/**
+ *
+ * @returns {string}
+ */
DataOverlay.prototype.getType = function () {
return this._type;
};
+/**
+ *
+ * @param {string} type
+ */
DataOverlay.prototype.setType = function (type) {
this._type = type;
};
+/**
+ *
+ * @param {DataOverlay} overlay
+ */
DataOverlay.prototype.update = function (overlay) {
this.setName(overlay.getName());
this.setDescription(overlay.getDescription());
diff --git a/frontend-js/src/main/js/map/data/Drug.js b/frontend-js/src/main/js/map/data/Drug.js
index efbecca6aeee2b131aae5d23ca103d19523764c5..cebafe5a1cac2227db9a1e0f8496d22fa35b751d 100644
--- a/frontend-js/src/main/js/map/data/Drug.js
+++ b/frontend-js/src/main/js/map/data/Drug.js
@@ -3,6 +3,11 @@
var Annotation = require("./Annotation");
var TargettingStructure = require("./TargettingStructure");
+/**
+ *
+ * @param javaObject
+ * @constructor
+ */
function Drug(javaObject) {
TargettingStructure.call(this, javaObject);
if (javaObject !== undefined) {
@@ -17,46 +22,86 @@ function Drug(javaObject) {
Drug.prototype = Object.create(TargettingStructure.prototype);
Drug.prototype.constructor = Drug;
-Drug.prototype.setBrandNames = function(brandNames) {
+/**
+ *
+ * @param {string[]} brandNames
+ */
+Drug.prototype.setBrandNames = function (brandNames) {
this._brandNames = brandNames;
};
-Drug.prototype.getBrandNames = function() {
+/**
+ *
+ * @returns {string[]}
+ */
+Drug.prototype.getBrandNames = function () {
return this._brandNames;
};
-Drug.prototype.setReferences = function(references) {
+/**
+ *
+ * @param {Annotation[]}references
+ */
+Drug.prototype.setReferences = function (references) {
this._references = [];
for (var i = 0; i < references.length; i++) {
this._references.push(new Annotation(references[i]));
}
};
-Drug.prototype.getReferences = function() {
+/**
+ *
+ * @returns {Annotation[]}
+ */
+Drug.prototype.getReferences = function () {
return this._references;
};
-Drug.prototype.setSynonyms = function(synonyms) {
+/**
+ *
+ * @param {string[]} synonyms
+ */
+Drug.prototype.setSynonyms = function (synonyms) {
this._synonyms = synonyms;
};
-Drug.prototype.getSynonyms = function() {
+/**
+ *
+ * @returns {string[]}
+ */
+Drug.prototype.getSynonyms = function () {
return this._synonyms;
};
-Drug.prototype.setDescription = function(description) {
+/**
+ *
+ * @param {string} description
+ */
+Drug.prototype.setDescription = function (description) {
this._description = description;
};
-Drug.prototype.getDescription = function() {
+/**
+ *
+ * @returns {string}
+ */
+Drug.prototype.getDescription = function () {
return this._description;
};
-Drug.prototype.setBloodBrainBarrier = function(bloodBrainBarrier) {
+/**
+ *
+ * @param {boolean} bloodBrainBarrier
+ */
+Drug.prototype.setBloodBrainBarrier = function (bloodBrainBarrier) {
this._bloodBrainBarrier = bloodBrainBarrier;
};
-Drug.prototype.getBloodBrainBarrier = function() {
+/**
+ *
+ * @returns {boolean}
+ */
+Drug.prototype.getBloodBrainBarrier = function () {
return this._bloodBrainBarrier;
};
diff --git a/frontend-js/src/main/js/map/data/IdentifiedElement.js b/frontend-js/src/main/js/map/data/IdentifiedElement.js
index d591c7171bd048347b831ba840b76be7846a0734..59d26d826ed8f1c0d22ef80dbd2dba4459cdf471 100644
--- a/frontend-js/src/main/js/map/data/IdentifiedElement.js
+++ b/frontend-js/src/main/js/map/data/IdentifiedElement.js
@@ -5,9 +5,19 @@ var LayoutAlias = require('./LayoutAlias');
var Reaction = require('./Reaction');
var LayoutReaction = require('./LayoutReaction');
var PointData = require('./PointData');
+var Point = require('../canvas/Point');
var logger = require('../../logger');
+/**
+ * @typedef {Object} IdentifiedElementInput
+ * @property {string|number} [id]
+ * @property {string|number} [objectId]
+ * @property {number} modelId
+ * @property {string} type
+ * @property {string} [icon]
+ */
+
/**
* This is object representing element tha should be visualized on the map. It's
* very light and contains only the most important data. There are three types
@@ -18,42 +28,45 @@ var logger = require('../../logger');
* <li>"POINT" - for any point on the map, the data connected to this kind of
* objects are stored in {@link PointData}</li>
* </ul>
+ *
+ * @param {BioEntity|LayoutAlias|LayoutReaction|PointData|IdentifiedElementInput} object
+ * @constructor
*/
-function IdentifiedElement(javaObject) {
+function IdentifiedElement(object) {
this._visualizationdata = {};
- if (javaObject instanceof Alias) {
- this.setId(javaObject.getId());
- this.setModelId(javaObject.getModelId());
+ if (object instanceof Alias) {
+ this.setId(object.getId());
+ this.setModelId(object.getModelId());
this.setType("ALIAS");
- } else if (javaObject instanceof LayoutAlias) {
- this.setId(javaObject.getId());
- this.setModelId(javaObject.getModelId());
+ } else if (object instanceof LayoutAlias) {
+ this.setId(object.getId());
+ this.setModelId(object.getModelId());
this.setType("ALIAS");
- } else if (javaObject instanceof Reaction) {
- this.setId(javaObject.getId());
- this.setModelId(javaObject.getModelId());
+ } else if (object instanceof Reaction) {
+ this.setId(object.getId());
+ this.setModelId(object.getModelId());
this.setType("REACTION");
- } else if (javaObject instanceof LayoutReaction) {
- this.setId(javaObject.getId());
- this.setModelId(javaObject.getModelId());
+ } else if (object instanceof LayoutReaction) {
+ this.setId(object.getId());
+ this.setModelId(object.getModelId());
this.setType("REACTION");
- } else if (javaObject instanceof PointData) {
- this.setId(javaObject.getId());
- this.setModelId(javaObject.getModelId());
+ } else if (object instanceof PointData) {
+ this.setId(object.getId());
+ this.setModelId(object.getModelId());
this.setType("POINT");
} else {
// identifier of the object to visualize
- if (javaObject.objectId === undefined) {
- this.setId(javaObject.id);
+ if (object.objectId === undefined) {
+ this.setId(object.id);
} else {
- this.setId(javaObject.objectId);
+ this.setId(object.objectId);
}
// which marker should be used to show this object
- this.setIcon(javaObject.icon);
+ this.setIcon(object.icon);
// on which model the element is located
- this.setModelId(javaObject.modelId);
+ this.setModelId(object.modelId);
// what kind of object we are talking about
- this.setType(javaObject.type);
+ this.setType(object.type);
}
if (this.getType() === "POINT") {
@@ -68,25 +81,25 @@ function IdentifiedElement(javaObject) {
}
var x = parseFloat(tmp[0]).toFixed(2);
var y = parseFloat(tmp[1]).toFixed(2);
- this._point = new google.maps.Point(x, y);
+ this._point = new Point(x, y);
this.setId("(" + x + "," + y + ")");
} else if (this.getType() !== "ALIAS" && this.getType() !== "REACTION") {
throw new Error("Unknown type of identified element: " + this.getType());
}
- if (this.getId() === undefined || this.getId() === null) {
- throw new Error("Id not defined for element: " + javaObject);
+ if (this.getId() === undefined) {
+ throw new Error("Id not defined for element: " + object);
}
}
/**
* Returns point where it should be visualized when the type of object is
* "POINT".
- *
- * @returns {@link google.maps.Point} where it should be visualized when the
+ *
+ * @returns {Point|null} where it should be visualized when the
* type of object is "POINT".
*/
-IdentifiedElement.prototype.getPoint = function() {
+IdentifiedElement.prototype.getPoint = function () {
if (this._point === undefined || this._point === null) {
logger.warn("No point associated with IdentifiedElement");
return null;
@@ -97,14 +110,14 @@ IdentifiedElement.prototype.getPoint = function() {
/**
* Returns element identifier.
- *
- * @returns element identifier
+ *
+ * @returns {string|number} element identifier
*/
-IdentifiedElement.prototype.getId = function() {
+IdentifiedElement.prototype.getId = function () {
return this.id;
};
-IdentifiedElement.prototype.setId = function(id) {
+IdentifiedElement.prototype.setId = function (id) {
// some elements are identified by id that is not a number (like point on the
// map)
if (!isNaN(id)) {
@@ -113,7 +126,11 @@ IdentifiedElement.prototype.setId = function(id) {
this.id = id;
};
-IdentifiedElement.prototype.setModelId = function(modelId) {
+/**
+ *
+ * @param {number|string} modelId
+ */
+IdentifiedElement.prototype.setModelId = function (modelId) {
if (modelId === undefined || modelId === null) {
throw new Error("ModelId is invalid");
}
@@ -122,10 +139,10 @@ IdentifiedElement.prototype.setModelId = function(modelId) {
/**
* Returns model identifier where element is placed.
- *
- * @returns model identifier
+ *
+ * @returns {number} model identifier
*/
-IdentifiedElement.prototype.getModelId = function() {
+IdentifiedElement.prototype.getModelId = function () {
return this.modelId;
};
@@ -137,14 +154,14 @@ IdentifiedElement.prototype.getModelId = function() {
* <li>"POINT" - for any point on the map, the data connected to this kind of
* objects are stored in {@link PointData}</li>
* </ul>
- *
- * @returns type of the element
+ *
+ * @returns {string} type of the element
*/
-IdentifiedElement.prototype.getType = function() {
+IdentifiedElement.prototype.getType = function () {
return this.type;
};
-IdentifiedElement.prototype.setType = function(type) {
+IdentifiedElement.prototype.setType = function (type) {
if (type === undefined || type === null) {
throw new Error("Type not defined");
}
@@ -154,77 +171,80 @@ IdentifiedElement.prototype.setType = function(type) {
/**
* Returns icon that should be used for visualization.
- *
- * @returns icon that should be used for visualization
+ *
+ * @returns {string|undefined} icon that should be used for visualization
*/
-IdentifiedElement.prototype.getIcon = function() {
+IdentifiedElement.prototype.getIcon = function () {
return this._visualizationdata._icon;
};
-IdentifiedElement.prototype.setIcon = function(icon) {
+/**
+ *
+ * @param {string} icon
+ */
+IdentifiedElement.prototype.setIcon = function (icon) {
this._visualizationdata._icon = icon;
};
-IdentifiedElement.prototype.getColor = function() {
+/**
+ * @returns {string|undefined}
+ */
+IdentifiedElement.prototype.getColor = function () {
return this._visualizationdata._color;
};
-IdentifiedElement.prototype.setColor = function(color) {
+IdentifiedElement.prototype.setColor = function (color) {
this._visualizationdata._color = color;
};
-IdentifiedElement.prototype.getOpacity = function() {
+IdentifiedElement.prototype.getOpacity = function () {
return this._visualizationdata._opacity;
};
-IdentifiedElement.prototype.setOpacity = function(opacity) {
+IdentifiedElement.prototype.setOpacity = function (opacity) {
this._visualizationdata._opacity = opacity;
};
-IdentifiedElement.prototype.getLineWeight = function() {
+IdentifiedElement.prototype.getLineWeight = function () {
return this._visualizationdata._lineWeight;
};
-IdentifiedElement.prototype.setLineWeight = function(lineWeight) {
+IdentifiedElement.prototype.setLineWeight = function (lineWeight) {
this._visualizationdata._lineWeight = lineWeight;
};
-IdentifiedElement.prototype.getLineOpacity = function() {
+IdentifiedElement.prototype.getLineOpacity = function () {
return this._visualizationdata._lineOpacity;
};
-IdentifiedElement.prototype.setLineOpacity = function(lineOpacity) {
+IdentifiedElement.prototype.setLineOpacity = function (lineOpacity) {
this._visualizationdata._lineOpacity = lineOpacity;
};
-IdentifiedElement.prototype.getLineColor = function() {
+IdentifiedElement.prototype.getLineColor = function () {
return this._visualizationdata._lineColor;
};
-IdentifiedElement.prototype.setLineColor = function(lineColor) {
+IdentifiedElement.prototype.setLineColor = function (lineColor) {
this._visualizationdata._lineColor = lineColor;
};
-IdentifiedElement.prototype.getOnClickHandler = function() {
- return this._visualizationdata._onClickHandler;
-};
-
-IdentifiedElement.prototype.setOnClickHandler = function(onClickHandler) {
- this._visualizationdata._onClickHandler = onClickHandler;
-};
-
-IdentifiedElement.prototype.equals = function(argument) {
+IdentifiedElement.prototype.equals = function (argument) {
if (argument instanceof IdentifiedElement) {
return (this.getType() === argument.getType() && //
- this.getId() === argument.getId() && //
- this.getModelId() === argument.getModelId());
+ this.getId() === argument.getId() && //
+ this.getModelId() === argument.getModelId());
} else {
return false;
}
};
-IdentifiedElement.prototype.toString = function() {
+/**
+ *
+ * @returns {string}
+ */
+IdentifiedElement.prototype.toString = function () {
var self = this;
return "[" + IdentifiedElement.prototype.constructor.name + "] " + self.getType() + " " + self.getId() + " (model: "
- + self.getModelId() + ")";
+ + self.getModelId() + ")";
};
module.exports = IdentifiedElement;
diff --git a/frontend-js/src/main/js/map/data/MapModel.js b/frontend-js/src/main/js/map/data/MapModel.js
index d23215a8bed68c65c77d7d6c9d6f018cb919f84e..81a5dae53e5580ab0fa912bd3b7df2be7257ad81 100644
--- a/frontend-js/src/main/js/map/data/MapModel.js
+++ b/frontend-js/src/main/js/map/data/MapModel.js
@@ -7,6 +7,7 @@ var logger = require('../../logger');
var Alias = require('./Alias');
var IdentifiedElement = require('./IdentifiedElement');
var PointData = require('./PointData');
+var Point = require('../canvas/Point');
var Reaction = require('./Reaction');
// This file describes javascript representation of Java Model class that
@@ -82,7 +83,7 @@ MapModel.prototype.getAliases = function (params) {
type: params.type,
modelId: self.getId(),
includedCompartmentIds: params.includedCompartmentIds,
- excludedCompartmentIds: params.excludedCompartmentIds,
+ excludedCompartmentIds: params.excludedCompartmentIds
}).then(function (lightAliases) {
var identifiedElements = [];
@@ -97,9 +98,10 @@ MapModel.prototype.getAliases = function (params) {
/**
* Returns {@link Alias} by identifier.
*
- * @param id
+ * @param {boolean} [complete]
+ * @param {number} id
* identifier of the {@link Alias}
- * @returns {@link Alias} by identifier
+ * @returns {PromiseLike<Alias>} by identifier
*/
MapModel.prototype.getAliasById = function (id, complete) {
var self = this;
@@ -140,7 +142,8 @@ MapModel.prototype.getCompleteAliasById = function (id) {
*
* @param id
* identifier of the {@link Reaction}
- * @returns {@link Reaction} by identifier
+ * @param {boolean} [complete]
+ * @returns {Promise<Reaction>| PromiseLike<Reaction>} by identifier
*/
MapModel.prototype.getReactionById = function (id, complete) {
var self = this;
@@ -343,12 +346,12 @@ MapModel.prototype.addReaction = function (reactionData) {
/**
* Returns {@link PointData} for a given point on the map.
*
- * @param point
- * {@link google.maps.Point} where we are requesting data
- * @returns {@link PointData} for a given point on the map
+ * @param {Point} inputPoint
+ * where we are requesting data
+ * @returns {PointData} for a given point on the map
*/
MapModel.prototype.getPointDataByPoint = function (inputPoint) {
- if (inputPoint instanceof google.maps.Point) {
+ if (inputPoint instanceof Point) {
var point = this._roundPoint(inputPoint);
var id = this._pointToId(point);
var result = this._pointsData[id];
@@ -358,7 +361,7 @@ MapModel.prototype.getPointDataByPoint = function (inputPoint) {
}
return result;
} else {
- logger.warn("point must be of class: google.maps.Point");
+ logger.warn("point must be of class: Point");
return null;
}
};
@@ -368,24 +371,24 @@ MapModel.prototype.getPointDataByPoint = function (inputPoint) {
*
* @param point
* input point
- * @returns {google.maps.Point} point where x and y coordinate are rounded to 2
+ * @returns {Point} point where x and y coordinate are rounded to 2
* decimal places
*/
MapModel.prototype._roundPoint = function (point) {
var x = parseFloat(point.x).toFixed(2);
var y = parseFloat(point.y).toFixed(2);
- return new google.maps.Point(x, y);
+ return new Point(x, y);
};
/**
* Transform point into string identifier.
*
* @param point
- * {google.maps.Point} to transform
+ * {Point} to transform
* @returns {String} string identifier for a given point
*/
MapModel.prototype._pointToId = function (point) {
- if (point instanceof google.maps.Point) {
+ if (point instanceof Point) {
return "(" + point.x + ", " + point.y + ")";
} else {
return point.replace(/ /g, '');
@@ -400,6 +403,10 @@ MapModel.prototype.setId = function (id) {
this.id = parseInt(id);
};
+/**
+ *
+ * @returns {number}
+ */
MapModel.prototype.getWidth = function () {
return this._width;
};
@@ -408,6 +415,10 @@ MapModel.prototype.setWidth = function (width) {
this._width = width;
};
+/**
+ *
+ * @returns {number}
+ */
MapModel.prototype.getHeight = function () {
return this._height;
};
@@ -424,6 +435,10 @@ MapModel.prototype.setName = function (name) {
this._name = name;
};
+/**
+ *
+ * @returns {number}
+ */
MapModel.prototype.getMinZoom = function () {
return this._minZoom;
};
@@ -432,6 +447,10 @@ MapModel.prototype.setMinZoom = function (minZoom) {
this._minZoom = minZoom;
};
+/**
+ *
+ * @returns {number|null}
+ */
MapModel.prototype.getDefaultZoomLevel = function () {
return this._defaultZoomLevel;
};
@@ -440,6 +459,10 @@ MapModel.prototype.setDefaultZoomLevel = function (defaultZoomLevel) {
this._defaultZoomLevel = defaultZoomLevel;
};
+/**
+ *
+ * @returns {null|number}
+ */
MapModel.prototype.getDefaultCenterX = function () {
return this._defaultCenterX;
};
@@ -448,6 +471,10 @@ MapModel.prototype.setDefaultCenterX = function (defaultCenterX) {
this._defaultCenterX = defaultCenterX;
};
+/**
+ *
+ * @returns {number|null}
+ */
MapModel.prototype.getDefaultCenterY = function () {
return this._defaultCenterY;
};
@@ -464,17 +491,6 @@ MapModel.prototype.setSubmodelType = function (submodelType) {
this._submodelType = submodelType;
};
-function createLatLng(param) {
- if (param === undefined) {
- return null;
- }
- if (param instanceof google.maps.LatLng) {
- return new google.maps.LatLng(param.lat(), param.lng());
- } else {
- return new google.maps.LatLng(param.lat, param.lng);
- }
-}
-
MapModel.prototype.getMaxZoom = function () {
return this._maxZoom;
};
@@ -483,6 +499,10 @@ MapModel.prototype.setMaxZoom = function (maxZoom) {
this._maxZoom = maxZoom;
};
+/**
+ *
+ * @returns {number}
+ */
MapModel.prototype.getTileSize = function () {
return this._tileSize;
};
@@ -561,7 +581,7 @@ MapModel.prototype.isAvailable = function (ie, complete) {
}
element = this._pointsData[id];
} else {
- throw new Error("Unknown type: " + ie.getType(), complete);
+ throw new Error("Unknown type: " + ie.getType() + "," + complete);
}
if (element === undefined) {
return false;
diff --git a/frontend-js/src/main/js/map/data/PointData.js b/frontend-js/src/main/js/map/data/PointData.js
index f12fc80009fb740ef5c3c15f7b14f4141f4fbea2..c97186d002ff55a144528fc60bd471d11ded4e96 100644
--- a/frontend-js/src/main/js/map/data/PointData.js
+++ b/frontend-js/src/main/js/map/data/PointData.js
@@ -1,22 +1,23 @@
"use strict";
+var Point = require('../canvas/Point');
+
/**
* Object representing information for specific point on the map.
*/
function PointData(javaObject, modelId) {
- if (javaObject instanceof google.maps.Point) {
+ if (javaObject instanceof Point) {
this._point = javaObject;
this._modelId = modelId;
} else if (javaObject.constructor.name === "IdentifiedElement") {
this._point = javaObject.getPoint();
this._modelId = javaObject.getModelId();
} else {
- var tmp = javaObject.idObject;
- tmp = javaObject.idObject.replace("Point2D.Double", "");
+ var tmp = javaObject.idObject.replace("Point2D.Double", "");
tmp = JSON.parse(tmp);
var x = parseFloat(tmp[0]).toFixed(2);
var y = parseFloat(tmp[1]).toFixed(2);
- this._point = new google.maps.Point(x, y);
+ this._point = new Point(x, y);
this._modelId = modelId;
}
this._id = "(" + parseFloat(this._point.x).toFixed(2) + "," + parseFloat(this._point.y).toFixed(2) + ")";
@@ -25,7 +26,7 @@ function PointData(javaObject, modelId) {
/**
* Returns identifier of the object.
*
- * @returns {google.maps.Point} that is identifier of the object
+ * @returns {string} that is identifier of the object
*/
PointData.prototype.getId = function() {
return this._id;
@@ -34,12 +35,16 @@ PointData.prototype.getId = function() {
/**
* Returns point to which this object corresponds.
*
- * @returns {google.maps.Point} to which this object corresponds
+ * @returns {Point} to which this object corresponds
*/
PointData.prototype.getPoint = function() {
return this._point;
};
+/**
+ *
+ * @returns {number}
+ */
PointData.prototype.getModelId = function() {
return this._modelId;
};
diff --git a/frontend-js/src/main/js/map/data/Project.js b/frontend-js/src/main/js/map/data/Project.js
index 47432a6b4398e4e03f0e46b6783c4418817f319c..e5053fbc932bb3d7674196add1a69008caece753 100644
--- a/frontend-js/src/main/js/map/data/Project.js
+++ b/frontend-js/src/main/js/map/data/Project.js
@@ -13,6 +13,11 @@ var Promise = require('bluebird');
// noinspection JSUnusedLocalSymbols
var logger = require('../../logger');
+/**
+ *
+ * @param {Project|string|Object} [data]
+ * @constructor
+ */
function Project(data) {
// call super constructor
ObjectWithListeners.call(this);
@@ -32,6 +37,11 @@ function Project(data) {
Project.prototype = Object.create(ObjectWithListeners.prototype);
Project.prototype.constructor = Project;
+/**
+ *
+ * @param {Project|string} data
+ * @private
+ */
Project.prototype.loadFromData = function (data) {
var self = this;
if (typeof data === "string") {
@@ -39,8 +49,7 @@ Project.prototype.loadFromData = function (data) {
data = JSON.parse(data.replace(/\n/g, " "));
}
if (data instanceof Project) {
- self.update(data);
-
+ self._update(data);
} else {
self.setId(parseInt(data.idObject));
self.setProjectId(data.projectId);
@@ -56,12 +65,26 @@ Project.prototype.loadFromData = function (data) {
self.setProgress(data.progress);
self.setHasWarnings(data.warnings);
self.setHasErrors(data.errors);
-
- self.callListeners("onreload");
+ self.setMapCanvasType(data.mapCanvasType);
}
};
+/**
+ *
+ * @param {Project} data
+ * @returns {PromiseLike}
+ */
Project.prototype.update = function (data) {
+ this._update(data);
+ return this.callListeners("onreload");
+};
+
+/**
+ *
+ * @param {Project} data
+ * @private
+ */
+Project.prototype._update = function (data) {
var self = this;
self.setId(data.getId());
self.setProjectId(data.getProjectId());
@@ -77,6 +100,7 @@ Project.prototype.update = function (data) {
self.setNotifyEmail(data.getNotifyEmail());
self.setHasWarnings(data.hasWarnings());
self.setHasErrors(data.hasErrors());
+ self.setMapCanvasType(data.getMapCanvasType());
if (data.getModels() !== undefined) {
var models = data.getModels();
@@ -84,67 +108,133 @@ Project.prototype.update = function (data) {
self.addModel(new Model(models[i]));
}
}
-
- self.callListeners("onreload");
};
+/**
+ *
+ * @returns {number}
+ */
Project.prototype.getId = function () {
return this._id;
};
+/**
+ *
+ * @param {number|string} id
+ */
Project.prototype.setId = function (id) {
this._id = parseInt(id);
};
+/**
+ *
+ * @returns {boolean}
+ */
Project.prototype.hasErrors = function () {
return this._hasErrors === true;
};
+/**
+ *
+ * @param {boolean} hasErrors
+ */
Project.prototype.setHasErrors = function (hasErrors) {
this._hasErrors = hasErrors;
};
+/**
+ *
+ * @returns {boolean}
+ */
Project.prototype.hasWarnings = function () {
return this._hasWarnings === true;
};
+/**
+ *
+ * @param {boolean} hasWarnings
+ */
Project.prototype.setHasWarnings = function (hasWarnings) {
this._hasWarnings = hasWarnings;
};
+/**
+ *
+ * @returns {string}
+ */
Project.prototype.getProjectId = function () {
return this._projectId;
};
+/**
+ *
+ * @param {string} projectId
+ */
Project.prototype.setProjectId = function (projectId) {
this._projectId = projectId;
};
+/**
+ *
+ * @returns {string}
+ */
Project.prototype.getDirectory = function () {
return this._directory;
};
+/**
+ *
+ * @param {string} directory
+ */
Project.prototype.setDirectory = function (directory) {
this._directory = directory;
};
+/**
+ *
+ * @returns {string}
+ */
Project.prototype.getVersion = function () {
return this._version;
};
+/**
+ *
+ * @param {string} version
+ */
Project.prototype.setVersion = function (version) {
this._version = version;
};
+/**
+ *
+ * @returns {string}
+ */
Project.prototype.getName = function () {
return this._name;
};
+
+/**
+ *
+ * @param {string} name
+ */
Project.prototype.setName = function (name) {
this._name = name;
};
+
+/**
+ *
+ * @returns {MapModel[]}
+ */
Project.prototype.getModels = function () {
return this._models;
};
+
+/**
+ *
+ * @param modelId
+ * @returns {MapModel|null}
+ */
Project.prototype.getModelById = function (modelId) {
for (var i = 0; i < this._models.length; i++) {
if (this._models[i].getId() === modelId) {
@@ -153,10 +243,19 @@ Project.prototype.getModelById = function (modelId) {
}
return null;
};
+
+/**
+ *
+ * @param {MapModel[]} models
+ */
Project.prototype.setModels = function (models) {
this._models = models;
};
+/**
+ *
+ * @param {MapModel} model
+ */
Project.prototype.addModel = function (model) {
this._models.push(model);
};
@@ -175,9 +274,18 @@ Project.prototype.setTopOverviewImage = function (topOverviewImage) {
this._topOverviewImage = topOverviewImage;
};
+/**
+ *
+ * @returns {Annotation}
+ */
Project.prototype.getDisease = function () {
return this._disease;
};
+
+/**
+ *
+ * @param {Object} disease
+ */
Project.prototype.setDisease = function (disease) {
if (disease !== undefined && disease !== null) {
this._disease = new Annotation(disease);
@@ -186,9 +294,18 @@ Project.prototype.setDisease = function (disease) {
}
};
+/**
+ *
+ * @returns {Annotation}
+ */
Project.prototype.getOrganism = function () {
return this._organism;
};
+
+/**
+ *
+ * @param {Object} organism
+ */
Project.prototype.setOrganism = function (organism) {
if (organism !== undefined && organism !== null) {
this._organism = new Annotation(organism);
@@ -197,27 +314,75 @@ Project.prototype.setOrganism = function (organism) {
}
};
+/**
+ *
+ * @returns {string}
+ */
+Project.prototype.getMapCanvasType = function () {
+ return this._mapCanvasType;
+};
+
+/**
+ *
+ * @param {string} mapCanvasType
+ */
+Project.prototype.setMapCanvasType = function (mapCanvasType) {
+ this._mapCanvasType = mapCanvasType;
+};
+
+/**
+ *
+ * @returns {string}
+ */
Project.prototype.getStatus = function () {
return this._status;
};
+
+/**
+ *
+ * @param {string} status
+ */
Project.prototype.setStatus = function (status) {
this._status = status;
};
+/**
+ *
+ * @returns {number}
+ */
Project.prototype.getProgress = function () {
return this._progress;
};
+
+/**
+ *
+ * @param {number} progress
+ */
Project.prototype.setProgress = function (progress) {
this._progress = progress;
};
+/**
+ *
+ * @returns {string}
+ */
Project.prototype.getNotifyEmail = function () {
return this._notifyEmail;
};
+
+/**
+ *
+ * @param {string} notifyEmail
+ */
Project.prototype.setNotifyEmail = function (notifyEmail) {
this._notifyEmail = notifyEmail;
};
+/**
+ *
+ * @param {DataOverlay} overlay
+ * @param {boolean} [updateWhenExists=false]
+ */
Project.prototype.addDataOverlay = function (overlay, updateWhenExists) {
var overlayToAdd = null;
if (overlay instanceof DataOverlay) {
@@ -237,14 +402,28 @@ Project.prototype.addDataOverlay = function (overlay, updateWhenExists) {
}
};
+/**
+ *
+ * @param {DataOverlay} overlay
+ */
Project.prototype.addOrUpdateDataOverlay = function (overlay) {
this.addDataOverlay(overlay, true);
};
+
+/**
+ *
+ * @param {DataOverlay[]} overlay
+ */
Project.prototype.addOrUpdateDataOverlays = function (overlay) {
this.addDataOverlays(overlay, true);
};
+/**
+ *
+ * @param {DataOverlay[]} overlays
+ * @param {boolean} updateWhenExists
+ */
Project.prototype.addDataOverlays = function (overlays, updateWhenExists) {
if (overlays === undefined) {
logger.warn("Overlays are undefined...");
@@ -255,7 +434,10 @@ Project.prototype.addDataOverlays = function (overlays, updateWhenExists) {
}
};
-
+/**
+ *
+ * @returns {DataOverlay[]}
+ */
Project.prototype.getDataOverlays = function () {
var result = [];
for (var id in this._dataOverlays) {
@@ -277,9 +459,9 @@ Project.prototype.getDataOverlays = function () {
/**
* Returns data overlay for a given overlay identifier.
*
- * @param overlayId
+ * @param {number} overlayId
* overlay identifier
- * @returns {DataOverlay} for a given overlay identifier
+ * @returns {PromiseLike<DataOverlay>} for a given overlay identifier
*/
Project.prototype.getDataOverlayById = function (overlayId) {
var self = this;
@@ -287,7 +469,7 @@ Project.prototype.getDataOverlayById = function (overlayId) {
return Promise.resolve(self._dataOverlays[overlayId]);
} else {
return ServerConnector.getOverlayById(overlayId).then(function (overlay) {
- self.addDataOverlay(overlay);
+ self.addDataOverlay(overlay, false);
return self._dataOverlays[overlayId];
});
}
@@ -296,8 +478,8 @@ Project.prototype.getDataOverlayById = function (overlayId) {
/**
* Returns promise with list of elements pointing to the submap.
*
- * @param modelId id of the submap
- * @returns {Bluebird} for a given overlay identifier
+ * @param {number} modelId id of the submap
+ * @returns {Promise} for a given overlay identifier
*/
Project.prototype.getElementsPointingToSubmap = function (modelId) {
var self = this;
diff --git a/frontend-js/src/main/js/map/data/Reaction.js b/frontend-js/src/main/js/map/data/Reaction.js
index 61529b9a49d1e6bae21be71d740ac0c41fc9884f..8a0499c487eda93207e340385d29b1367444edb3 100644
--- a/frontend-js/src/main/js/map/data/Reaction.js
+++ b/frontend-js/src/main/js/map/data/Reaction.js
@@ -4,6 +4,7 @@
var BioEntity = require("./BioEntity");
var KineticLaw = require("./KineticLaw");
+var Point = require("../canvas/Point");
var Modifier = require('./Modifier');
var Product = require('./Product');
@@ -59,10 +60,18 @@ function Reaction(javaObject) {
Reaction.prototype = Object.create(BioEntity.prototype);
Reaction.prototype.constructor = Reaction;
+/**
+ *
+ * @returns {Point}
+ */
Reaction.prototype.getCenter = function () {
return this._center;
};
+/**
+ *
+ * @returns {Object[]}
+ */
Reaction.prototype.getLines = function () {
var result = [];
result = result.concat(this.startLines);
@@ -85,7 +94,7 @@ Reaction.prototype.setCenter = function (center) {
if (center === null || center === undefined) {
throw new Error("Setting undefined center: " + center);
}
- this._center = center;
+ this._center = new Point(center);
};
Reaction.prototype.update = function (javaObject) {
diff --git a/frontend-js/src/main/js/map/marker/AbstractMarker.js b/frontend-js/src/main/js/map/marker/AbstractMarker.js
index 158b9c59adb40057453ec2e770fe1b1f027dbbf3..2ea04f698cdc2578d292e6f48f78675a42c2e2f1 100644
--- a/frontend-js/src/main/js/map/marker/AbstractMarker.js
+++ b/frontend-js/src/main/js/map/marker/AbstractMarker.js
@@ -10,6 +10,11 @@ var ObjectWithListeners = require('../../ObjectWithListeners');
/**
* Class representing Marker (called sometimes bubble) that we visualize on the
* map.
+ *
+ * @param {IdentifiedElement} params.element
+ * @param {AbstractCustomMap} params.map
+ * @param {function|function[]} [params.onClick]
+ * @constructor
*/
function AbstractMarker(params) {
var self = this;
@@ -17,8 +22,10 @@ function AbstractMarker(params) {
ObjectWithListeners.call(this);
self._icons = [];
+ if (params.element.getIcon()) {
+ self._icons.push(params.element.getIcon());
+ }
self.setIdentifiedElement(params.element);
- self.setIcon(params.element.getIcon());
self.setCustomMap(params.map);
self.registerListenerType("onClick");
@@ -40,7 +47,7 @@ AbstractMarker.prototype.constructor = AbstractMarker;
/**
* Returns identifier of this object.
*
- * @returns identifier of this object
+ * @returns {number|string} identifier of this object
*/
AbstractMarker.prototype.getId = function () {
return this.getIdentifiedElement().getId();
@@ -49,7 +56,7 @@ AbstractMarker.prototype.getId = function () {
/**
* Returns icon of the marker.
*
- * @returns string/undefined identifying icon of the marker
+ * @returns {string|undefined} identifying icon of the marker
*/
AbstractMarker.prototype.getIcon = function () {
var icons = this._icons;
@@ -70,21 +77,32 @@ AbstractMarker.prototype.getIcon = function () {
}
};
+/**
+ *
+ * @returns {Promise}
+ * @private
+ */
AbstractMarker.prototype._updateIcon = function () {
var self = this;
- var googleMarker = self.getGoogleMarker();
- if (googleMarker !== undefined) {
+ var marker = self.getMarker();
+ if (marker !== undefined) {
if (self.getIcon() === undefined) {
- self.hide();
+ return self.hide();
} else {
- googleMarker.setIcon(GuiConnector.getImgPrefix() + self.getIcon());
- if (googleMarker.getMap() === null || googleMarker.getMap() === undefined) {
- self.show();
+ marker.setIcon(GuiConnector.getImgPrefix() + self.getIcon());
+ if (!marker.isShown()) {
+ return self.show();
}
}
}
+ return Promise.resolve();
};
+/**
+ *
+ * @param {string|null|undefined} icon
+ * @returns {Promise}
+ */
AbstractMarker.prototype.setIcon = function (icon) {
var self = this;
if (icon === null || icon === undefined) {
@@ -92,35 +110,66 @@ AbstractMarker.prototype.setIcon = function (icon) {
} else {
self._icons = [icon];
}
- self._updateIcon(self);
+ return self._updateIcon();
};
+/**
+ *
+ * @param {string[]} icons
+ * @returns {Promise}
+ */
AbstractMarker.prototype.setIcons = function (icons) {
var self = this;
self._icons = icons;
- self._updateIcon(self);
+ return self._updateIcon();
};
+/**
+ *
+ * @param {string} icon
+ * @returns {Promise}
+ */
AbstractMarker.prototype.addIcon = function (icon) {
var self = this;
self._icons.push(icon);
- self._updateIcon(self);
+ return self._updateIcon();
};
+
+/**
+ *
+ * @param {string[]} icons
+ * @returns {Promise}
+ */
AbstractMarker.prototype.addIcons = function (icons) {
var self = this;
for (var i = 0; i < icons.length; i++) {
self._icons.push(icons[i]);
}
- self._updateIcon(self);
+ return self._updateIcon();
};
+
+/**
+ *
+ * @param {string[]} icons
+ * @returns {Promise}
+ */
AbstractMarker.prototype.removeIcons = function (icons) {
var self = this;
+ var promises = [];
for (var i = 0; i < icons.length; i++) {
- self.removeIcon(icons[i], true);
+ promises.push(self.removeIcon(icons[i], true));
}
- self._updateIcon(self);
+ return Promise.all(promises).then(function () {
+ return self._updateIcon();
+ });
};
+/**
+ *
+ * @param {string} icon
+ * @param {boolean} [preventMarkerUpdate]
+ * @returns {Promise}
+ */
AbstractMarker.prototype.removeIcon = function (icon, preventMarkerUpdate) {
var self = this;
var index = self._icons.indexOf(icon);
@@ -128,113 +177,114 @@ AbstractMarker.prototype.removeIcon = function (icon, preventMarkerUpdate) {
if (index > -1) {
self._icons.splice(index, 1);
if (!preventMarkerUpdate) {
- self._updateIcon(self);
+ return self._updateIcon();
}
} else {
- logger.warn("Unknown icon for marker: ", icon);
+ logger.warn("Unknown icon for marker: " + icon);
}
+ return Promise.resolve();
};
/**
* Shows marker on the map.
+ *
+ * @returns {Promise}
*/
AbstractMarker.prototype.show = function () {
- if (this.getGoogleMarker() === undefined) {
- logger.warn("Cannot show marker. Marker not initialized");
- return;
- }
- if (this.getGoogleMarker().getMap() !== undefined && this.getGoogleMarker().getMap() !== null) {
- logger.warn("Marker is already shown");
+ var self = this;
+ if (this.getMarker() === undefined) {
+ return this.init().then(function () {
+ return self.getMarker().show();
+ });
} else {
- this.getGoogleMarker().setMap(this.getCustomMap().getGoogleMap());
+ return this.getMarker().show();
}
};
+
+/**
+ *
+ * @returns {Promise}
+ */
AbstractMarker.prototype.hide = function () {
- if (this.getGoogleMarker() === undefined) {
- logger.warn("Cannot hide marker. Marker not initialized");
- return;
- }
- if (this.getGoogleMarker().getMap() === null || this.getGoogleMarker().getMap() === undefined) {
- logger.warn("Marker is already invisible");
+ var self = this;
+ if (this.getMarker() === undefined) {
+ return this.init().then(function () {
+ return self.getMarker().hide();
+ });
} else {
- this.getGoogleMarker().setMap(null);
+ return Promise.resolve(this.getMarker().hide());
}
};
+/**
+ *
+ * @returns {boolean}
+ */
AbstractMarker.prototype.isShown = function () {
- if (this.getGoogleMarker() === undefined) {
+ if (this.getMarker() === undefined) {
return false;
}
- return (this.getGoogleMarker().getMap() !== undefined && this.getGoogleMarker().getMap() !== null);
+ return this.getMarker().isShown();
};
/**
* Returns {@link AbstractCustomMap} where marker is located.
*
- * @returns AbstractCustomMap where marker is located
+ * @returns {AbstractCustomMap} where marker is located
*/
AbstractMarker.prototype.getCustomMap = function () {
return this._map;
};
+/**
+ *
+ * @param {AbstractCustomMap} map
+ */
AbstractMarker.prototype.setCustomMap = function (map) {
this._map = map;
};
/**
- * Returns google.maps.LatLngBounds of the marker (it's a single point).
+ * Returns {Bounds} of the marker (it's a single point).
*
- * @returns google.maps.LatLngBounds bounds of the marker (it's a single point)
+ * @returns {Bounds|null} bounds of the marker (it's a single point)
*/
AbstractMarker.prototype.getBounds = function () {
- var marker = this.getGoogleMarker();
+ var marker = this.getMarker();
if (marker === undefined || marker === null) {
logger.warn("Marker not initialized");
return null;
}
- var bounds = new google.maps.LatLngBounds();
- bounds.extend(marker.position);
- return bounds;
+ return marker.getBounds();
};
/**
- * Set map where the marker should be visualized.
+ * Initializes {@link Marker} object connected to this object.
*
- * @param map
- * {@link google.maps.Map} where the marker should be visualized.
- */
-AbstractMarker.prototype.setMap = function (map) {
- if (this.getGoogleMarker() !== undefined) {
- this.getGoogleMarker().setMap(map);
- } else {
- logger.warn("[" + this.constructor.name + "] Cannot setup map. Marker wasn't initialized. Marker id: "
- + this.getId());
- }
-};
-
-/**
- * Initializes google.maps.Marker object connected to this object.
+ * @returns {Promise}
+ * @protected
*/
AbstractMarker.prototype._init = function () {
var self = this;
var point = this.getCoordinates();
- var latLng = this.getCustomMap().fromPointToLatLng(point);
- this._marker = new google.maps.Marker({
- position: latLng,
+ this._marker = this.getCustomMap().getMapCanvas().createMarker({
+ position: point,
icon: GuiConnector.getImgPrefix() + self.getIcon(),
- optimized: self.getCustomMap().isMarkerOptimization(),
id: self.getId()
});
- var onclick = function () {
+ this._marker.addListener('click', function () {
return self.onClickHandler().then(null, GuiConnector.alert);
- };
- google.maps.event.addListener(this.getGoogleMarker(), 'click', onclick);
+ });
return Promise.resolve();
};
+/**
+ *
+ * @returns {Promise|PromiseLike}
+ */
AbstractMarker.prototype.onClickHandler = function () {
return this.callListeners("onClick");
};
@@ -242,29 +292,41 @@ AbstractMarker.prototype.onClickHandler = function () {
/**
* Returns {google.maps.Marker} connected to this object.
*
- * @returns {google.maps.Marker} connected to this object
+ * @returns {Marker} connected to this object
*/
-AbstractMarker.prototype.getGoogleMarker = function () {
+AbstractMarker.prototype.getMarker = function () {
return this._marker;
};
/**
* Abstract function returning string marker type.
*
- * @returns string marker type
+ * @returns {string} marker type
*/
AbstractMarker.prototype.getType = function () {
return this.getIdentifiedElement().getType();
};
+/**
+ *
+ * @returns {number}
+ */
AbstractMarker.prototype.getModelId = function () {
return this.getIdentifiedElement().getModelId();
};
+/**
+ *
+ * @returns {IdentifiedElement}
+ */
AbstractMarker.prototype.getIdentifiedElement = function () {
return this._identifiedElement;
};
+/**
+ *
+ * @param {IdentifiedElement} identifiedElement
+ */
AbstractMarker.prototype.setIdentifiedElement = function (identifiedElement) {
this._identifiedElement = identifiedElement;
};
diff --git a/frontend-js/src/main/js/map/marker/AliasMarker.js b/frontend-js/src/main/js/map/marker/AliasMarker.js
index a74a1a7bac3e04a3d78c6bf2297b60ace970ee48..7186290000c78c821ad50fef9ae0d7634033505e 100644
--- a/frontend-js/src/main/js/map/marker/AliasMarker.js
+++ b/frontend-js/src/main/js/map/marker/AliasMarker.js
@@ -1,12 +1,20 @@
"use strict";
var AbstractMarker = require('./AbstractMarker');
+var Point = require('../canvas/Point');
+// noinspection JSUnusedLocalSymbols
var logger = require('../../logger');
/**
* This class describes Google maps marker (connected to {@link Alias}) that is
* visualized on the map.
+ *
+ * @param {IdentifiedElement} params.element
+ * @param {AbstractCustomMap} params.map
+ * @param {function|function[]} [params.onClick]
+ * @constructor
+ * @extends AbstractMarker
*/
function AliasMarker(params) {
AbstractMarker.call(this, params);
@@ -18,7 +26,7 @@ AliasMarker.prototype.constructor = AliasMarker;
/**
* Returns {@link Alias} data for this marker.
*
- * @returns {@link Alias} data for this marker
+ * @returns {Alias} data for this marker
*/
AliasMarker.prototype.getAliasData = function () {
return this._aliasData;
@@ -27,8 +35,8 @@ AliasMarker.prototype.getAliasData = function () {
/**
* Sets {@link Alias} data for this marker.
*
- * @param data
- * {@link Alias} data for this marker
+ * @param {Alias} data
+ * data for this marker
*/
AliasMarker.prototype.setAliasData = function (data) {
this._aliasData = data;
@@ -37,11 +45,11 @@ AliasMarker.prototype.setAliasData = function (data) {
/**
* Returns coordinates where marker is pointing.
*
- * @returns {google.maps.Point} - coordinates where marker is pointing
+ * @returns {Point} - coordinates where marker is pointing
*/
AliasMarker.prototype.getCoordinates = function () {
var alias = this.getAliasData();
- return new google.maps.Point(alias.getX() + alias.getWidth() / 2, alias.getY() + alias.getHeight() / 2);
+ return new Point(alias.getX() + alias.getWidth() / 2, alias.getY() + alias.getHeight() / 2);
};
AliasMarker.prototype.init = function () {
@@ -51,7 +59,7 @@ AliasMarker.prototype.init = function () {
self.setAliasData(aliasData);
return self._init();
}).then(function () {
- self.show();
+ return self.show();
});
};
diff --git a/frontend-js/src/main/js/map/marker/MarkerSurfaceCollection.js b/frontend-js/src/main/js/map/marker/MarkerSurfaceCollection.js
index ee90140c9c3c3eb58dc21e8ee6a23c19d8fa895f..5ecac222035e50ca0a651b3284e545ba702535c1 100644
--- a/frontend-js/src/main/js/map/marker/MarkerSurfaceCollection.js
+++ b/frontend-js/src/main/js/map/marker/MarkerSurfaceCollection.js
@@ -15,12 +15,28 @@ var Promise = require("bluebird");
var ObjectWithListeners = require('../../ObjectWithListeners');
+/**
+ * @typedef {Object} IconData
+ * @property {IdentifiedElement} element
+ * @property {string[]} icons
+ */
+
+/**
+ *
+ * @param {AbstractCustomMap} params.map
+ * @constructor
+ */
function MarkerSurfaceCollection(params) {
var self = this;
ObjectWithListeners.call(this);
+ /**
+ * @type {Object.<string, IconData>}
+ */
self._overlayIcons = {};
+ // @type {Object.<string, AbstractMarker>}
self._markers = {};
+ // @type {Object.<string, Object.<string,AbstractMarker>>}
self._overlaySurfaces = {
ALIAS: [],
REACTION: [],
@@ -33,6 +49,10 @@ function MarkerSurfaceCollection(params) {
MarkerSurfaceCollection.prototype = Object.create(ObjectWithListeners.prototype);
MarkerSurfaceCollection.prototype.constructor = MarkerSurfaceCollection;
+/**
+ *
+ * @param {AbstractCustomMap} map
+ */
MarkerSurfaceCollection.prototype.setMap = function (map) {
if (map === undefined) {
throw new Error("Map must be defined");
@@ -40,22 +60,53 @@ MarkerSurfaceCollection.prototype.setMap = function (map) {
this._map = map;
};
+/**
+ *
+ * @returns {AbstractCustomMap}
+ */
MarkerSurfaceCollection.prototype.getMap = function () {
return this._map;
};
+/**
+ *
+ * @param {AbstractDbOverlay} overlay
+ * @returns {Promise}
+ */
MarkerSurfaceCollection.prototype.refreshOverlayMarkers = function (overlay) {
+ var promises = [];
var self = this;
var overlayData = self._overlayIcons[overlay.getName()];
for (var elementId in overlayData) {
if (overlayData.hasOwnProperty(elementId)) {
- var marker = self._markers[elementId];
- marker.hide();
- marker.show();
+ var x = function () {
+ var marker = self._markers[elementId];
+ promises.push(marker.hide().then(function () {
+ return marker.show();
+ }));
+ }();
}
}
+ overlayData = self._overlaySurfaces[overlay.getName()];
+ for (elementId in overlayData) {
+ if (overlayData.hasOwnProperty(elementId)) {
+ x = function () {
+ var surface = overlayData[elementId];
+ promises.push(surface.hide().then(function () {
+ return surface.show();
+ }));
+ }();
+ }
+ }
+ return Promise.all(promises);
};
+/**
+ *
+ * @param {string[]} params.icons
+ * @param {IdentifiedElement} params.element
+ * @returns {Promise}
+ */
MarkerSurfaceCollection.prototype.addMarker = function (params) {
var element = params.element;
var icons = params.icons;
@@ -64,8 +115,9 @@ MarkerSurfaceCollection.prototype.addMarker = function (params) {
var result = self.getMarker(element);
if (result !== undefined) {
- result.addIcons(icons);
- return Promise.resolve(result);
+ return result.addIcons(icons).then(function () {
+ return Promise.resolve(result);
+ });
}
var MarkerConstructor = null;
@@ -82,18 +134,29 @@ MarkerSurfaceCollection.prototype.addMarker = function (params) {
element: element,
map: self.getMap(),
onClick: [function () {
- return self.getMap().getTopMap()._openInfoWindowForIdentifiedElement(element, result.getGoogleMarker());
+ return self.getMap()._openInfoWindowForIdentifiedElement(element, result.getMarker());
}, function () {
return self.getMap().getTopMap().callListeners("onBioEntityClick", element);
}]
});
- result.setIcons(icons);
- return result.init().then(function () {
- self.putMarker(element, result);
- return result;
+ self.putMarker(element, result);
+ return result.setIcons(icons).then(function () {
+ if (self.getMap().isInitialized()) {
+ return result.init().then(function () {
+ return result;
+ });
+ } else {
+ return Promise.resolve(result);
+ }
});
};
+/**
+ *
+ * @param {string[]} params.icons
+ * @param {IdentifiedElement} params.element
+ * @returns {Promise}
+ */
MarkerSurfaceCollection.prototype.removeMarker = function (params) {
var element = params.element;
var icons = params.icons;
@@ -101,10 +164,15 @@ MarkerSurfaceCollection.prototype.removeMarker = function (params) {
var self = this;
var result = self.getMarker(element);
- result.removeIcons(icons);
+ return result.removeIcons(icons);
};
-
+/**
+ *
+ * @param {IdentifiedElement} element
+ * @param {AbstractDbOverlay} dbOverlay
+ * @returns {PromiseLike<any>}
+ */
MarkerSurfaceCollection.prototype.createSurfaceForDbOverlay = function (element, dbOverlay) {
var self = this;
@@ -115,44 +183,69 @@ MarkerSurfaceCollection.prototype.createSurfaceForDbOverlay = function (element,
}
var map = self.getMap();
+ /**
+ * @type {function[]}
+ */
var onclickFunctions = [function () {
- return self.getMap().getTopMap().openInfoWindowForIdentifiedElement(element, result.getGoogleMarker());
- }, function () {
return self.getMap().getTopMap().callListeners("onBioEntityClick", element);
}];
if (element.getType() === "ALIAS") {
- return AliasSurface.createFromIdentifiedElement({
- element: element,
- map: map,
- onClick: onclickFunctions
- }).then(function (surface) {
- result = surface;
+ return map.getModel().getAliasById(element.getId()).then(function (alias) {
+ result = new AliasSurface({
+ alias: alias,
+ map: map,
+ onClick: onclickFunctions,
+ color: element.getColor(),
+ fillOpacity: element.getOpacity(),
+ strokeWeight: element.getLineWeight(),
+ strokeColor: element.getLineColor(),
+ strokeOpacity: element.getLineOpacity()
+ });
self.putSurface({element: element, overlay: dbOverlay}, result);
- return result;
+ if (self.getMap().isInitialized()) {
+ return result.init().then(function () {
+ return result.show();
+ }).then(function () {
+ return result;
+ });
+ } else {
+ return result;
+ }
});
} else if (element.getType() === "REACTION") {
return map.getModel().getReactionById(element.getId()).then(function (reactionData) {
- return ReactionSurface.create({
+ result = new ReactionSurface({
reaction: reactionData,
map: map,
customized: true,
color: element.getColor(),
onClick: onclickFunctions
- }).then(function (surface) {
- result = surface;
- result.show();
- self.putSurface({element: element, overlay: dbOverlay}, result);
- return result;
});
+ result.addListener("onClick", function(){
+ return map.getTopMap().openInfoWindowForIdentifiedElement(element);
+ });
+ self.putSurface({element: element, overlay: dbOverlay}, result);
+ if (self.getMap().isInitialized()) {
+ return result.init().then(function () {
+ return result.show();
+ }).then(function () {
+ return result;
+ });
+ } else {
+ return result;
+ }
});
} else if (element.getType() === "POINT") {
throw new Error("Not implemented");
} else {
- throw new Error("Unknown type of the element in overlay: " + element.type);
+ throw new Error("Unknown type of the element in overlay: " + element.getType());
}
};
-
+/**
+ *
+ * @returns {AbstractMarker[]}
+ */
MarkerSurfaceCollection.prototype.getMarkers = function () {
var result = [];
var markers = this._markers;
@@ -167,6 +260,11 @@ MarkerSurfaceCollection.prototype.getMarkers = function () {
return result;
};
+
+/**
+ *
+ * @returns {AbstractSurfaceElement[]}
+ */
MarkerSurfaceCollection.prototype.getSurfaces = function () {
var result = [];
@@ -185,14 +283,29 @@ MarkerSurfaceCollection.prototype.getSurfaces = function () {
return result;
};
+/**
+ *
+ * @param {IdentifiedElement} element
+ * @returns {AbstractMarker|undefined}
+ */
MarkerSurfaceCollection.prototype.getMarker = function (element) {
- return this._markers[new IdentifiedElement(element).toString()];
+ return this._markers[element.toString()];
};
+/**
+ *
+ * @param {IdentifiedElement} element
+ * @param {AbstractMarker} marker
+ */
MarkerSurfaceCollection.prototype.putMarker = function (element, marker) {
- this._markers[new IdentifiedElement(element).toString()] = marker;
+ this._markers[element.toString()] = marker;
};
+/**
+ *
+ * @param params
+ * @returns {AbstractSurfaceElement|undefined}
+ */
MarkerSurfaceCollection.prototype.getSurface = function (params) {
var element = new IdentifiedElement(params.element);
var overlay = params.overlay;
@@ -205,8 +318,15 @@ MarkerSurfaceCollection.prototype.getSurface = function (params) {
return overlaySurfaces[element.toString()];
};
+/**
+ *
+ * @param {Object} params
+ * @param {IdentifiedElement} params.element
+ * @param {AbstractDbOverlay} params.overlay
+ * @param {AbstractSurfaceElement} surface
+ */
MarkerSurfaceCollection.prototype.putSurface = function (params, surface) {
- var element = new IdentifiedElement(params.element);
+ var element = params.element;
var overlay = params.overlay;
var overlaySurfaces = this._overlaySurfaces[overlay.getName()];
@@ -217,6 +337,11 @@ MarkerSurfaceCollection.prototype.putSurface = function (params, surface) {
overlaySurfaces[element.toString()] = surface;
};
+/**
+ *
+ * @param {AbstractSurfaceElement[]} modifiedMarkersAndSurfaces
+ * @param {AbstractDbOverlay} dbOverlay
+ */
MarkerSurfaceCollection.prototype.removeUnmodifiedSurfaces = function (modifiedMarkersAndSurfaces, dbOverlay) {
var modifiedSurfaces = {
"ALIAS": [],
@@ -238,13 +363,19 @@ MarkerSurfaceCollection.prototype.removeUnmodifiedSurfaces = function (modifiedM
for (var key in surfaceOverlaysPerType) {
if (surfaceOverlaysPerType.hasOwnProperty(key)) {
if (!modifiedSurfaces[key]) {
- surfaceOverlaysPerType[key].setMap(null);
+ surfaceOverlaysPerType[key].hide();
delete surfaceOverlaysPerType[key];
}
}
}
};
+/**
+ *
+ * @param {IdentifiedElement[]} allElements
+ * @param {AbstractDbOverlay} overlay
+ * @returns {PromiseLike<any>}
+ */
MarkerSurfaceCollection.prototype.renderOverlay = function (allElements, overlay) {
var self = this;
var markerElements = [];
@@ -267,15 +398,23 @@ MarkerSurfaceCollection.prototype.renderOverlay = function (allElements, overlay
}).then(function (surfaces) {
return markers.concat(surfaces);
});
-
};
+/**
+ *
+ * @param {IdentifiedElement} element
+ * @constructor
+ */
function IconDifference(element) {
this.element = element;
this.iconsToAdd = [];
this.iconsToRemove = [];
}
+/**
+ *
+ * @param {string} icon
+ */
IconDifference.prototype.addIcon = function (icon) {
var index = this.iconsToRemove.indexOf(icon);
if (index > -1) {
@@ -284,6 +423,11 @@ IconDifference.prototype.addIcon = function (icon) {
this.iconsToAdd.push(icon);
}
};
+
+/**
+ *
+ * @param {string} icon
+ */
IconDifference.prototype.removeIcon = function (icon) {
var index = this.iconsToAdd.indexOf(icon);
if (index > -1) {
@@ -292,12 +436,23 @@ IconDifference.prototype.removeIcon = function (icon) {
this.iconsToRemove.push(icon);
}
};
+
+/**
+ *
+ * @param {string[]} icons
+ */
IconDifference.prototype.removeIcons = function (icons) {
for (var i = 0; i < icons.length; i++) {
this.removeIcon(icons[i]);
}
};
+/**
+ *
+ * @param {IdentifiedElement[]} elements
+ * @param {AbstractDbOverlay} overlay
+ * @returns {PromiseLike<any>}
+ */
MarkerSurfaceCollection.prototype.renderOverlayMarkers = function (elements, overlay) {
var self = this;
@@ -351,7 +506,11 @@ MarkerSurfaceCollection.prototype.renderOverlayMarkers = function (elements, ove
});
};
-
+/**
+ *
+ * @param {AbstractDbOverlay} overlay
+ * @returns {IconData}
+ */
MarkerSurfaceCollection.prototype.getOverlayIconData = function (overlay) {
var iconData = this._overlayIcons[overlay.getName()];
if (iconData === undefined) {
@@ -361,6 +520,11 @@ MarkerSurfaceCollection.prototype.getOverlayIconData = function (overlay) {
return iconData;
};
+/**
+ *
+ * @param {IdentifiedElement[]} elements
+ * @param {AbstractDbOverlay} overlay
+ */
MarkerSurfaceCollection.prototype.createOverlayIconData = function (elements, overlay) {
var iconData = {};
for (var i = 0; i < elements.length; i++) {
@@ -373,6 +537,12 @@ MarkerSurfaceCollection.prototype.createOverlayIconData = function (elements, ov
this._overlayIcons[overlay.getName()] = iconData;
};
+/**
+ *
+ * @param {IdentifiedElement[]} elements
+ * @param {AbstractDbOverlay} overlay
+ * @returns {PromiseLike<AbstractSurfaceElement>}
+ */
MarkerSurfaceCollection.prototype.renderOverlaySurfaces = function (elements, overlay) {
var self = this;
var surfaces = [];
diff --git a/frontend-js/src/main/js/map/marker/PointMarker.js b/frontend-js/src/main/js/map/marker/PointMarker.js
index 80bca73f838ea67f2a1b17cdeeca5983b7157dbc..63decdbe6674bb7f10a6e20f5a6fbc5e74d87a50 100644
--- a/frontend-js/src/main/js/map/marker/PointMarker.js
+++ b/frontend-js/src/main/js/map/marker/PointMarker.js
@@ -6,45 +6,64 @@ var PointData = require('../data/PointData');
/**
* This class describes Google maps marker (connected to some specific point,
* but not to any element) that is visualized on the map.
+ *
+ * @param {IdentifiedElement} params.element
+ * @param {AbstractCustomMap} params.map
+ * @param {function|function[]} params.onclick
+ * @constructor
+ * @extends AbstractMarker
*/
function PointMarker(params) {
var self = this;
AbstractMarker.call(self, params);
self.setPointData(new PointData(self.getIdentifiedElement()));
}
+
PointMarker.prototype = Object.create(AbstractMarker.prototype);
PointMarker.prototype.constructor = PointMarker;
-PointMarker.prototype.init = function() {
+/**
+ *
+ * @returns {Promise<any>}
+ */
+PointMarker.prototype.init = function () {
var self = this;
- return self._init().then(function() {
- self.show();
+ return self._init().then(function () {
+ return self.show();
});
};
/**
* Returns identifier of the object.
- *
- * @returns identifier of the object
+ *
+ * @returns {string} identifier of the object
*/
-PointMarker.prototype.getId = function() {
+PointMarker.prototype.getId = function () {
return this.getPointData().getId();
};
/**
* Returns a {@link PointData} that is connected to this marker.
- *
- * @returns a {@link PointData} that is connected to this marker
+ *
+ * @returns {PointData} that is connected to this marker
*/
-PointMarker.prototype.getPointData = function() {
+PointMarker.prototype.getPointData = function () {
return this._pointData;
};
-PointMarker.prototype.setPointData = function(pointData) {
+/**
+ *
+ * @param {PointData} pointData
+ */
+PointMarker.prototype.setPointData = function (pointData) {
this._pointData = pointData;
};
-PointMarker.prototype.getCoordinates = function() {
+/**
+ *
+ * @returns {Point}
+ */
+PointMarker.prototype.getCoordinates = function () {
return this._pointData.getPoint();
};
diff --git a/frontend-js/src/main/js/map/marker/ReactionMarker.js b/frontend-js/src/main/js/map/marker/ReactionMarker.js
index 4ebe4248a952e04dc2f7bbc47cba512ed4877f9e..d7c793a7c81c03d5550202fc0a10a95f05155d38 100644
--- a/frontend-js/src/main/js/map/marker/ReactionMarker.js
+++ b/frontend-js/src/main/js/map/marker/ReactionMarker.js
@@ -1,53 +1,65 @@
"use strict";
var AbstractMarker = require('./AbstractMarker');
+var Point = require('../canvas/Point');
/**
* This class describes Google maps marker (connected to {@link Reaction}) that
* is visualized on the map.
+ *
+ * @param {IdentifiedElement} params.element
+ * @param {AbstractCustomMap} params.map
+ * @param {function|function[]} params.onclick
+ * @constructor
+ * @extends AbstractMarker
*/
function ReactionMarker(params) {
AbstractMarker.call(this, params);
}
+
ReactionMarker.prototype = Object.create(AbstractMarker.prototype);
ReactionMarker.prototype.constructor = ReactionMarker;
-ReactionMarker.prototype.init = function() {
+/**
+ *
+ * @returns {PromiseLike<any>}
+ */
+ReactionMarker.prototype.init = function () {
var self = this;
- return self.getCustomMap().getModel().getReactionById(self.getId()).then(function(reactionData) {
+ return self.getCustomMap().getModel().getReactionById(self.getId()).then(function (reactionData) {
self.setReactionData(reactionData);
return self._init();
- }).then(function() {
- self.show();
+ }).then(function () {
+ return self.show();
});
};
/**
* Returns {@link Reaction} data for this marker.
- *
- * @returns {@link Reaction} data for this marker
+ *
+ * @returns {Reaction} data for this marker
*/
-ReactionMarker.prototype.getReactionData = function() {
+ReactionMarker.prototype.getReactionData = function () {
return this._reactionData;
};
/**
* Sets {@link Reaction} data for this marker.
- *
- * @param data
- * {@link Reaction} data for this marker
+ *
+ * @param {Reaction} data
+ * data for this marker
*/
-ReactionMarker.prototype.setReactionData = function(data) {
+ReactionMarker.prototype.setReactionData = function (data) {
this._reactionData = data;
};
/**
* Returns coordinates where marker is pointing.
- *
- * @returns {google.maps.Point} - coordinates where marker is pointing
+ *
+ * @returns {Point} - coordinates where marker is pointing
*/
-ReactionMarker.prototype.getCoordinates = function() {
- return new google.maps.Point(this._reactionData.getCenter().x, this._reactionData.getCenter().y);
+ReactionMarker.prototype.getCoordinates = function () {
+ return new Point(this._reactionData.getCenter().x, this._reactionData.getCenter().y);
};
module.exports = ReactionMarker;
diff --git a/frontend-js/src/main/js/map/overlay/AbstractDbOverlay.js b/frontend-js/src/main/js/map/overlay/AbstractDbOverlay.js
index 219eacbaf759ee1395bfff4e136a69317c696317..8c92adff938335911b0c4ac0c2a717bd0db2b639 100644
--- a/frontend-js/src/main/js/map/overlay/AbstractDbOverlay.js
+++ b/frontend-js/src/main/js/map/overlay/AbstractDbOverlay.js
@@ -9,6 +9,7 @@ var Promise = require("bluebird");
var IdentifiedElement = require('../data/IdentifiedElement');
var ObjectWithListeners = require('../../ObjectWithListeners');
+var Point= require('../canvas/Point');
var ServerConnector = require('../../ServerConnector');
@@ -36,6 +37,13 @@ function AbstractDbOverlay(params) {
this.registerListenerType('onTargetVisibilityChange');
this.setQueries([]);
+
+ this.mapOverlays = {
+ ALIAS: [],
+ REACTION: [],
+ POINT: []
+ };
+
}
AbstractDbOverlay.prototype = Object.create(ObjectWithListeners.prototype);
@@ -170,11 +178,19 @@ AbstractDbOverlay.prototype.createIdentifiedElementsForTargetingClass = function
return result;
};
+/**
+ * @returns {PromiseLike}
+ */
AbstractDbOverlay.prototype.refresh = function () {
throw new Error("Refreshing shouldn't be called");
};
-AbstractDbOverlay.prototype.searchByTarget = function () {
+/**
+ *
+ * @param {IdentifiedElement} element
+ * @returns {Promise}
+ */
+AbstractDbOverlay.prototype.searchByTarget = function (element) {
throw new Error("Not implemented");
};
@@ -186,7 +202,7 @@ AbstractDbOverlay.prototype.searchByEncodedQuery = function (originalQuery, fitB
} else if (query.type === AbstractDbOverlay.QueryType.SEARCH_BY_TARGET) {
return this.searchByTarget(new IdentifiedElement(query.target));
} else if (query.type === AbstractDbOverlay.QueryType.SEARCH_BY_COORDINATES) {
- query.coordinates = new google.maps.Point(query.coordinates.x, query.coordinates.y);
+ query.coordinates = new Point(query.coordinates.x, query.coordinates.y);
return this.searchByCoordinates(query);
} else {
throw new Error("Unknown type of query: " + query.type);
@@ -207,10 +223,6 @@ AbstractDbOverlay.prototype.allowGeneralSearch = function () {
return this._allowGeneralSearch;
};
-AbstractDbOverlay.prototype.getName = function () {
- return this.name;
-};
-
/**
* Returns true if overlay allows to get data for element by search id.
*/
diff --git a/frontend-js/src/main/js/map/overlay/AbstractTargettingDbOverlay.js b/frontend-js/src/main/js/map/overlay/AbstractTargettingDbOverlay.js
index 5fda2343e12059f521bc141267d01d1e07c3f502..50540c08d777d15b6e3e2075b3e7b1b54e5efd16 100644
--- a/frontend-js/src/main/js/map/overlay/AbstractTargettingDbOverlay.js
+++ b/frontend-js/src/main/js/map/overlay/AbstractTargettingDbOverlay.js
@@ -111,6 +111,11 @@ AbstractTargettingDbOverlay.prototype.getIdentifiedElements = function () {
});
};
+/**
+ *
+ * @param {IdentifiedElement} element
+ * @returns {Promise}
+ */
AbstractTargettingDbOverlay.prototype.searchByTarget = function (element) {
return this.searchNamesByTarget(element);
};
diff --git a/frontend-js/src/main/js/map/overlay/CommentDbOverlay.js b/frontend-js/src/main/js/map/overlay/CommentDbOverlay.js
index 7364c1e1e42631b56eab591cd0ff8d1b1e5bbdb4..4c86c71aa82e99c614a9739745550451bbc43f9f 100644
--- a/frontend-js/src/main/js/map/overlay/CommentDbOverlay.js
+++ b/frontend-js/src/main/js/map/overlay/CommentDbOverlay.js
@@ -54,12 +54,12 @@ CommentDbOverlay.prototype.getDetailDataByIdentifiedElement = function(element)
} else {
var coordinates;
if (element.getType() === "POINT") {
- coordinates = element.getPoint().x + "," + element.getPoint().y;
+ coordinates = element.getPoint().x.toFixed(2) + "," + element.getPoint().y.toFixed(2);
}
return ServerConnector.getComments({
elementId : element.getId(),
elementType : element.getType(),
- coordinates : coordinates,
+ coordinates : coordinates
}).then(function(comments) {
self._detailDataByIdentifiedElement[elementKey] = comments;
return comments;
diff --git a/frontend-js/src/main/js/map/overlay/DbOverlayCollection.js b/frontend-js/src/main/js/map/overlay/DbOverlayCollection.js
index 5b1111971cc110275a58cfb8fec574b930032ce7..e98f689b21ec0ff72b5b2eef195b8f8119f93f6c 100644
--- a/frontend-js/src/main/js/map/overlay/DbOverlayCollection.js
+++ b/frontend-js/src/main/js/map/overlay/DbOverlayCollection.js
@@ -35,7 +35,7 @@ function DbOverlayCollection(params) {
name : "comment",
allowSearchById : false,
allowGeneralSearch : true
- }, ];
+ } ];
var map = params.map;
diff --git a/frontend-js/src/main/js/map/overlay/SearchDbOverlay.js b/frontend-js/src/main/js/map/overlay/SearchDbOverlay.js
index 05a8fdee9741645368fb82d2895af194b2aa360f..5f199aad9f22cb3dd89a040d47c0f3b0738a8d38 100644
--- a/frontend-js/src/main/js/map/overlay/SearchDbOverlay.js
+++ b/frontend-js/src/main/js/map/overlay/SearchDbOverlay.js
@@ -16,6 +16,12 @@ var SearchBioEntityGroup = require('../data/SearchBioEntityGroup');
var ServerConnector = require('../../ServerConnector');
+/**
+ *
+ * @param params
+ * @constructor
+ * @extends AbstractDbOverlay
+ */
function SearchDbOverlay(params) {
params.iconType = "marker";
params.iconColorStart = 0;
@@ -257,6 +263,11 @@ SearchDbOverlay.prototype.searchBySingleQuery = function (originalQuery, perfect
}
};
+/**
+ *
+ * @param {IdentifiedElement} element
+ * @returns {Promise|PromiseLike}
+ */
SearchDbOverlay.prototype.searchByTarget = function (element) {
var self = this;
var query = self.encodeQuery(AbstractDbOverlay.QueryType.SEARCH_BY_TARGET, element);
@@ -266,7 +277,7 @@ SearchDbOverlay.prototype.searchByTarget = function (element) {
if (self._elementsByQuery[query] === undefined) {
self._elementsByQuery[query] = [element];
}
- return self.getMap().fetchIdentifiedElements(element, true).then(function () {
+ return self.getMap().fetchIdentifiedElements([element], true).then(function () {
self.setQueries([query]);
return self.callListeners('onSearch', {
fitBounds: false,
@@ -276,7 +287,6 @@ SearchDbOverlay.prototype.searchByTarget = function (element) {
}).then(function () {
return Promise.resolve(self._elementsByQuery[query]);
});
-
};
@@ -287,7 +297,7 @@ SearchDbOverlay.prototype.getIdentifiedElements = function () {
return Promise.each(queries, function (query, index) {
var identifiedElements = self._elementsByQuery[query];
- return self.getMap().fetchIdentifiedElements(identifiedElements).then(function (elements) {
+ return self.getMap().fetchIdentifiedElements(identifiedElements, true).then(function (elements) {
var iconCounter = 1;
var groups = [];
for (var i = 0; i < elements.length; i++) {
@@ -329,6 +339,11 @@ SearchDbOverlay.prototype.getIdentifiedElements = function () {
});
};
+/**
+ *
+ * @param element
+ * @returns {Promise<BioEntity[]>}
+ */
SearchDbOverlay.prototype.getDetailDataByIdentifiedElement = function (element) {
if (element.getType() === "POINT") {
return Promise.resolve(null);
diff --git a/frontend-js/src/main/js/map/overlay/UserDbOverlay.js b/frontend-js/src/main/js/map/overlay/UserDbOverlay.js
index c78b6c3aace33c669d1b13fe59ac779fceb186f3..f8298eab0302c99b85c5add04a166297ad08594f 100644
--- a/frontend-js/src/main/js/map/overlay/UserDbOverlay.js
+++ b/frontend-js/src/main/js/map/overlay/UserDbOverlay.js
@@ -124,7 +124,7 @@ UserDbOverlay.prototype.addSurface = function (params) {
self.enableAddRemoveElements();
return self.callListeners("onSearch", {
fitBounds: false,
- identifiedElements: elements,
+ identifiedElements: elements
});
}).then(null, function (error) {
self.enableAddRemoveElements();
@@ -151,7 +151,7 @@ UserDbOverlay.prototype.removeMarker = function (params) {
self.enableAddRemoveElements();
return self.callListeners("onSearch", {
fitBounds: false,
- identifiedElements: elements,
+ identifiedElements: elements
});
}).then(null, function (error) {
self.enableAddRemoveElements();
@@ -177,7 +177,7 @@ UserDbOverlay.prototype.removeSurface = function (params) {
self.enableAddRemoveElements();
return self.callListeners("onSearch", {
fitBounds: false,
- identifiedElements: elements,
+ identifiedElements: elements
});
}).then(null, function (error) {
self.enableAddRemoveElements();
@@ -241,7 +241,7 @@ UserDbOverlay.prototype.clear = function () {
};
return self.callListeners("onSearch", {
fitBounds: false,
- identifiedElements: [],
+ identifiedElements: []
});
};
diff --git a/frontend-js/src/main/js/map/surface/AbstractSurfaceElement.js b/frontend-js/src/main/js/map/surface/AbstractSurfaceElement.js
index fd58a218b009deaeca57dddefcd4e934880baa29..4e058339ecb3da145ffd68e12a64579818dc171d 100644
--- a/frontend-js/src/main/js/map/surface/AbstractSurfaceElement.js
+++ b/frontend-js/src/main/js/map/surface/AbstractSurfaceElement.js
@@ -2,11 +2,18 @@
var logger = require('../../logger');
+var Bounds = require('../canvas/Bounds');
var ObjectWithListeners = require('../../ObjectWithListeners');
+var Promise = require('bluebird');
/**
* Class representing abstract overlay element on the map relevant for a
* specific overlay.
+ *
+ * @param {IdentifiedElement} params.element
+ * @param {AbstractCustomMap} params.map
+ * @param {function|function[]} params.onClick
+ * @constructor
*/
function AbstractSurfaceElement(params) {
var self = this;
@@ -18,7 +25,7 @@ function AbstractSurfaceElement(params) {
if (params.element !== undefined && params.element !== null) {
self.setIdentifiedElement(params.element);
}
- self._googleMapObjects = [];
+ self._mapCanvasObjects = [];
if (params.onClick !== undefined) {
if (typeof params.onClick !== "function") {
@@ -34,103 +41,155 @@ function AbstractSurfaceElement(params) {
AbstractSurfaceElement.prototype = Object.create(ObjectWithListeners.prototype);
AbstractSurfaceElement.prototype.constructor = AbstractSurfaceElement;
-AbstractSurfaceElement.prototype.setMap = function (map) {
- for (var i = 0; i < this.getGoogleMapObjects().length; i++) {
- this.getGoogleMapObjects()[i].setMap(map);
- }
-};
-
-AbstractSurfaceElement.prototype.getBounds = function () {
- var bounds = new google.maps.LatLngBounds();
- for (var i = 0; i < this.getGoogleMapObjects().length; i++) {
- bounds.extend(this.getGoogleMapObjects()[i].getBounds().getSouthWest());
- bounds.extend(this.getGoogleMapObjects()[i].getBounds().getNorthEast());
- }
- return bounds;
-};
-
+/**
+ *
+ * @returns {boolean}
+ */
AbstractSurfaceElement.prototype.isShown = function () {
var result = false;
- for (var i = 0; i < this.getGoogleMapObjects().length; i++) {
- var map = this.getGoogleMapObjects()[i].getMap();
- if (map !== null && map !== undefined) {
+ for (var i = 0; i < this.getMapCanvasObjects().length; i++) {
+ if (this.getMapCanvasObjects()[i].isShown()) {
result = true;
}
}
-
return result;
};
+/**
+ *
+ * @returns {Promise}
+ */
AbstractSurfaceElement.prototype.show = function () {
+ var self = this;
+ if (!this.isInitialized()) {
+ return this.init().then(function () {
+ return self.show();
+ });
+ }
if (this.isShown()) {
logger.warn("Surface already shown");
- return;
+ return Promise.resolve();
}
- this.setMap(this.getCustomMap().getGoogleMap());
+ var promises = [];
+ for (var i = 0; i < this.getMapCanvasObjects().length; i++) {
+ promises.push(this.getMapCanvasObjects()[i].show());
+ }
+ return Promise.all(promises);
};
+/**
+ *
+ * @returns {boolean}
+ */
+AbstractSurfaceElement.prototype.isInitialized = function () {
+ return this.getMapCanvasObjects().length > 0;
+};
+
+/**
+ *
+ * @returns {Promise}
+ */
AbstractSurfaceElement.prototype.hide = function () {
- this.setMap(null);
+ var promises = [];
+ for (var i = 0; i < this.getMapCanvasObjects().length; i++) {
+ promises.push(this.getMapCanvasObjects()[i].hide());
+ }
+ return Promise.all(promises);
};
+/**
+ *
+ * @returns {Promise|PromiseLike}
+ */
AbstractSurfaceElement.prototype.onClickHandler = function () {
return this.callListeners("onClick");
};
-AbstractSurfaceElement.prototype.getGoogleMarker = function () {
- return this.getGoogleMapObjects()[0];
-};
-
-AbstractSurfaceElement.prototype.getGoogleMapObjects = function () {
- return this._googleMapObjects;
+/**
+ *
+ * @returns {Array}
+ */
+AbstractSurfaceElement.prototype.getMapCanvasObjects = function () {
+ return this._mapCanvasObjects;
};
-AbstractSurfaceElement.prototype.addGoogleMapObject = function (googleObject) {
- this._googleMapObjects.push(googleObject);
+/**
+ *
+ * @param {Rectangle|Polyline} object
+ */
+AbstractSurfaceElement.prototype.addMapCanvasObject = function (object) {
+ this._mapCanvasObjects.push(object);
var self = this;
var onclick = function () {
return self.onClickHandler();
};
- google.maps.event.addListener(googleObject, 'click', onclick);
+ object.addListener('click', onclick);
};
+/**
+ *
+ * @returns {IdentifiedElement}
+ */
AbstractSurfaceElement.prototype.getIdentifiedElement = function () {
return this._identifiedElement;
};
+/**
+ *
+ * @param {IdentifiedElement} identifiedElement
+ */
AbstractSurfaceElement.prototype.setIdentifiedElement = function (identifiedElement) {
this._identifiedElement = identifiedElement;
};
+/**
+ *
+ * @returns {BioEntity}
+ */
AbstractSurfaceElement.prototype.getBioEntity = function () {
return this._bioEntity;
};
+/**
+ *
+ * @param {BioEntity} bioEntity
+ */
AbstractSurfaceElement.prototype.setBioEntity = function (bioEntity) {
this._bioEntity = bioEntity;
};
+/**
+ *
+ * @returns {number}
+ */
AbstractSurfaceElement.prototype.getModelId = function () {
return this.getIdentifiedElement().getModelId();
};
+/**
+ *
+ * @param {IdentifiedElement} identifiedElement
+ */
AbstractSurfaceElement.prototype.updateIdentifiedElement = function (identifiedElement) {
if (identifiedElement.getColor() !== undefined) {
this.setColor(identifiedElement.getColor());
}
};
+/**
+ *
+ * @returns {Bounds}
+ */
AbstractSurfaceElement.prototype.getBounds = function () {
var self = this;
- var bounds = new google.maps.LatLngBounds();
- for (var i = 0; i < self.getGoogleMapObjects().length; i++) {
- var elementBounds = self.getGoogleMapObjects()[i].getBounds();
- bounds.extend(elementBounds.getNorthEast());
- bounds.extend(elementBounds.getSouthWest());
+ var bounds = new Bounds();
+ for (var i = 0; i < self.getMapCanvasObjects().length; i++) {
+ var elementBounds = self.getMapCanvasObjects()[i].getBounds();
+ bounds.extend(elementBounds.getTopLeft());
+ bounds.extend(elementBounds.getRightBottom());
}
-
return bounds;
};
@@ -143,8 +202,20 @@ AbstractSurfaceElement.prototype.getCustomMap = function () {
return this._customMap;
};
+/**
+ *
+ * @param {AbstractCustomMap} customMap
+ */
AbstractSurfaceElement.prototype.setCustomMap = function (customMap) {
this._customMap = customMap;
};
+/**
+ *
+ * @returns {Point}
+ */
+AbstractSurfaceElement.prototype.getCenter = function () {
+ return this.getBioEntity().getCenter();
+};
+
module.exports = AbstractSurfaceElement;
diff --git a/frontend-js/src/main/js/map/surface/AliasSurface.js b/frontend-js/src/main/js/map/surface/AliasSurface.js
index c38438102c590a05908aeea8d044b2390526aabe..9226528c69f5f3a967286d4c49a46f18ee117dfd 100644
--- a/frontend-js/src/main/js/map/surface/AliasSurface.js
+++ b/frontend-js/src/main/js/map/surface/AliasSurface.js
@@ -9,17 +9,45 @@ var functions = require('../../Functions');
var AbstractSurfaceElement = require('./AbstractSurfaceElement');
var ConfigurationType = require('../../ConfigurationType');
var IdentifiedElement = require('../data/IdentifiedElement');
+var Bounds = require('../canvas/Bounds');
+var Point = require('../canvas/Point');
/**
* Class representing overlay of the alias on the map relevant for a specific
* layout.
+ *
+ * @param {LayoutAlias} [params.overlayAlias] - {@link LayoutAlias} for which overlay is created
+ * @param {number} [params.startX] - this is the ratio on OX axis that should be use as a
+ * starting point of the overlay. For instance when there are three
+ * overlays to visualize then
+ * <ul>
+ * <li>the first layout have startX=0.0; endX=0.33333</li>
+ * <li>second layout have startX=0.33333; endX=0.66666</li>
+ * <li>the last layout have startX=0.66666; endX=1.0</li>
+ * </ul>
+ * @param {number} [params.endX] this is the ratio on OX axis that should be use as a
+ * starting point of the overlay
+
+ * @param {IdentifiedElement} [params.element]
+ * @param {Alias} params.alias
+ * @param {AbstractCustomMap} params.map
+ * @param {function|function[]} [params.onClick]
+ * @constructor
+ * @extends AbstractSurfaceElement
*/
function AliasSurface(params) {
// call super constructor
AbstractSurfaceElement.call(this, params);
- // google map object associated with the alias
- this.addGoogleMapObject(params.gmapObj);
+ this.setOverlayData(params.overlayAlias);
+ this.setStartX(params.startX);
+ this.setEndX(params.endX);
+
+ this.setColor(params.color);
+ this.setFillOpacity(params.opacity);
+ this.setStrokeWeight(params.strokeWeight);
+ this.setStrokeColor(params.strokeColor);
+ this.setStrokeOpacity(params.strokeOpacity);
// original data
this.setBioEntity(params.alias);
@@ -29,151 +57,204 @@ function AliasSurface(params) {
AliasSurface.prototype = Object.create(AbstractSurfaceElement.prototype);
AliasSurface.prototype.constructor = AliasSurface;
+/**
+ *
+ * @param {string} color
+ */
AliasSurface.prototype.setColor = function (color) {
+ if (color === undefined) {
+ color = "#FF0000";
+ }
+
this._color = color;
- var googleMapObjects = this.getGoogleMapObjects();
- for (var i = 0; i < googleMapObjects.length; i++) {
- googleMapObjects[i].setOptions({
+ var mapCanvasObjects = this.getMapCanvasObjects();
+ for (var i = 0; i < mapCanvasObjects.length; i++) {
+ mapCanvasObjects[i].setOptions({
strokeColor: color
});
}
};
+/**
+ *
+ * @param {number} opacity
+ */
+AliasSurface.prototype.setFillOpacity = function (opacity) {
+ this._fillOpacity = opacity;
+};
+
+/**
+ *
+ * @returns {number|undefined}
+ */
+AliasSurface.prototype.getFillOpacity = function () {
+ return this._fillOpacity;
+};
+
+/**
+ *
+ * @param {number} weight
+ */
+AliasSurface.prototype.setStrokeWeight = function (weight) {
+ if (weight === undefined) {
+ weight = 1;
+ }
+ this._strokeWeight = weight;
+};
+
+/**
+ *
+ * @returns {number}
+ */
+AliasSurface.prototype.getStrokeWeight = function () {
+ return this._strokeWeight;
+};
+
+/**
+ *
+ * @param {string} color
+ */
+AliasSurface.prototype.setStrokeColor = function (color) {
+ if (color === undefined) {
+ color = "#000000";
+ }
+ this._strokeColor = color;
+};
+
+/**
+ *
+ * @returns {string}
+ */
+AliasSurface.prototype.getStrokeColor = function () {
+ return this._strokeColor;
+};
+
+/**
+ *
+ * @param {number} opacity
+ */
+AliasSurface.prototype.setStrokeOpacity = function (opacity) {
+ if (opacity === undefined) {
+ opacity = 1;
+ }
+ this._strokeOpacity = opacity;
+};
+
+AliasSurface.prototype.getStrokeOpacity = function () {
+ return this._strokeOpacity;
+};
+
/**
* Function used to recalculate boundaries of the {@link AliasSurface}.
* Boundaries define how big part of original alias is taken by this layout
* visualization.
*
- * @param startX
+ * @param {number} startX
* value between 0..1 defining where should be the start on OX axis
- * @param endX
+ * @param {number} endX
* value between 0..1 defining where should be the end on OX axis
*/
AliasSurface.prototype.setBoundsForAlias = function (startX, endX) {
var alias = this.getBioEntity();
- var pointA = new google.maps.Point(alias.x + startX * alias.width, alias.y);
- var pointB = new google.maps.Point(alias.x + endX * alias.width, alias.y + alias.height);
- var latLngA = this.getCustomMap().fromPointToLatLng(pointA);
- var latLngB = this.getCustomMap().fromPointToLatLng(pointB);
+ var pointA = new Point(alias.getX() + startX * alias.getWidth(), alias.getY());
+ var pointB = new Point(alias.getX() + endX * alias.getWidth(), alias.getY() + alias.getHeight());
- var bounds = new google.maps.LatLngBounds();
- bounds.extend(latLngA);
- bounds.extend(latLngB);
- this.getGoogleMapObjects()[0].setBounds(bounds);
+ var bounds = new Bounds(pointA, pointB);
+ this.getMapCanvasObjects()[0].setBounds(bounds);
};
/**
- * Creates {@link AliasSurface}.
*
- * @param params
- * dict containing set of information required for surface creation:
- * <li>overlayAlias - {@link LayoutAlias} for which overlay is created
- * <li>alias - {@link Alias data} of the alias
- * <li>map - {@link AbstractCustomMap} where overlay should be placed
- * <li> startX - this is the ratio on OX axis that should be use as a
- * starting point of the overlay. For instance when there are three
- * overlays to visualize then
- * <ul>
- * <li>the first layout have startX=0.0; endX=0.33333</li>
- * <li>second layout have startX=0.33333; endX=0.66666</li>
- * <li>the last layout have startX=0.66666; endX=1.0</li>
- * </ul>
- * <li>endX this is the ratio on OX axis that should be use as a
- * starting point of the overlay
- * @returns {AliasSurface}
- */
-AliasSurface.create = function (params) {
- var overlayAlias = params.overlayAlias;
- var alias = params.alias;
- var map = params.map;
- var startX = params.startX;
- var endX = params.endX;
-
- var pointA = new google.maps.Point(alias.x + startX * alias.width, alias.y);
- var pointB = new google.maps.Point(alias.x + endX * alias.width, alias.y + alias.height);
- var latLngA = map.fromPointToLatLng(pointA);
- var latLngB = map.fromPointToLatLng(pointB);
-
- var bounds = new google.maps.LatLngBounds();
- bounds.extend(latLngA);
- bounds.extend(latLngB);
+ * @returns {PromiseLike<any>}
+ */
+AliasSurface.prototype.init = function () {
+ var self = this;
+ var overlayData = self.getOverlayData();
+ var alias = self.getBioEntity();
+ var map = self.getCustomMap();
+ var startX = self.getStartX();
+ var endX = self.getEndX();
+
+ var pointA = new Point(alias.getX() + startX * alias.getWidth(), alias.getY());
+ var pointB = new Point(alias.getX() + endX * alias.getWidth(), alias.getY() + alias.getHeight());
+
+ var bounds = new Bounds(pointA, pointB);
var fillOpacity;
return ServerConnector.getConfigurationParam(ConfigurationType.OVERLAY_OPACITY).then(function (result) {
- fillOpacity = result;
- return functions.overlayToColor(overlayAlias);
+ fillOpacity = self.getFillOpacity();
+ if (fillOpacity === undefined) {
+ fillOpacity = result;
+ }
+ if (overlayData !== undefined) {
+ return functions.overlayToColor(overlayData);
+ } else {
+ return "#FF0000";
+ }
}).then(function (color) {
- var rectangle = new google.maps.Rectangle({
+ self.addMapCanvasObject(map.getMapCanvas().createRectangle({
fillOpacity: fillOpacity,
- strokeWeight: 1,
- map: map.getGoogleMap(),
+ strokeColor: self.getStrokeColor(),
+ strokeOpacity: self.getStrokeOpacity(),
+ strokeWeight: self.getStrokeWeight(),
fillColor: color,
bounds: bounds
- });
- return new AliasSurface({
- map: map,
- gmapObj: rectangle,
- alias: alias,
- onClick: params.onClick
- });
+ }));
});
};
-AliasSurface.createFromIdentifiedElement = function (params) {
- var element = params.element;
- var map = params.map;
- var model = map.getProject().getModelById(element.getModelId());
- var fillOpacity;
- return ServerConnector.getConfigurationParam(ConfigurationType.OVERLAY_OPACITY).then(function (result) {
- fillOpacity = result;
- return model.getByIdentifiedElement(element);
- }).then(function (alias) {
- var pointA = new google.maps.Point(alias.getX(), alias.getY());
- var pointB = new google.maps.Point(alias.getX() + alias.getWidth(), alias.getY() + alias.getHeight());
- var latLngA = map.fromPointToLatLng(pointA);
- var latLngB = map.fromPointToLatLng(pointB);
-
- var bounds = new google.maps.LatLngBounds();
- bounds.extend(latLngA);
- bounds.extend(latLngB);
-
- var color = "#FF0000";
- if (element.getColor() !== undefined) {
- color = element.getColor();
- }
- if (element.getOpacity() !== undefined) {
- fillOpacity = element.getOpacity();
- }
- var strokeWeight = 1;
- if (element.getLineWeight() !== undefined) {
- strokeWeight = element.getLineWeight();
- }
- var strokeColor = "#000000";
- if (element.getLineColor() !== undefined) {
- strokeColor = element.getLineColor();
- }
- var strokeOpacity = 1;
- if (element.getLineOpacity() !== undefined) {
- strokeOpacity = element.getLineOpacity();
- }
+/**
+ *
+ * @returns {LayoutAlias}
+ */
+AliasSurface.prototype.getOverlayData = function () {
+ return this._overlayData;
+};
- var rectangle = new google.maps.Rectangle({
- map: map.getGoogleMap(),
- bounds: bounds,
+/**
+ *
+ * @param {LayoutAlias} overlayData
+ */
+AliasSurface.prototype.setOverlayData = function (overlayData) {
+ this._overlayData = overlayData;
+};
- fillOpacity: fillOpacity,
- fillColor: color,
- strokeColor: strokeColor,
- strokeOpacity: strokeOpacity,
- strokeWeight: strokeWeight
- });
+/**
+ *
+ * @returns {number}
+ */
+AliasSurface.prototype.getStartX = function () {
+ return this._startX;
+};
- return new AliasSurface({
- gmapObj: rectangle,
- map: map,
- onClick: params.onClick,
- alias: alias
- });
- });
+/**
+ *
+ * @param {number} startX
+ */
+AliasSurface.prototype.setStartX = function (startX) {
+ if (startX === undefined) {
+ startX = 0;
+ }
+ this._startX = startX;
};
+/**
+ *
+ * @returns {number}
+ */
+AliasSurface.prototype.getEndX = function () {
+ return this._endX;
+};
+
+/**
+ *
+ * @param {number} endX
+ */
+AliasSurface.prototype.setEndX = function (endX) {
+ if (endX === undefined) {
+ endX = 0;
+ }
+ this._endX = endX;
+};
+
+
module.exports = AliasSurface;
diff --git a/frontend-js/src/main/js/map/surface/ReactionSurface.js b/frontend-js/src/main/js/map/surface/ReactionSurface.js
index 1d93d2ec71ea843d916f55e4abb01fd950a84329..8b8a0520a82df550b515ef5d53bd6d8143cae473 100644
--- a/frontend-js/src/main/js/map/surface/ReactionSurface.js
+++ b/frontend-js/src/main/js/map/surface/ReactionSurface.js
@@ -1,31 +1,40 @@
"use strict";
+var Bounds = require('../canvas/Bounds');
+var Point = require('../canvas/Point');
var Promise = require("bluebird");
/* exported logger */
var functions = require('../../Functions');
+// noinspection JSUnusedLocalSymbols
var logger = require('../../logger');
var AbstractSurfaceElement = require('./AbstractSurfaceElement');
var IdentifiedElement = require('../data/IdentifiedElement');
+/**
+ *
+ * @param {IdentifiedElement} [params.element]
+ * @param {AbstractCustomMap} params.map
+ * @param {function|function[]} [params.onClick]
+ * @param {Reaction} params.reaction
+ * @param {LayoutReaction} [params.layoutReaction]
+ * @param {boolean} params.customized
+ * @param {string} [params.color]
+ * @constructor
+ * @extends AbstractSurfaceElement
+ */
function ReactionSurface(params) {
// call super constructor
AbstractSurfaceElement.call(this, params);
- var overlayData = params.layoutReaction;
+ this.setWidth(5.0);
+ this.setOverlayData(params.layoutReaction);
this.setBioEntity(params.reaction);
var color = params.color;
- this.width = 5.0;
- // list of google map objects associated with the reaction (like lines)
- if (overlayData !== undefined && overlayData !== null) {
- if (overlayData.width) {
- this.width = overlayData.width;
- }
- }
if (color === undefined) {
color = "#0000FF";
}
@@ -33,32 +42,32 @@ function ReactionSurface(params) {
this.setColor(color);
this.setCustomized(params.customized);
this.setIdentifiedElement(new IdentifiedElement(this.getBioEntity()));
-
- this.init();
}
ReactionSurface.prototype = Object.create(AbstractSurfaceElement.prototype);
ReactionSurface.prototype.constructor = ReactionSurface;
/**
- * Returns {@link google.maps.Bounds bounds} of all google maps elements
+ * Returns {@link Bounds} of all google maps elements
* included in the object.
*
- * @returns {@link google.maps.Bounds bounds} of all google maps elements
+ * @returns {Bounds} of all google maps elements
* included in the object
*/
ReactionSurface.prototype.getBounds = function () {
- var bounds = new google.maps.LatLngBounds();
+ var bounds = new Bounds();
- for (var i = 0; i < this.getGoogleMapObjects().length; i++) {
- var line = this.getGoogleMapObjects()[i];
- for (var j = 0; j < line.getPath().getLength(); j++) {
- bounds.extend(line.getPath().getAt(j));
- }
+ for (var i = 0; i < this.getMapCanvasObjects().length; i++) {
+ var line = this.getMapCanvasObjects()[i];
+ bounds.extend(line.getBounds());
}
return bounds;
};
+/**
+ *
+ * @param {boolean} customized
+ */
ReactionSurface.prototype.setCustomized = function (customized) {
this.customized = customized;
};
@@ -67,14 +76,14 @@ ReactionSurface.prototype.setCustomized = function (customized) {
* Sets color to be used by the reaction overlay visualization when visualized
* in customized mode.
*
- * @param color
+ * @param {string} color
* new color value
*/
ReactionSurface.prototype.setColor = function (color) {
this._color = color;
- var gmapObjects = this.getGoogleMapObjects();
- for (var i = 0; i < gmapObjects.length; i++) {
- gmapObjects[i].setOptions({
+ var mapCanvasObjects = this.getMapCanvasObjects();
+ for (var i = 0; i < mapCanvasObjects.length; i++) {
+ mapCanvasObjects[i].setOptions({
strokeColor: color
});
}
@@ -85,11 +94,11 @@ ReactionSurface.prototype.setColor = function (color) {
* Sets width of line to be used by the reaction overlay visualization when
* visualized in customized mode.
*
- * @param width
+ * @param {number} width
* new width value
*/
ReactionSurface.prototype.setWidth = function (width) {
- if (width !== undefined || width !== null) {
+ if (width !== undefined && width !== null) {
this.width = width;
} else {
this.width = 1.0;
@@ -100,7 +109,7 @@ ReactionSurface.prototype.setWidth = function (width) {
/**
* Returns color that should be used when visualized in customized mode.
*
- * @returns color that should be used when visualized in customized mode.
+ * @returns {string} color that should be used when visualized in customized mode.
*/
ReactionSurface.prototype.getColor = function () {
return this._color;
@@ -109,7 +118,7 @@ ReactionSurface.prototype.getColor = function () {
/**
* Returns width that should be used when visualized in customized mode.
*
- * @returns width that should be used when visualized in customized mode.
+ * @returns {number} width that should be used when visualized in customized mode.
*/
ReactionSurface.prototype.getWidth = function () {
return this.width;
@@ -124,12 +133,12 @@ ReactionSurface.prototype.getWidth = function () {
* highlighted, but we have no more information. In this way user will know that
* he should investigate the reaction manually.
*
- * @param startX
+ * @param {number} startX
* see {AliasSurface} class for details, in this implementation the
* only important information is that when there are more than one
* overlay visualized at least one of the two parameters (startX,endX)
* will differ from {0.0, 1.0} values
- * @param endX
+ * @param {number} endX
* see {AliasSurface} class for details, in this implementation the
* only important information is that when there are more than one
* overlay visualized at least one of the two parameters (startX,endX)
@@ -148,8 +157,8 @@ ReactionSurface.prototype.setBoundsForAlias = function (startX, endX) {
* reaction as highlighted, but we skip customized reaction overlay data.
*/
ReactionSurface.prototype.changedToDefault = function () {
- for (var i = 0; i < this.getGoogleMapObjects().length; i++) {
- this.getGoogleMapObjects()[i].setOptions({
+ for (var i = 0; i < this.getMapCanvasObjects().length; i++) {
+ this.getMapCanvasObjects()[i].setOptions({
strokeColor: "#0000FF",
strokeWeight: 5
});
@@ -162,8 +171,8 @@ ReactionSurface.prototype.changedToDefault = function () {
* reaction as highlighted with customized reaction overlay data.
*/
ReactionSurface.prototype.changedToCustomized = function () {
- for (var i = 0; i < this.getGoogleMapObjects().length; i++) {
- this.getGoogleMapObjects()[i].setOptions({
+ for (var i = 0; i < this.getMapCanvasObjects().length; i++) {
+ this.getMapCanvasObjects()[i].setOptions({
strokeColor: this.getColor(),
strokeWeight: this.getWidth()
});
@@ -174,94 +183,130 @@ ReactionSurface.prototype.changedToCustomized = function () {
/**
* Creates {google.maps.Polyline} from input data.
*
- * @param line
+ * @param {Object} line
* raw data about line taken from server
- * @param color
+ * @param {number} line.start.x
+ * @param {number} line.start.y
+ * @param {number} line.end.x
+ * @param {number} line.end.y
+ *
+ * @param {string} color
* color that should be used for visualization of the line
- * @param width
+ * @param {number} width
* width that should be used for visualization of the line
- * @param map
- * {google.maps.Map} where line should be visualized
- * @returns {google.maps.Polyline} from input data
+ * @param {AbstractCustomMap} map
+ * where line should be visualized
+ * @returns {Polyline} from input data
*/
ReactionSurface.createLine = function (line, color, width, map) {
- var pointA = new google.maps.Point(line.start.x, line.start.y);
- var pointB = new google.maps.Point(line.end.x, line.end.y);
- var latLngA = map.fromPointToLatLng(pointA);
- var latLngB = map.fromPointToLatLng(pointB);
- var path = [latLngA, latLngB];
+ var pointA = new Point(line.start.x, line.start.y);
+ var pointB = new Point(line.end.x, line.end.y);
+ var path = [pointA, pointB];
- var googleLine = new google.maps.Polyline({
+ return map.getMapCanvas().createPolyline({
strokeColor: color,
strokeOpacity: 1.0,
strokeWeight: width,
- path: path,
- map: map.map
+ path: path
});
- return googleLine;
};
+/**
+ *
+ * @returns {number}
+ */
ReactionSurface.prototype.getId = function () {
return this._id;
};
+/**
+ *
+ * @param {number} id
+ */
ReactionSurface.prototype.setId = function (id) {
this._id = id;
};
-ReactionSurface.prototype.setBioEntity = function (value) {
- if (value === undefined || value === null) {
+/**
+ *
+ * @returns {LayoutReaction}
+ */
+ReactionSurface.prototype.getOverlayData = function () {
+ return this._overlayData;
+};
+
+/**
+ *
+ * @param {LayoutReaction} overlayData
+ */
+ReactionSurface.prototype.setOverlayData = function (overlayData) {
+ this._overlayData = overlayData;
+ if (overlayData !== undefined) {
+ if (overlayData.width) {
+ this.setWidth(overlayData.width);
+ }
+ }
+};
+
+/**
+ *
+ * @param {BioEntity} bioEntity
+ */
+ReactionSurface.prototype.setBioEntity = function (bioEntity) {
+ if (bioEntity === undefined || bioEntity === null) {
throw new Error("Reaction must be defined");
}
- AbstractSurfaceElement.prototype.setBioEntity.call(this, value);
- this.setId(value.getId());
+ AbstractSurfaceElement.prototype.setBioEntity.call(this, bioEntity);
+ this.setId(bioEntity.getId());
};
+/**
+ *
+ * @returns {boolean}
+ */
ReactionSurface.prototype.isCustomized = function () {
return this.customized;
};
+/**
+ *
+ * @returns {Promise}
+ */
ReactionSurface.prototype.init = function () {
+ var self = this;
var reaction = this.getBioEntity();
- var i;
- var line;
- var googleLine;
- for (i = 0; i < reaction.startLines.length; i++) {
- line = reaction.startLines[i];
- googleLine = ReactionSurface.createLine(line, this.getColor(), this.width, this.getCustomMap());
- this.addGoogleMapObject(googleLine);
- }
- for (i = 0; i < reaction.endLines.length; i++) {
- line = reaction.endLines[i];
- googleLine = ReactionSurface.createLine(line, this.getColor(), this.width, this.getCustomMap());
- this.addGoogleMapObject(googleLine);
- }
- for (i = 0; i < reaction.midLines.length; i++) {
- line = reaction.midLines[i];
- googleLine = ReactionSurface.createLine(line, this.getColor(), this.width, this.getCustomMap());
- this.addGoogleMapObject(googleLine);
- }
- if (!this.isCustomized()) {
- this.changedToDefault();
- }
-};
-
-ReactionSurface.create = function (params) {
- var overlayData = params.layoutReaction;
+ var overlayData = this.getOverlayData();
- var promise = Promise.resolve(params.color);
+ var promise = Promise.resolve(self.getColor());
if (overlayData !== undefined && overlayData !== null) {
- if (overlayData.width) {
- this.width = overlayData.width;
- }
promise = functions.overlayToColor(overlayData);
}
return promise.then(function (color) {
if (color === undefined) {
color = "#0000FF";
}
- params.color = color;
- return new ReactionSurface(params);
+ self.setColor(color);
+ var i;
+ var line;
+ var googleLine;
+ for (i = 0; i < reaction.startLines.length; i++) {
+ line = reaction.startLines[i];
+ googleLine = ReactionSurface.createLine(line, self.getColor(), self.getWidth(), self.getCustomMap());
+ self.addMapCanvasObject(googleLine);
+ }
+ for (i = 0; i < reaction.endLines.length; i++) {
+ line = reaction.endLines[i];
+ googleLine = ReactionSurface.createLine(line, self.getColor(), self.getWidth(), self.getCustomMap());
+ self.addMapCanvasObject(googleLine);
+ }
+ for (i = 0; i < reaction.midLines.length; i++) {
+ line = reaction.midLines[i];
+ googleLine = ReactionSurface.createLine(line, self.getColor(), self.getWidth(), self.getCustomMap());
+ self.addMapCanvasObject(googleLine);
+ }
+ if (!self.isCustomized()) {
+ self.changedToDefault();
+ }
});
};
diff --git a/frontend-js/src/main/js/map/window/AbstractInfoWindow.js b/frontend-js/src/main/js/map/window/AbstractInfoWindow.js
index 60f98814f24ad90fe108bdd0dfa45602611e109a..9ca02dc551756c99b7e274cb6c05c6f9f5202378 100644
--- a/frontend-js/src/main/js/map/window/AbstractInfoWindow.js
+++ b/frontend-js/src/main/js/map/window/AbstractInfoWindow.js
@@ -15,58 +15,45 @@ var TargettingStructure = require('../data/TargettingStructure');
/**
* Class representing any info window in our map.
*
- * @param abstractMarker
- * {@link AbstractMarker} to which this window is pointing, can be null
+ * @param {IdentifiedElement} params.identifiedElement
+ * @param {AbstractCustomMap} params.map
+ * @param {Marker} params.marker
+ *
+ * @constructor
*/
function AbstractInfoWindow(params) {
// call super constructor
ObjectWithListeners.call(this);
- this.setIdentifiedElement(params.identifiedElement);
-
- this.setCustomMap(params.map);
- this.setGoogleMarker(params.marker);
-
- this.setContent(this.createWaitingContentDiv());
-
- this._overlayFullView = [];
+ var self = this;
- this.registerPropertyType("overlayFullView");
+ self.setIdentifiedElement(params.identifiedElement);
- // listener called when user want to see all data about specific data overlay
- var onOverlayFullViewChanged = function (e) {
- var self = e.object;
- // first change the content of the element
- return self.update().then(function () {
- if (e.newVal) {
- var element = new IdentifiedElement({
- objectId: self.getElementId(),
- modelId: self.getCustomMap().getId(),
- type: self.getElementType()
- });
- var topMap = self.getCustomMap().getTopMap();
- return topMap.retrieveOverlayDetailDataForElement(element, self.getOverlayFullViewArray());
- }
- });
+ self.setCustomMap(params.map);
+ self.setMarker(params.marker);
- };
+ self.setContent(this.createWaitingContentDiv());
- // default settings of visualizing full information about elements
- this.setOverlayFullView("drug", false);
- this.setOverlayFullView("chemical", false);
- this.setOverlayFullView("mirna", false);
- this.setOverlayFullView("search", false);
- this.setOverlayFullView("missingConnection", false);
- // only all comments should be visible from the beginning
- this.setOverlayFullView("comment", true);
+ self._overlayFullView = [];
- this.addPropertyChangeListener("overlayFullView", onOverlayFullViewChanged);
+ self.registerPropertyType("overlayFullView");
- this.registerListenerType("onShow");
- this.registerListenerType("onUpdate");
+ self.registerListenerType("onShow");
+ self.registerListenerType("onUpdate");
- this.setGuiUtils(new GuiUtils());
+ self.setGuiUtils(new GuiUtils());
+ var dbOverlaySearchChanged = function () {
+ return self.update();
+ };
+ var searchDbOverlay = params.map.getTopMap().getOverlayByName("search");
+ if (searchDbOverlay !== undefined) {
+ searchDbOverlay.addListener("onSearch", dbOverlaySearchChanged);
+ }
+ var commentDbOverlay = params.map.getTopMap().getOverlayByName("comment");
+ if (commentDbOverlay !== undefined) {
+ commentDbOverlay.addListener("onSearch", dbOverlaySearchChanged);
+ }
}
AbstractInfoWindow.prototype = Object.create(ObjectWithListeners.prototype);
@@ -75,9 +62,9 @@ AbstractInfoWindow.prototype.constructor = AbstractInfoWindow;
/**
* Returns <code>true</code> if overlay should visualize all possible values.
*
- * @param overlayName
+ * @param {string} overlayName
* name of the overlay
- * @returns boolean, <code>true</code> if overlay should visualize all possible values
+ * @returns {boolean}, <code>true</code> if overlay should visualize all possible values
*/
AbstractInfoWindow.prototype.isOverlayFullView = function (overlayName) {
if (this._overlayFullView[overlayName] === undefined) {
@@ -90,17 +77,27 @@ AbstractInfoWindow.prototype.isOverlayFullView = function (overlayName) {
* Returns associative array with information if specific overlay should present
* all possible results or only specified by the data searched by user.
*
- * @returns {Array} with information if specific overlay should present all
+ * @returns {Object.<string,boolean>} with information if specific overlay should present all
* possible results or only specified by the data searched by user
*/
AbstractInfoWindow.prototype.getOverlayFullViewArray = function () {
return this._overlayFullView;
};
+/**
+ *
+ * @param {string} overlayName
+ * @param {boolean} value
+ * @returns {Promise}
+ */
AbstractInfoWindow.prototype.setOverlayFullView = function (overlayName, value) {
var oldVal = this._overlayFullView[overlayName];
this._overlayFullView[overlayName] = value;
- return this.firePropertyChangeListener("overlayFullView", overlayName + "," + oldVal, value);
+ if (oldVal !== value) {
+ return this.firePropertyChangeListener("overlayFullView", overlayName + "," + oldVal, value);
+ } else {
+ return Promise.resolve();
+ }
};
/**
@@ -110,30 +107,30 @@ AbstractInfoWindow.prototype.setOverlayFullView = function (overlayName, value)
* <code>false</code> otherwise
*/
AbstractInfoWindow.prototype.isOpened = function () {
- if (this.googleInfowindow === undefined) {
- return false;
- }
- var infoWindowMap = this.googleInfowindow.getMap();
- if (infoWindowMap !== null && typeof infoWindowMap !== "undefined") {
- return true;
- } else {
+ if (this._infoWindow === undefined) {
return false;
}
+ return this._infoWindow.isOpened();
};
/**
* Opens Info Window.
+ *
+ * @param {Marker} [newMarker]
+ *
+ * @returns {PromiseLike<any> | Promise<any>}
*/
AbstractInfoWindow.prototype.open = function (newMarker) {
var self = this;
- if (self.googleInfowindow === null) {
+ var infoWindow = self._infoWindow;
+ if (infoWindow === null || infoWindow === undefined) {
logger.warn("Cannot open window.");
- return;
+ return Promise.resolve();
}
if (newMarker !== undefined) {
- self.setGoogleMarker(newMarker);
+ infoWindow.setMarker(newMarker);
}
- self.googleInfowindow.open(self.getCustomMap().getGoogleMap(), self.getGoogleMarker());
+ infoWindow.open();
return self.update().then(function () {
return self.callListeners("onShow");
@@ -143,21 +140,21 @@ AbstractInfoWindow.prototype.open = function (newMarker) {
/**
* Sets new content of the info window.
*
- * @param content
+ * @param {HTMLElement|string} content
* new content of the window
*/
AbstractInfoWindow.prototype.setContent = function (content) {
var self = this;
self._content = content;
- if (self.googleInfowindow !== undefined) {
- self.googleInfowindow.setContent(content);
+ if (self._infoWindow !== undefined) {
+ self._infoWindow.setContent(content);
}
};
/**
* Returns content visualized in the info window.
*
- * @returns {String} content visualized in the info window
+ * @returns {string|HTMLElement} content visualized in the info window
*/
AbstractInfoWindow.prototype.getContent = function () {
return this._content;
@@ -166,11 +163,11 @@ AbstractInfoWindow.prototype.getContent = function () {
/**
* Creates div for an overlay data.
*
- * @param overlay
- * corresponding {@link OverlayCollection}
- * @param data
+ * @param {AbstractDbOverlay} overlay
+ * corresponding overlay
+ * @param {BioEntity[]|Comment[]|Drug[]|MiRna[]|Chemical[]} data
* data taken from overlay
- * @returns string representing div for given overlay data
+ * @returns {HTMLElement} div for given overlay data
*/
AbstractInfoWindow.prototype.createOverlayInfoDiv = function (overlay, data) {
var alias = this.alias;
@@ -224,9 +221,11 @@ AbstractInfoWindow.prototype.createOverlayInfoDiv = function (overlay, data) {
/**
* Creates and returns div for drug overlay information.
*
- * @param data
+ * @param {AbstractDbOverlay} overlay
+ * @param {Drug[]} data
* data taken from drug overlay
- * @returns {String} with a div for drug overlay information
+ * @returns {HTMLElement} div for drug overlay information
+ * @private
*/
AbstractInfoWindow.prototype._createDrugInfoDiv = function (overlay, data) {
return this._createTargetInfoDiv({
@@ -239,9 +238,10 @@ AbstractInfoWindow.prototype._createDrugInfoDiv = function (overlay, data) {
/**
* Creates and returns div for comment overlay information.
*
- * @param data
+ * @param {AbstractDbOverlay} overlay
+ * @param {Comment[]} data
* data taken from comment overlay
- * @returns {String} with a div for comment overlay information
+ * @returns {HTMLElement} div for comment overlay information
*/
AbstractInfoWindow.prototype._createCommentInfoDiv = function (overlay, data) {
if (data.length === 0 || data[0] === undefined) {
@@ -276,11 +276,10 @@ AbstractInfoWindow.prototype._createCommentInfoDiv = function (overlay, data) {
/**
* Creates and returns div for unknown overlay.
*
- * @param overlay
- * some {@link OverlayCollection}
- * @param data
+ * @param {AbstractDbOverlay} overlay
+ * @param {Array} data
* data taken from overlay
- * @returns Dom element with a div for overlay information
+ * @returns {HTMLElement} div for overlay information
*/
AbstractInfoWindow.prototype._createDefaultInfoDiv = function (overlay, data) {
@@ -316,27 +315,38 @@ AbstractInfoWindow.prototype._createDefaultInfoDiv = function (overlay, data) {
};
/**
- * Returns google.maps.Marker object where this info window is attached.
+ * Returns Marker object where this info window is attached.
*
- * @returns google.maps.Marker object where this info window is attached
+ * @returns {Marker} object where this info window is attached
*/
-AbstractInfoWindow.prototype.getGoogleMarker = function () {
+AbstractInfoWindow.prototype.getMarker = function () {
return this._marker;
};
-AbstractInfoWindow.prototype.setGoogleMarker = function (marker) {
+/**
+ *
+ * @param {Marker} marker
+ */
+AbstractInfoWindow.prototype.setMarker = function (marker) {
this._marker = marker;
+ if (this._infoWindow !== undefined) {
+ this._infoWindow.setMarker(marker);
+ }
};
/**
* Returns {@link AbstractCustomMap} where this window is presented.
*
- * @returns {@link AbstractCustomMap} where this window is presented
+ * @returns {AbstractCustomMap} where this window is presented
*/
AbstractInfoWindow.prototype.getCustomMap = function () {
return this.customMap;
};
+/**
+ *
+ * @param {AbstractCustomMap} map
+ */
AbstractInfoWindow.prototype.setCustomMap = function (map) {
if (map === undefined) {
throw new Error("Map must be defined");
@@ -348,7 +358,7 @@ AbstractInfoWindow.prototype.setCustomMap = function (map) {
* Returns html DOM object with content that should presented when waiting for
* some data from server.
*
- * @returns {String} html with content that should presented when waiting for
+ * @returns {HTMLElement} html with content that should presented when waiting for
* some data from server
*/
AbstractInfoWindow.prototype.createWaitingContentDiv = function () {
@@ -364,6 +374,9 @@ AbstractInfoWindow.prototype.createWaitingContentDiv = function () {
/**
* This is a generic method that updates content of the window.
+ *
+ * @returns {Promise|PromiseLike}
+ * @private
*/
AbstractInfoWindow.prototype._updateContent = function () {
var contentDiv = null;
@@ -392,8 +405,8 @@ AbstractInfoWindow.prototype._updateContent = function () {
/**
* Creates and returns div with overlays content.
*
- * @returns {String} with html representing data taken from
- * {@link OverlayCollection} for this window
+ * @returns {Promise<HTMLElement>} with html representing data taken from
+ * {@link AbstractDbOverlay} for this window
*/
AbstractInfoWindow.prototype.createOverlaysDiv = function () {
var self = this;
@@ -411,13 +424,37 @@ AbstractInfoWindow.prototype.createOverlaysDiv = function () {
});
};
+// noinspection JSUnusedLocalSymbols
+/**
+ * Returns array with data taken from all known {@link AbstractDbOverlay}.
+ *
+ * @param {Object.<string,boolean>} general
+ * if true then all elements will be returned, if false then only ones
+ * available right now in the overlay
+ *
+ * @returns {Promise} array with data from {@link AbstractDbOverlay}
+ */
+AbstractInfoWindow.prototype.getOverlaysData = function (general) {
+ throw new Error("Not implemented");
+};
+
/**
* Abstract method (to be implemented by subclasses) for updating content.
+ *
+ * @returns {Promise}
*/
AbstractInfoWindow.prototype.update = function () {
return this._updateContent();
};
+/**
+ *
+ * @param {string} params.name
+ * @param {AbstractDbOverlay} params.overlay
+ * @param {Array} params.data
+ * @returns {HTMLElement}
+ * @private
+ */
AbstractInfoWindow.prototype._createTargetInfoDiv = function (params) {
var overlay = params.overlay;
var data = params.data;
@@ -426,8 +463,6 @@ AbstractInfoWindow.prototype._createTargetInfoDiv = function (params) {
var self = this;
var result = document.createElement("div");
- var count = 0;
-
var titleElement = document.createElement("h3");
titleElement.innerHTML = name;
result.appendChild(titleElement);
@@ -439,10 +474,9 @@ AbstractInfoWindow.prototype._createTargetInfoDiv = function (params) {
checkbox.id = "checkbox-" + name + "-" + this.getElementType() + "-" + this.getElementId();
checkbox.type = "checkbox";
checkbox.checked = self.isOverlayFullView(overlay.getName());
- var checkboxClickedFunction = function () {
+ checkbox.onclick = function () {
return self.setOverlayFullView(overlay.getName(), this.checked).then(null, GuiConnector.alert);
};
- checkbox.onclick = checkboxClickedFunction;
checkboxDiv.appendChild(checkbox);
@@ -452,7 +486,7 @@ AbstractInfoWindow.prototype._createTargetInfoDiv = function (params) {
checkboxDiv.appendChild(description);
result.appendChild(checkboxDiv);
}
- count = 0;
+ var count = 0;
for (var dataId in data) {
if (data.hasOwnProperty(dataId)) {
count++;
@@ -470,6 +504,13 @@ AbstractInfoWindow.prototype._createTargetInfoDiv = function (params) {
return result;
};
+/**
+ *
+ * @param {Array} data
+ * @param {AbstractDbOverlay} overlay
+ * @returns {HTMLElement}
+ * @private
+ */
AbstractInfoWindow.prototype._createTableForTargetDiv = function (data, overlay) {
var self = this;
var table = document.createElement("table");
@@ -514,17 +555,17 @@ AbstractInfoWindow.prototype._createTableForTargetDiv = function (data, overlay)
type: "a",
onclick: onclick,
href: "#",
- content: nameContent,
+ content: nameContent
});
var nameTd = Functions.createElement({
- type: "td",
+ type: "td"
});
nameTd.appendChild(link);
row.appendChild(nameTd);
var referencesCell = Functions.createElement({
- type: "td",
+ type: "td"
});
referencesCell.appendChild(self.getGuiUtils().createAnnotationList(annotations));
@@ -538,7 +579,7 @@ AbstractInfoWindow.prototype._createTableForTargetDiv = function (data, overlay)
if (self.isOverlayFullView(overlay.getName()) && count === 0) {
row = document.createElement("tr");
cell = document.createElement("td");
- cell.colSpan = "2";
+ cell.colSpan = 2;
cell.innerHTML = "No results available";
row.appendChild(cell);
table.appendChild(row);
@@ -547,7 +588,7 @@ AbstractInfoWindow.prototype._createTableForTargetDiv = function (data, overlay)
if (!self.isOverlayFullView(overlay.getName()) && count === 0 && overlay.allowGeneralSearch()) {
row = document.createElement("tr");
cell = document.createElement("td");
- cell.colSpan = "2";
+ cell.colSpan = 2;
cell.innerHTML = "Search for available targets";
row.appendChild(cell);
table.appendChild(row);
@@ -555,16 +596,68 @@ AbstractInfoWindow.prototype._createTableForTargetDiv = function (data, overlay)
return table;
};
+/**
+ *
+ * @returns {PromiseLike<any> | Promise<any>}
+ */
AbstractInfoWindow.prototype.init = function () {
var self = this;
- return ServerConnector.getConfiguration().then(function (configuration) {
+ var promises = [
+ // default settings of visualizing full information about elements
+ this.setOverlayFullView("drug", false),
+ this.setOverlayFullView("chemical", false),
+ this.setOverlayFullView("mirna", false),
+ this.setOverlayFullView("search", false),
+ // only all comments should be visible from the beginning
+ this.setOverlayFullView("comment", true)
+ ];
+
+ return Promise.all(promises).then(function () {
+ // listener called when user want to see all data about specific data overlay
+ var onOverlayFullViewChanged = function (e) {
+ var self = e.object;
+ // first change the content of the element
+ return self.update().then(function () {
+ if (e.newVal) {
+ var element = new IdentifiedElement({
+ objectId: self.getElementId(),
+ modelId: self.getCustomMap().getId(),
+ type: self.getElementType()
+ });
+ var topMap = self.getCustomMap().getTopMap();
+ return topMap.retrieveOverlayDetailDataForElement(element, self.getOverlayFullViewArray());
+ }
+ });
+
+ };
+
+ self.addPropertyChangeListener("overlayFullView", onOverlayFullViewChanged);
+
+ self._infoWindow = self.getCustomMap().getMapCanvas().createInfoWindow({
+ content: self.content,
+ position: self.getPosition(),
+ marker: self._marker
+ });
+
+ return ServerConnector.getConfiguration();
+ }).then(function (configuration) {
self.getGuiUtils().setConfiguration(configuration);
self.getGuiUtils().setMap(self.getCustomMap());
});
};
+
+/**
+ *
+ * @param {GuiUtils} guiUtils
+ */
AbstractInfoWindow.prototype.setGuiUtils = function (guiUtils) {
this._guiUtils = guiUtils;
};
+
+/**
+ *
+ * @returns {GuiUtils}
+ */
AbstractInfoWindow.prototype.getGuiUtils = function () {
return this._guiUtils;
};
@@ -572,24 +665,27 @@ AbstractInfoWindow.prototype.getGuiUtils = function () {
/**
* Creates and returns DOM div for chemical overlay information.
*
- * @param data
+ * @param {AbstractDbOverlay} overlay
+ * @param {Chemical[]} data
* data taken from chemical overlay
- * @returns DOM element with a div for comment overlay information
+ * @returns {HTMLElement} element with a div for comment overlay information
+ * @private
*/
AbstractInfoWindow.prototype._createChemicalInfoDiv = function (overlay, data) {
return this._createTargetInfoDiv({
overlay: overlay,
data: data,
- name: "Interacting chemicals",
+ name: "Interacting chemicals"
});
};
/**
* Creates and returns DOM div for mi rna overlay information.
*
- * @param data
+ * @param {AbstractDbOverlay} overlay
+ * @param {MiRna[]} data
* data taken from mi rna overlay
- * @returns DOM element with a div for comment overlay information
+ * @returns {HTMLElement} DOM element with a div for comment overlay information
*/
AbstractInfoWindow.prototype._createMiRnaInfoDiv = function (overlay, data) {
return this._createTargetInfoDiv({
@@ -599,6 +695,10 @@ AbstractInfoWindow.prototype._createMiRnaInfoDiv = function (overlay, data) {
});
};
+/**
+ *
+ * @param {IdentifiedElement} identifiedElement
+ */
AbstractInfoWindow.prototype.setIdentifiedElement = function (identifiedElement) {
if (identifiedElement === undefined) {
throw new Error("identifiedElement cannot be undefined");
@@ -606,6 +706,10 @@ AbstractInfoWindow.prototype.setIdentifiedElement = function (identifiedElement)
this._identifiedElement = identifiedElement;
};
+/**
+ *
+ * @returns {IdentifiedElement}
+ */
AbstractInfoWindow.prototype.getIdentifiedElement = function () {
return this._identifiedElement;
};
@@ -613,6 +717,8 @@ AbstractInfoWindow.prototype.getIdentifiedElement = function () {
/**
* Method returning identifier of the object for which this window was created.
+ *
+ * @returns {string|number}
*/
AbstractInfoWindow.prototype.getElementId = function () {
return this.getIdentifiedElement().getId();
@@ -620,9 +726,18 @@ AbstractInfoWindow.prototype.getElementId = function () {
/**
* Method returning type of the object for which this window was created.
+ *
+ * @returns {string}
*/
AbstractInfoWindow.prototype.getElementType = function () {
return this.getIdentifiedElement().getType();
};
+/**
+ * @returns {Point}
+ */
+AbstractInfoWindow.prototype.getPosition = function () {
+ throw new Error("Not Implemented");
+};
+
module.exports = AbstractInfoWindow;
diff --git a/frontend-js/src/main/js/map/window/AliasInfoWindow.js b/frontend-js/src/main/js/map/window/AliasInfoWindow.js
index bae098392d7fc16b15a8c3b579c855ad86f84dac..5f9957d418f073468ce95763fe133a99d75c6df2 100644
--- a/frontend-js/src/main/js/map/window/AliasInfoWindow.js
+++ b/frontend-js/src/main/js/map/window/AliasInfoWindow.js
@@ -1,12 +1,13 @@
"use strict";
var logger = require('../../logger');
-var functions = require('../../Functions');
+var Functions = require('../../Functions');
var AbstractInfoWindow = require('./AbstractInfoWindow');
var Alias = require('../data/Alias');
var IdentifiedElement = require('../data/IdentifiedElement');
var LayoutAlias = require('../data/LayoutAlias');
+var Point = require('../canvas/Point');
var pileup = require('pileup');
@@ -14,8 +15,18 @@ var Promise = require("bluebird");
/**
* Class representing info window that should be opened when clicking on alias.
+ *
+ * @param {IdentifiedElement} [params.identifiedElement]
+ * @param {AbstractCustomMap} params.map
+ * @param {Marker} params.marker
+ * @param {Alias} params.alias
+ *
+ * @constructor
+ * @extends AbstractInfoWindow
*/
function AliasInfoWindow(params) {
+ var self = this;
+
if (params.identifiedElement === undefined) {
params.identifiedElement = new IdentifiedElement(params.alias);
}
@@ -24,14 +35,32 @@ function AliasInfoWindow(params) {
this.setAlias(params.alias);
- var alias = this.getAlias();
+ var overlayListChanged = function () {
+ return self.getCustomMap().getAliasVisibleLayoutsData(self.getAlias().getId()).then(function (layoutAliases) {
+ self.layoutAliases = layoutAliases;
+ return self.update();
+ });
+ };
- var point = new google.maps.Point(alias.x + alias.width / 2, alias.y + alias.height / 2);
- var latLng = this.customMap.fromPointToLatLng(point);
- this.googleInfowindow = new google.maps.InfoWindow({
- content: this.content,
- position: latLng
- });
+ var dbOverlaySearchChanged = function () {
+ return self.update();
+ };
+
+ params.map.getTopMap().addListener("onShowOverlay", overlayListChanged);
+ params.map.getTopMap().addListener("onHideOverlay", overlayListChanged);
+
+ var drugDbOverlay = params.map.getTopMap().getOverlayByName("drug");
+ if (drugDbOverlay !== undefined) {
+ drugDbOverlay.addListener("onSearch", dbOverlaySearchChanged);
+ }
+ var chemicalDbOverlay = params.map.getTopMap().getOverlayByName("chemical");
+ if (chemicalDbOverlay !== undefined) {
+ chemicalDbOverlay.addListener("onSearch", dbOverlaySearchChanged);
+ }
+ var mirnaDbOverlay = params.map.getTopMap().getOverlayByName("mirna");
+ if (mirnaDbOverlay !== undefined) {
+ mirnaDbOverlay.addListener("onSearch", dbOverlaySearchChanged);
+ }
}
AliasInfoWindow.prototype = Object.create(AbstractInfoWindow.prototype);
@@ -43,26 +72,24 @@ AliasInfoWindow.prototype.constructor = AliasInfoWindow;
* from {@link CustomMap} instance. The only optional parameter is {@link Alias}
* data.
*
- * @param newAlias
- * optional {@link Alias} data for which this {@link AliasInfoWindow}
- * was created
+ * @returns {Promise}
*/
-AliasInfoWindow.prototype.update = function (newAlias) {
- if (this.alias === undefined && newAlias !== undefined) {
- this.alias = newAlias;
- }
- return this._updateContent();
+AliasInfoWindow.prototype.update = function () {
+ return AbstractInfoWindow.prototype.update.call(this);
};
+/**
+ *
+ * @returns {PromiseLike<any>}
+ */
AliasInfoWindow.prototype.init = function () {
var self = this;
var alias = self.getAlias();
return AbstractInfoWindow.prototype.init.call(self).then(function () {
return self.getCustomMap().getModel().getAliasById(alias.getId(), true);
}).then(function (alias) {
- return self.update(alias);
- }).then(function () {
- return self.open();
+ self.setAlias(alias);
+ return self.update();
});
};
@@ -70,7 +97,7 @@ AliasInfoWindow.prototype.init = function () {
* Creates and returns chart representing data related to alias on different
* overlays.
*
- * @returns {String} html string representing chart with data related to alias
+ * @returns {PromiseLike<HTMLElement>} html element representing chart with data related to alias
* on different overlays
*/
AliasInfoWindow.prototype.createChartDiv = function () {
@@ -92,7 +119,7 @@ AliasInfoWindow.prototype.createChartDiv = function () {
rows[i] = rowDiv;
if (data !== undefined && data !== null) {
- return functions.overlayToColor(data).then(function (color) {
+ return Functions.overlayToColor(data).then(function (color) {
var value = parseFloat(data.value);
var description = data.description;
if (description === null || description === undefined || description === "") {
@@ -173,7 +200,7 @@ AliasInfoWindow.prototype.createChartDiv = function () {
/**
* Methods that creates and return DOM object with the content of the window.
*
- * @returns DOM object representing html code for content of the info window
+ * @returns {Promise<HTMLElement>| PromiseLike<HTMLElement> } DOM object representing html code for content of the info window
*/
AliasInfoWindow.prototype.createContentDiv = function () {
var self = this;
@@ -210,14 +237,22 @@ AliasInfoWindow.prototype.createContentDiv = function () {
};
/**
- * Returns array with data taken from all known {@link OverlayCollection}.
+ * Returns array with data taken from all known {@link AbstractDbOverlay}.
*
- * @returns array with data from {@link OverlayCollection}
+ * @param {Object.<string,boolean>} general
+ * if true then all elements will be returned, if false then only ones
+ * available right now in the overlay
+ *
+ * @returns {Promise} array with data from {@link AbstractDbOverlay}
*/
AliasInfoWindow.prototype.getOverlaysData = function (general) {
return this.getCustomMap().getTopMap().getOverlayDataForAlias(this.getAlias(), general);
};
+/**
+ *
+ * @returns {PromiseLike<HTMLElement>}
+ */
AliasInfoWindow.prototype.createGenomicDiv = function () {
var self = this;
@@ -359,6 +394,11 @@ AliasInfoWindow.prototype.createGenomicDiv = function () {
});
};
+/**
+ *
+ * @param {GeneVariant[]} geneVariants
+ * @returns {string}
+ */
AliasInfoWindow.prototype.createVcfString = function (geneVariants) {
var result = "";
result += "##fileformat=VCFv4.0\n";
@@ -385,6 +425,10 @@ AliasInfoWindow.prototype.createVcfString = function (geneVariants) {
return result;
};
+/**
+ *
+ * @param {Alias} alias
+ */
AliasInfoWindow.prototype.setAlias = function (alias) {
if (alias === undefined || alias === null || (!(alias instanceof Alias))) {
throw new Error("invalid alias");
@@ -392,6 +436,10 @@ AliasInfoWindow.prototype.setAlias = function (alias) {
this.alias = alias;
};
+/**
+ *
+ * @returns {Alias}
+ */
AliasInfoWindow.prototype.getAlias = function () {
return this.alias;
};
@@ -402,4 +450,14 @@ AliasInfoWindow.prototype.destroy = function () {
}
};
+/**
+ *
+ * @returns {Point}
+ */
+AliasInfoWindow.prototype.getPosition = function () {
+ var alias = this.getAlias();
+ return new Point(alias.x + alias.width / 2, alias.y + alias.height / 2);
+};
+
+
module.exports = AliasInfoWindow;
diff --git a/frontend-js/src/main/js/map/window/PointInfoWindow.js b/frontend-js/src/main/js/map/window/PointInfoWindow.js
index c850896c7ab42a313eae7b6a9a593762edcc0d30..dc1c2d7f8bb90b04f783ce2ebd63acbad6f380ba 100644
--- a/frontend-js/src/main/js/map/window/PointInfoWindow.js
+++ b/frontend-js/src/main/js/map/window/PointInfoWindow.js
@@ -5,6 +5,16 @@ var Promise = require("bluebird");
var AbstractInfoWindow = require('./AbstractInfoWindow');
var IdentifiedElement = require('../data/IdentifiedElement');
+/**
+ *
+ * @param {IdentifiedElement} [params.identifiedElement]
+ * @param {AbstractCustomMap} params.map
+ * @param {Marker} params.marker
+ * @param {PointData} params.point
+ *
+ * @constructor
+ * @extends AbstractInfoWindow
+ */
function PointInfoWindow(params) {
if (params.identifiedElement === undefined) {
params.identifiedElement = new IdentifiedElement(params.point);
@@ -14,19 +24,15 @@ function PointInfoWindow(params) {
this.pointData = params.point;
- var point = this.pointData.getPoint();
- var latLng = this.getCustomMap().fromPointToLatLng(point);
- this.googleInfowindow = new google.maps.InfoWindow({
- content: this.content,
- position: latLng
- });
- this.googleInfowindow.open(this.getCustomMap().getGoogleMap(), this.getGoogleMarker());
- this.update();
}
PointInfoWindow.prototype = Object.create(AbstractInfoWindow.prototype);
PointInfoWindow.prototype.constructor = PointInfoWindow;
+/**
+ *
+ * @returns {PromiseLike<HTMLElement>}
+ */
PointInfoWindow.prototype.createContentDiv = function () {
var result = document.createElement("div");
var title = document.createElement("h3");
@@ -36,9 +42,22 @@ PointInfoWindow.prototype.createContentDiv = function () {
return Promise.resolve(result);
};
+/**
+ *
+ * @param {Object.<string,boolean>} general
+ * @returns {Promise}
+ */
PointInfoWindow.prototype.getOverlaysData = function (general) {
return this.getCustomMap().getTopMap().getOverlayDataForPoint(this.pointData, general);
};
+/**
+ *
+ * @returns {Point}
+ */
+PointInfoWindow.prototype.getPosition = function () {
+ return this.pointData.getPoint();
+};
+
module.exports = PointInfoWindow;
diff --git a/frontend-js/src/main/js/map/window/ReactionInfoWindow.js b/frontend-js/src/main/js/map/window/ReactionInfoWindow.js
index d7bc60aebddd493b627e7af73def2c55cca71f47..cca0f9d2c820e3e6b6ebe8ed31a42415f8ffc07d 100644
--- a/frontend-js/src/main/js/map/window/ReactionInfoWindow.js
+++ b/frontend-js/src/main/js/map/window/ReactionInfoWindow.js
@@ -13,6 +13,16 @@ var logger = require('../../logger');
* Class representing info window that should be opened when clicking on
* reaction.
*/
+/**
+ *
+ * @param {IdentifiedElement} [params.identifiedElement]
+ * @param {AbstractCustomMap} params.map
+ * @param {Marker} params.marker
+ * @param {Reaction} params.reaction
+ *
+ * @constructor
+ * @extends AbstractInfoWindow
+ */
function ReactionInfoWindow(params) {
if (params.identifiedElement === undefined) {
params.identifiedElement = new IdentifiedElement(params.reaction);
@@ -23,14 +33,6 @@ function ReactionInfoWindow(params) {
var self = this;
self.setReactionData(params.reaction);
-
- var reaction = self.getReactionData();
- var point = reaction.getCenter();
- var latLng = self.getCustomMap().fromPointToLatLng(point);
- this.googleInfowindow = new google.maps.InfoWindow({
- content: this.content,
- position: latLng
- });
if (params.reaction.getKineticLaw() !== undefined) {
self.addListener("onShow", function () {
return MathJax.Hub.Queue(["Typeset", MathJax.Hub]);
@@ -44,7 +46,7 @@ ReactionInfoWindow.prototype.constructor = ReactionInfoWindow;
/**
* Methods that creates and return html code with the content of the window.
*
- * @returns Promise representing html code for content of the info window
+ * @returns {Promise} representing html code for content of the info window
*/
ReactionInfoWindow.prototype.createContentDiv = function () {
var self = this;
@@ -58,8 +60,14 @@ ReactionInfoWindow.prototype.createContentDiv = function () {
result.appendChild(self.createElementsDiv(reaction));
return result;
});
-
};
+
+/**
+ *
+ * @param {Reaction} reaction
+ * @param {HTMLElement} result
+ * @returns {Promise}
+ */
ReactionInfoWindow.prototype.createKineticsDiv = function (reaction, result) {
var self = this;
if (reaction.getKineticLaw() === undefined) {
@@ -109,6 +117,11 @@ ReactionInfoWindow.prototype.createKineticsDiv = function (reaction, result) {
}
};
+/**
+ *
+ * @param {SbmlFunction[]} functions
+ * @returns {HTMLElement}
+ */
ReactionInfoWindow.prototype.createSbmlFunctionDiv = function (functions) {
var result = Functions.createElement({type: "div"});
if (functions.length > 0) {
@@ -133,6 +146,11 @@ ReactionInfoWindow.prototype.createSbmlFunctionDiv = function (functions) {
return result;
};
+/**
+ *
+ * @param {SbmlParameter[]} parameters
+ * @returns {HTMLElement}
+ */
ReactionInfoWindow.prototype.createSbmlParameterDiv = function (parameters) {
var result = Functions.createElement({type: "div"});
if (parameters.length > 0) {
@@ -149,6 +167,11 @@ ReactionInfoWindow.prototype.createSbmlParameterDiv = function (parameters) {
return result;
};
+/**
+ *
+ * @param {Reaction} reaction
+ * @returns {HTMLElement}
+ */
ReactionInfoWindow.prototype.createElementsDiv = function (reaction) {
var result = Functions.createElement({type: "div"});
result.appendChild(Functions.createElement({type: "h5", content: "Elements: "}));
@@ -185,26 +208,41 @@ ReactionInfoWindow.prototype.createElementsDiv = function (reaction) {
return result;
};
+/**
+ *
+ * @returns {PromiseLike<any> | Promise<any>}
+ */
ReactionInfoWindow.prototype.init = function () {
var self = this;
- return AbstractInfoWindow.prototype.init.call(this).then(function () {
- return self.update(self.getReactionData());
+ return Promise.resolve().then(function () {
+ return AbstractInfoWindow.prototype.init.call(self);
+ }).then(function () {
+ return self.update();
});
};
/**
- * Returns array with data taken from all known {@link OverlayCollection}.
+ * Returns array with data taken from all known {@link AbstractDbOverlay}.
*
- * @returns Promise of an array with data from {@link OverlayCollection}
+ * @param {Object.<string,boolean>} general
+ * @returns {Promise} of an array with data from {@link AbstractDbOverlay}
*/
ReactionInfoWindow.prototype.getOverlaysData = function (general) {
return this.getCustomMap().getTopMap().getOverlayDataForReaction(this.getReactionData(), general);
};
+/**
+ *
+ * @returns {Reaction}
+ */
ReactionInfoWindow.prototype.getReactionData = function () {
return this._reactionData;
};
+/**
+ *
+ * @param {Reaction} reactionData
+ */
ReactionInfoWindow.prototype.setReactionData = function (reactionData) {
if (reactionData === undefined || reactionData === null) {
throw new Error("Reaction must be specified");
@@ -215,4 +253,12 @@ ReactionInfoWindow.prototype.setReactionData = function (reactionData) {
}
};
+/**
+ *
+ * @returns {Point}
+ */
+ReactionInfoWindow.prototype.getPosition = function () {
+ return this.getReactionData().getCenter();
+};
+
module.exports = ReactionInfoWindow;
diff --git a/frontend-js/src/main/js/minerva.js b/frontend-js/src/main/js/minerva.js
index 0cffc5c39049005e18b8ec5debaeaf7a81ccece0..5ea1711372f52923b202bb3a5df42e30b7688065 100644
--- a/frontend-js/src/main/js/minerva.js
+++ b/frontend-js/src/main/js/minerva.js
@@ -11,6 +11,7 @@ var CustomMapOptions = require('./map/CustomMapOptions');
var Export = require('./Export');
var GuiUtils = require('./gui/leftPanel/GuiUtils');
var PluginManager = require('./plugin/PluginManager');
+var Point = require('./map/canvas/Point');
var SearchDbOverlay = require('./map/overlay/SearchDbOverlay');
var LeftPanel = require('./gui/leftPanel/LeftPanel');
@@ -20,7 +21,7 @@ var MapContextMenu = require('./gui/MapContextMenu');
var SelectionContextMenu = require('./gui/SelectionContextMenu');
var GuiConnector = require('./GuiConnector');
-var OriginalServerConnector = require('./ServerConnector');
+var ServerConnector = require('./ServerConnector');
var MolStar = require('./map/structure/MolStar');
@@ -45,7 +46,7 @@ function processUrlGetParams(params) {
var model = project.getModelById(modelId);
if (GuiConnector.getParams["x"] !== undefined && GuiConnector.getParams["y"] !== undefined) {
- var point = new google.maps.Point(GuiConnector.getParams["x"], GuiConnector.getParams["y"]);
+ var point = new Point(GuiConnector.getParams["x"], GuiConnector.getParams["y"]);
sessionData.setCenter(model, point);
}
if (GuiConnector.getParams["zoom"] !== undefined) {
@@ -164,7 +165,7 @@ function createDivStructure(element) {
function initGlobals(params) {
if (global.ServerConnector === undefined) {
- global.ServerConnector = OriginalServerConnector;
+ global.ServerConnector = ServerConnector;
if (params.isDebug()) {
logger.setLevel("debug");
} else {
@@ -205,13 +206,11 @@ function getProject(params) {
}
}
-function modifyParamsForTouchInterface(params) {
- if (params.markerOptimization === undefined && params.bigLogo === undefined
- && params.customTouchInterface === undefined) {
- var windowsTouchInterface = ((navigator.appVersion.indexOf("Win") > -1) && ('ontouchstart' in document.documentElement));
- params.markerOptimization = !windowsTouchInterface;
- params.bigLogo = windowsTouchInterface;
- params.customTouchInterface = windowsTouchInterface;
+function modifyParamsForTouchTable(params) {
+ if (params.bigLogo === undefined) {
+ // noinspection UnnecessaryLocalVariableJS
+ var isTouchTable = ((navigator.appVersion.indexOf("Win") > -1) && ('ontouchstart' in document.documentElement));
+ params.bigLogo = isTouchTable;
}
return params;
}
@@ -224,23 +223,24 @@ function assignSplitBarHandler(customMap, pluginManager) {
//TODO should use global size (but element size)
var x = $("body").width() - e.pageX;
$(rightPanelDiv).css("width", x);
- google.maps.event.trigger(customMap.getGoogleMap(), 'resize');
+ customMap.getMapCanvas().triggerListeners('resize');
return pluginManager.callListeners("onResize");
};
$(splitBar).mousedown(function (e) {
e.preventDefault();
$(document).mousemove(mouseDownHandler);
});
- $(document).mouseup(function (e) {
+ $(document).mouseup(function () {
$(document).unbind('mousemove', mouseDownHandler);
});
}
function create(params) {
- params = modifyParamsForTouchInterface(params);
+ params = modifyParamsForTouchTable(params);
if (!(params instanceof CustomMapOptions)) {
params = new CustomMapOptions(params);
}
+ params.setServerConnector(ServerConnector);
initGlobals(params);
params.getElement().style.display = "table";
params.getElement().innerHTML = "<div style='vertical-align:middle;display:table-cell;text-align: center'>"
@@ -260,6 +260,12 @@ function create(params) {
return Promise.reject(new Error(message));
}
params.setProject(project);
+ var promise = Promise.resolve();
+ if (params.getProject().getMapCanvasType() === "GOOGLE_MAPS_API") {
+ promise = functions.loadScript("https://maps.google.com/maps/api/js?libraries=drawing");
+ }
+ return promise;
+ }).then(function(){
var element = params.getElement();
verifyBrowser();
@@ -406,7 +412,7 @@ function createFooter() {
})
}
-function createLoginDiv(params) {
+function createLoginDiv() {
var loggedIn = false;
var result = functions.createElement({type: "center"});
@@ -489,15 +495,13 @@ function createLoginDiv(params) {
});
});
$('#register_button', result).click(function () {
- return ServerConnector.getProjectId().then(function (projectId) {
- var email, content;
- return ServerConnector.getConfigurationParam("REQUEST_ACCOUNT_EMAIL").then(function (result) {
- email = result;
- return ServerConnector.getConfigurationParam("REQUEST_ACCOUNT_DEFAULT_CONTENT");
- }).then(function (result) {
- content = encodeURIComponent(result);
- document.location.href = 'mailto:' + email + '?subject=MINERVA account request&body=' + content;
- });
+ var email, content;
+ return ServerConnector.getConfigurationParam("REQUEST_ACCOUNT_EMAIL").then(function (result) {
+ email = result;
+ return ServerConnector.getConfigurationParam("REQUEST_ACCOUNT_DEFAULT_CONTENT");
+ }).then(function (result) {
+ content = encodeURIComponent(result);
+ document.location.href = 'mailto:' + email + '?subject=MINERVA account request&body=' + content;
});
});
@@ -506,7 +510,7 @@ function createLoginDiv(params) {
function createLogin(params) {
- params = modifyParamsForTouchInterface(params);
+ params = modifyParamsForTouchTable(params);
if (!(params instanceof CustomMapOptions)) {
params = new CustomMapOptions(params);
}
@@ -514,7 +518,7 @@ function createLogin(params) {
// make sure that we are logged in
return ServerConnector.createSession().then(function () {
return ServerConnector.getConfiguration();
- }).then(function (configuration) {
+ }).then(function () {
var loginDiv = createLoginDiv(params);
params.getElement().appendChild(loginDiv);
return createFooter();
@@ -525,7 +529,7 @@ function createLogin(params) {
}
function createExport(params) {
- params = modifyParamsForTouchInterface(params);
+ params = modifyParamsForTouchTable(params);
if (!(params instanceof CustomMapOptions)) {
params = new CustomMapOptions(params);
}
@@ -549,7 +553,7 @@ function createExport(params) {
}
function createAdmin(params) {
- params = modifyParamsForTouchInterface(params);
+ params = modifyParamsForTouchTable(params);
if (!(params instanceof CustomMapOptions)) {
params = new CustomMapOptions(params);
}
@@ -583,7 +587,7 @@ var minerva = {
createLogin: createLogin,
createExport: createExport,
createAdmin: createAdmin,
- ServerConnector: OriginalServerConnector,
+ ServerConnector: ServerConnector,
GuiConnector: GuiConnector
};
diff --git a/frontend-js/src/main/js/plugin/MinervaPluginProxy.js b/frontend-js/src/main/js/plugin/MinervaPluginProxy.js
index 6cd40e983504ab2443b6e38e8ef251fc368e0d59..3675b654a26f5b9c20f46fed88277bc5de95a6ab 100644
--- a/frontend-js/src/main/js/plugin/MinervaPluginProxy.js
+++ b/frontend-js/src/main/js/plugin/MinervaPluginProxy.js
@@ -5,6 +5,9 @@ var IdentifiedElement = require('../map/data/IdentifiedElement');
var UserDbOverlay = require('../map/overlay/UserDbOverlay');
var Configuration = require('../Configuration');
+var Bounds = require('../map/canvas/Bounds');
+var Point = require('../map/canvas/Point');
+
var logger = require('../logger');
var Promise = require("bluebird");
@@ -397,7 +400,7 @@ function createProjectMap(options) {
if (submap === null) {
throw new Error("Unknown modelId: " + params.modelId);
}
- return submap.setCenter(new google.maps.Point(params.x, params.y));
+ return submap.setCenter(new Point(params.x, params.y));
},
getCenter: function (params) {
var submap = map.getSubmapById(params.modelId);
@@ -418,14 +421,9 @@ function createProjectMap(options) {
if (submap === null) {
throw new Error("Unknown modelId: " + params.modelId);
}
- var p1 = new google.maps.Point(params.x1, params.y1);
- var p2 = new google.maps.Point(params.x2, params.y2);
- var latLng1 = submap.fromPointToLatLng(p1);
- var latLng2 = submap.fromPointToLatLng(p2);
- var bounds = new google.maps.LatLngBounds();
- bounds.extend(latLng1);
- bounds.extend(latLng2);
- return submap.getGoogleMap().fitBounds(bounds);
+ var p1 = new Point(params.x1, params.y1);
+ var p2 = new Point(params.x2, params.y2);
+ return submap.getMapCanvas().fitBounds(new Bounds(p1, p2));
},
setZoom: function (params) {
var submap = map.getSubmapById(params.modelId);
@@ -488,6 +486,7 @@ function createPluginData(options) {
};
}
+
function MinervaPluginProxy(options) {
return {
pluginId: options.pluginId,
diff --git a/frontend-js/src/main/js/plugin/PluginManager.js b/frontend-js/src/main/js/plugin/PluginManager.js
index 922d44397dd88680d71c3a13b217719d6acb4862..cb09916dad32de92764429fe21898c92479ce303 100644
--- a/frontend-js/src/main/js/plugin/PluginManager.js
+++ b/frontend-js/src/main/js/plugin/PluginManager.js
@@ -93,7 +93,7 @@ PluginManager.prototype.addPlugin = function (options) {
self._plugins.push(plugin);
return plugin.load().then(function () {
tabData.title.innerHTML = plugin.getName();
- const tab = $(tabData.content);
+ var tab = $(tabData.content);
tab.css('overflow', 'auto');
var adjustHeight = function () {
tab.css('height', 'calc( 100vh - ' + $(tabData.content.parentNode).offset().top + 'px )');
diff --git a/frontend-js/src/test/js/ServerConnector-mock.js b/frontend-js/src/test/js/ServerConnector-mock.js
index 9b0c98452ab834f67eeb87dfc4700597ffcbea09..fa5f72b1f0b1dbb93d97386291cf4fcf646ec32d 100644
--- a/frontend-js/src/test/js/ServerConnector-mock.js
+++ b/frontend-js/src/test/js/ServerConnector-mock.js
@@ -20,7 +20,7 @@ function replaceAsterisk(str) {
function urlToFileName(url) {
var result = url;
var token = OriginalServerConnector.getSessionData().getToken();
- if (token !== undefined && token !== "" && url.startsWith("./testFiles/apiCalls")) {
+ if (token !== undefined && token !== "" && url.indexOf("./testFiles/apiCalls") === 0) {
if (!result.endsWith("&") && !result.endsWith("_")) {
result += "/";
}
diff --git a/frontend-js/src/test/js/google-map-mock.js b/frontend-js/src/test/js/google-map-mock.js
index da044a1d7bdcb24059c6b8b8d4d5e2dd09ec14dc..921f1604be6dacef282072f39499b219723de300 100644
--- a/frontend-js/src/test/js/google-map-mock.js
+++ b/frontend-js/src/test/js/google-map-mock.js
@@ -2,6 +2,10 @@
var Promise = require("bluebird");
+/**
+ * @typedef {Object} google.maps.Marker
+ */
+
/* exported logger */
// noinspection JSUnusedLocalSymbols
@@ -61,6 +65,19 @@ var google = {
RIGHT_BOTTOM: "RIGHT_BOTTOM",
RIGHT_TOP: "RIGHT_TOP"
},
+ /**
+ * @typedef {Object} google.maps.LatLng
+ * @property {function():number} lat
+ * @property {function():number} lng
+ */
+
+ /**
+ *
+ * @param lat
+ * @param lng
+ * @returns {google.maps.LatLng}
+ * @constructor
+ */
LatLng: function (lat, lng) {
this.latitude = parseFloat(lat);
this.longitude = parseFloat(lng);
@@ -71,6 +88,7 @@ var google = {
this.lng = function () {
return this.longitude;
};
+ return this;
},
LatLngBounds: function (ne, sw) {
var data = {
@@ -140,6 +158,12 @@ var google = {
this.setContent = function () {
};
},
+ /**
+ *
+ * @param options
+ * @returns {google.maps.Marker}
+ * @constructor
+ */
Marker: function (options) {
this.options = options;
this.position = options.position;
@@ -157,6 +181,13 @@ var google = {
MarkerImage: function () {
return {};
},
+ /**
+ *
+ * @param div
+ * @param options
+ * @returns {{controls: {TOP_LEFT: Array, LEFT_BOTTOM: Array, RIGHT_BOTTOM: Array, RIGHT_TOP: Array}, getDiv: function(): *, mapTypes: {set: mapTypes.set}, getMapTypeId: function(): *, setMapTypeId: setMapTypeId, setOptions: setOptions, getZoom: function(): *, setZoom: function(*=): *, getCenter: function(): (google.maps.LatLng|google.maps.Point|*), panBy: panBy, setCenter: function(*=): *, getBounds: function(): (google.maps.LatLngBounds|*), setBounds: setBounds, fitBounds: fitBounds}}
+ * @constructor
+ */
Map: function (div, options) {
var data = {};
if (options !== undefined) {
@@ -263,6 +294,18 @@ var google = {
this.options.map = map;
};
},
+ /**
+ * @typedef {Object} google.maps.Polygon
+ * @property {function():google.maps.MVCArray} getPath
+ * @property {function():google.maps.Map} getMap
+ */
+
+ /**
+ *
+ * @param options
+ * @returns {google.maps.Polygon}
+ * @constructor
+ */
Polygon: function (options) {
this.options = options;
if (this.options.paths !== undefined) {
diff --git a/frontend-js/src/test/js/gui/ContextMentu-test.js b/frontend-js/src/test/js/gui/ContextMentu-test.js
index 2c40461755a2950f4ca9740c09f8242c1250c4a1..8b8593717889967a8a817bc9cc7f944627caa567 100644
--- a/frontend-js/src/test/js/gui/ContextMentu-test.js
+++ b/frontend-js/src/test/js/gui/ContextMentu-test.js
@@ -29,8 +29,7 @@ describe('ContextMenu', function () {
customMap: map
});
- var event = document.createEvent('MouseEvent');
- menu.open(event);
+ menu.open(0, 0, new Date().getDate());
assert.equal(logger.getWarnings().length, 0);
});
diff --git a/frontend-js/src/test/js/gui/MapContextMenu-test.js b/frontend-js/src/test/js/gui/MapContextMenu-test.js
index b80cb3e41e859a239f263ce18c022843bc53b335..4070e8ab1b2ae71ca33bafb6520532a9378ebe9b 100644
--- a/frontend-js/src/test/js/gui/MapContextMenu-test.js
+++ b/frontend-js/src/test/js/gui/MapContextMenu-test.js
@@ -3,6 +3,7 @@
require("../mocha-config.js");
var MapContextMenu = require('../../../main/js/gui/MapContextMenu');
+var Point = require('../../../main/js/map/canvas/Point');
var ServerConnector = require('../ServerConnector-mock');
var chai = require('chai');
@@ -42,7 +43,7 @@ describe('MapContextMenu', function () {
customMap: map
});
map.setActiveSubmapId(map.getProject().getModels()[0].getId());
- map.setActiveSubmapClickCoordinates(new google.maps.Point(2, 12));
+ map.setActiveSubmapClickCoordinates(new Point(2, 12));
var handler = $($("a:contains('comment')", $(testDiv))[0]).data("handler");
return handler();
@@ -61,7 +62,7 @@ describe('MapContextMenu', function () {
customMap: map
});
map.setActiveSubmapId(map.getProject().getModels()[0].getId());
- map.setActiveSubmapClickCoordinates(new google.maps.Point(2, 12));
+ map.setActiveSubmapClickCoordinates(new Point(2, 12));
assert.ok(!map.isDrawingOn());
var handler = $($("a:contains('Select mode')", $(testDiv))[0]).data("handler");
diff --git a/frontend-js/src/test/js/gui/OptionsMenu-test.js b/frontend-js/src/test/js/gui/OptionsMenu-test.js
index d8552c092ed14c9aad98d7d36ecd886441e0ea9e..e10ca3ac301155205d73ad7193555c72de410620 100644
--- a/frontend-js/src/test/js/gui/OptionsMenu-test.js
+++ b/frontend-js/src/test/js/gui/OptionsMenu-test.js
@@ -25,8 +25,9 @@ describe('OptionsMenu', function () {
it('open dialog', function () {
var map = helper.createCustomMap();
+ var div = document.createElement("div");
var menu = new OptionsMenu({
- element: testDiv,
+ element: div,
customMap: map
});
var pluginManager;
@@ -38,7 +39,7 @@ describe('OptionsMenu', function () {
menu.setPluginManager(pluginManager);
return menu.open(10, 10, 20);
}).then(function () {
- return $("a", testDiv).data("handler")();
+ return $("a", div).data("handler")();
}).then(function () {
assert.equal(0, logger.getWarnings().length);
return menu.destroy();
diff --git a/frontend-js/src/test/js/gui/OverviewDialog-test.js b/frontend-js/src/test/js/gui/OverviewDialog-test.js
index bde482dc83bd8e8d8584775836ff0831ac369ae0..8b4480f8e6acf2120be5c82949d94e3453fb323b 100644
--- a/frontend-js/src/test/js/gui/OverviewDialog-test.js
+++ b/frontend-js/src/test/js/gui/OverviewDialog-test.js
@@ -15,8 +15,7 @@ describe('OverviewDialog', function () {
it('open image', function () {
helper.setUrl("http://test/?id=complex_model_with_images");
return ServerConnector.getProject().then(function (project) {
- var options = helper.createOptions(project);
- var map = new CustomMap(options);
+ var map = helper.createCustomMap(project);
var dialog = new OverviewDialog({
element: testDiv,
@@ -31,8 +30,7 @@ describe('OverviewDialog', function () {
it('open invalid image', function () {
helper.setUrl("http://test/?id=complex_model_with_images");
return ServerConnector.getProject().then(function (project) {
- var options = helper.createOptions(project);
- var map = new CustomMap(options);
+ var map = helper.createCustomMap(project);
var dialog = new OverviewDialog({
element: testDiv,
diff --git a/frontend-js/src/test/js/gui/SelectionContextMenu-test.js b/frontend-js/src/test/js/gui/SelectionContextMenu-test.js
index ed613d49476eb60e1504335598ad08646ad2181a..8a5314558e2de6993f106fd0e2fe2f2b93eb3848 100644
--- a/frontend-js/src/test/js/gui/SelectionContextMenu-test.js
+++ b/frontend-js/src/test/js/gui/SelectionContextMenu-test.js
@@ -2,6 +2,7 @@
require("../mocha-config.js");
+var Point = require('../../../main/js/map/canvas/Point');
var SelectionContextMenu = require('../../../main/js/gui/SelectionContextMenu');
var ServerConnector = require('../ServerConnector-mock');
@@ -34,7 +35,7 @@ describe('SelectionContextMenu', function () {
return contextMenu.init();
}).then(function () {
map.setActiveSubmapId(map.getProject().getModels()[0].getId());
- map.setActiveSubmapClickCoordinates(new google.maps.Point(2, 12));
+ map.setActiveSubmapClickCoordinates(new Point(2, 12));
var handler = $($("a:contains('PNG')", $(testDiv))[0]).data("handler");
return handler();
@@ -55,7 +56,7 @@ describe('SelectionContextMenu', function () {
return contextMenu.init();
}).then(function () {
map.setActiveSubmapId(map.getProject().getModels()[0].getId());
- map.setActiveSubmapClickCoordinates(new google.maps.Point(2, 12));
+ map.setActiveSubmapClickCoordinates(new Point(2, 12));
var handler = $($("a:contains('CellDesigner')", $(testDiv))[0]).data("handler");
return handler();
}).then(function () {
diff --git a/frontend-js/src/test/js/gui/admin/AddProjectDialog-test.js b/frontend-js/src/test/js/gui/admin/AddProjectDialog-test.js
index f8cb0ea272c99d628743a76ebfbea90a284b45da..8b4e31b352e530ba1597c4e2400ee2a5a428f738 100644
--- a/frontend-js/src/test/js/gui/admin/AddProjectDialog-test.js
+++ b/frontend-js/src/test/js/gui/admin/AddProjectDialog-test.js
@@ -15,6 +15,10 @@ var chai = require('chai');
var assert = chai.assert;
describe('AddProjectDialog', function () {
+ /**
+ *
+ * @returns {AddProjectDialog}
+ */
var createDialog = function () {
return new AddProjectDialog({
element: testDiv,
@@ -189,7 +193,40 @@ describe('AddProjectDialog', function () {
}).then(function () {
dialog.setProjectId("-valid_id");
return dialog.checkValidity();
- }).then().finally(function () {
+ }).finally(function () {
+ return dialog.destroy();
+ });
+ });
+ it('google license not selected', function () {
+ var dialog = createDialog();
+
+ var file = new Blob(["<node></node>"]);
+ file.name = "test.xml";
+ return dialog.init().then(function () {
+ return dialog.callListeners("onFileUpload", file);
+ }).then(function () {
+ dialog.setMapCanvasTypeId("GOOGLE_MAPS_API");
+ return dialog.checkValidity().then(function () {
+ assert.notOk("Expected validation error: license is not accepted");
+ }).catch(function (error) {
+ assert.ok(error instanceof ValidationError);
+ });
+ }).finally(function () {
+ return dialog.destroy();
+ });
+ });
+ it('google license selected', function () {
+ var dialog = createDialog();
+
+ var file = new Blob(["<node></node>"]);
+ file.name = "test.xml";
+ return dialog.init().then(function () {
+ return dialog.callListeners("onFileUpload", file);
+ }).then(function () {
+ dialog.setMapCanvasTypeId("GOOGLE_MAPS_API");
+ dialog.setLicenseAccepted(true);
+ return dialog.checkValidity();
+ }).finally(function () {
return dialog.destroy();
});
});
diff --git a/frontend-js/src/test/js/gui/admin/EditProjectDialog-test.js b/frontend-js/src/test/js/gui/admin/EditProjectDialog-test.js
index 0d808a00081fa7f1f4eb5c3f5215e0f6dbc08654..ef34e782ea17e7f1048441d8986051439bbfb29f 100644
--- a/frontend-js/src/test/js/gui/admin/EditProjectDialog-test.js
+++ b/frontend-js/src/test/js/gui/admin/EditProjectDialog-test.js
@@ -11,15 +11,13 @@ var assert = require('assert');
describe('EditProjectDialog', function () {
function createDialog() {
- return ServerConnector.getProject().then(function (result) {
- var project = result;
- var dialog = new EditProjectDialog({
+ return ServerConnector.getProject().then(function (project) {
+ return new EditProjectDialog({
element: testDiv,
project: project,
customMap: null,
configuration: helper.getConfiguration()
});
- return dialog;
});
}
@@ -96,6 +94,8 @@ describe('EditProjectDialog', function () {
customMap: null,
configuration: helper.getConfiguration()
});
+ return dialog.init();
+ }).then(function () {
return dialog.onSaveClicked();
}).then(function (result) {
assert.ok(project === result);
diff --git a/frontend-js/src/test/js/gui/export/ElementExportPanel-test.js b/frontend-js/src/test/js/gui/export/ElementExportPanel-test.js
index da83d0760d942b6245e3d8349e7cb864c90fc457..011f0beaa28a82ba806010d558b5f7f34040ce0c 100644
--- a/frontend-js/src/test/js/gui/export/ElementExportPanel-test.js
+++ b/frontend-js/src/test/js/gui/export/ElementExportPanel-test.js
@@ -28,7 +28,7 @@ describe('ElementExportPanel', function () {
return exportObject.init();
}).then(function () {
$("input[name='Degraded']", $(testDiv)).each(function (index, element) {
- element.checked = true;
+ $(element).prop("checked", true);
});
return exportObject.getSelectedTypes();
}).then(function (selectedTypes) {
@@ -57,10 +57,10 @@ describe('ElementExportPanel', function () {
return exportObject.init();
}).then(function () {
$("input[name='Degraded']", $(testDiv)).each(function (index, element) {
- element.checked = true;
+ $(element).prop("checked", true);
});
$("input[name='ALL']", $(testDiv)).each(function (index, element) {
- element.checked = true;
+ $(element).prop("checked", true);
});
return exportObject.getSelectedTypes();
}).then(function (selectedTypes) {
@@ -85,7 +85,7 @@ describe('ElementExportPanel', function () {
return exportObject.init();
}).then(function () {
$("input[name='column_name']", $(testDiv)).each(function (index, element) {
- element.checked = true;
+ $(element).prop("checked", true);
});
return exportObject.getSelectedColumns();
}).then(function (selectedTypes) {
@@ -112,10 +112,10 @@ describe('ElementExportPanel', function () {
return exportObject.init();
}).then(function () {
$("input[name='column_name']", $(testDiv)).each(function (index, element) {
- element.checked = true;
+ $(element).prop("checked", true);
});
$("input[name='ALL']", $(testDiv)).each(function (index, element) {
- element.checked = true;
+ $(element).prop("checked", true);
});
return exportObject.getSelectedColumns();
}).then(function (selectedTypes) {
@@ -218,7 +218,7 @@ describe('ElementExportPanel', function () {
return exportObject.init();
}).then(function () {
$("input[name='ALL']", $(testDiv)).each(function (index, element) {
- element.checked = true;
+ $(element).prop("checked", true);
});
var dlb = exportObject.getMiriamTypesDualListbox();
var listItem = dlb.available[0];
@@ -266,7 +266,7 @@ describe('ElementExportPanel', function () {
return exportObject.init();
}).then(function () {
$("input[name='ALL']", $(testDiv)).each(function (index, element) {
- element.checked = true;
+ $(element).prop("checked", true);
});
var element = $("[name='downloadButton']", $(testDiv))[0];
return element.onclick();
diff --git a/frontend-js/src/test/js/gui/export/NetworkExportPanel-test.js b/frontend-js/src/test/js/gui/export/NetworkExportPanel-test.js
index 4e249befcdb70003ba6fa8b840137f4bdba39631..b7d041d431449944fec9de4b54a7fd1829d2a20f 100644
--- a/frontend-js/src/test/js/gui/export/NetworkExportPanel-test.js
+++ b/frontend-js/src/test/js/gui/export/NetworkExportPanel-test.js
@@ -26,7 +26,7 @@ describe('NetworkExportPanel', function () {
return exportObject.init();
}).then(function () {
$("input[name='ALL']", $(testDiv)).each(function (index, element) {
- element.checked = true;
+ $(element).prop("checked", true);
});
var element = $("[name='downloadButton']", $(testDiv))[0];
assert.equal(0, logger.getWarnings().length);
diff --git a/frontend-js/src/test/js/gui/leftPanel/GenericSearchPanel-test.js b/frontend-js/src/test/js/gui/leftPanel/GenericSearchPanel-test.js
index 3a356aedabbbfde5eae3a70cd0a73c8b52072265..5ed0a92606e7ee4375a595a98059100d9981bd24 100644
--- a/frontend-js/src/test/js/gui/leftPanel/GenericSearchPanel-test.js
+++ b/frontend-js/src/test/js/gui/leftPanel/GenericSearchPanel-test.js
@@ -2,11 +2,12 @@
require('../../mocha-config.js');
+var AbstractDbOverlay = require('../../../../main/js/map/overlay/AbstractDbOverlay');
var Alias = require('../../../../main/js/map/data/Alias');
var ConfigurationType = require('../../../../main/js/ConfigurationType');
var GenericSearchPanel = require('../../../../main/js/gui/leftPanel/GenericSearchPanel');
-var AbstractDbOverlay = require('../../../../main/js/map/overlay/AbstractDbOverlay');
var PanelControlElementType = require('../../../../main/js/gui/PanelControlElementType');
+var Point= require('../../../../main/js/map/canvas/Point');
var ServerConnector = require('../../ServerConnector-mock');
var chai = require('chai');
@@ -48,7 +49,7 @@ describe('GenericSearchPanel', function () {
var searchParams = {
modelId: map.getModel().getId(),
- coordinates: new google.maps.Point(457.51, 356.84),
+ coordinates: new Point(457.51, 356.84),
zoom: 4
};
@@ -249,7 +250,7 @@ describe('GenericSearchPanel', function () {
it('map invalid session search query', function () {
var panel = new createPanel();
var unknownModelId = -1;
- var coordinates = new google.maps.Point(0, 0);
+ var coordinates = new Point(0, 0);
var zoom = 2;
var encodedQuery = panel.getOverlayDb().encodeQuery(AbstractDbOverlay.QueryType.SEARCH_BY_COORDINATES, unknownModelId, coordinates, zoom);
ServerConnector.getSessionData().setSearchQuery(encodedQuery);
diff --git a/frontend-js/src/test/js/helper.js b/frontend-js/src/test/js/helper.js
index 3464f548066c6f0598bc544f95408c286f19cf9d..bb886842375a076532515e8536e94d5b89f3d109 100644
--- a/frontend-js/src/test/js/helper.js
+++ b/frontend-js/src/test/js/helper.js
@@ -13,6 +13,7 @@ var CommentDbOverlay = require("../../main/js/map/overlay/CommentDbOverlay");
var CustomMap = require("../../main/js/map/CustomMap");
var CustomMapOptions = require("../../main/js/map/CustomMapOptions");
var DrugDbOverlay = require("../../main/js/map/overlay/DrugDbOverlay");
+var GoogleMapsApiCanvas = require('../../main/js/map/canvas/GoogleMaps/GoogleMapsApiCanvas');
var IdentifiedElement = require("../../main/js/map/data/IdentifiedElement");
var KineticLaw = require("../../main/js/map/data/KineticLaw");
var LayoutAlias = require("../../main/js/map/data/LayoutAlias");
@@ -21,6 +22,7 @@ var LayoutReaction = require("../../main/js/map/data/LayoutReaction");
var MiRnaDbOverlay = require("../../main/js/map/overlay/MiRnaDbOverlay");
var Model = require("../../main/js/map/data/MapModel");
var AbstractDbOverlay = require("../../main/js/map/overlay/AbstractDbOverlay");
+var Point = require('../../main/js/map/canvas/Point');
var Product = require("../../main/js/map/data/Product");
var Project = require("../../main/js/map/data/Project");
var Reactant = require("../../main/js/map/data/Reactant");
@@ -63,6 +65,11 @@ Helper.prototype.createCommentDbOverlay = function (map) {
return result;
};
+/**
+ *
+ * @param {CustomMap} map
+ * @returns {SearchDbOverlay}
+ */
Helper.prototype.createSearchDbOverlay = function (map) {
var result = new SearchDbOverlay({
map: map,
@@ -150,13 +157,26 @@ Helper.prototype.createComment = function (element) {
});
};
-Helper.prototype.createProject = function () {
+/**
+ *
+ * @param {Object} [params]
+ * @param {string} [params.mapCanvasType=OPEN_LAYERS]
+ * @returns {Project}
+ */
+Helper.prototype.createProject = function (params) {
+ if (params === undefined) {
+ params = {};
+ }
+ if (params.mapCanvasType === undefined) {
+ params.mapCanvasType = "OPEN_LAYERS";
+ }
var result = new Project();
result.setProjectId("testId");
result.setId(this.idCounter++);
result.addModel(this.createModel());
- var overlay = this.createOverlay(result);
- result.addDataOverlay(overlay);
+ var overlay = this.createOverlay(result.getModels()[0]);
+ result.addDataOverlay(overlay, false);
+ result.setMapCanvasType(params.mapCanvasType);
return result;
};
@@ -169,6 +189,11 @@ Helper.prototype.createUser = function () {
});
};
+/**
+ *
+ * @param {AbstractCustomMap} [map]
+ * @returns {Alias}
+ */
Helper.prototype.createAlias = function (map) {
var mapId;
if (map === undefined) {
@@ -216,6 +241,11 @@ Helper.prototype.createLayoutAlias = function (alias) {
});
};
+/**
+ *
+ * @param {Reaction} reaction
+ * @returns {LayoutReaction}
+ */
Helper.prototype.createLayoutReaction = function (reaction) {
var reactionId;
var modelId;
@@ -249,6 +279,12 @@ Helper.prototype.createIdentifiedElement = function (element) {
return new IdentifiedElement(element);
};
+/**
+ *
+ * @param {AbstractCustomMap|MapModel} map
+ * @param {boolean} [complete]
+ * @returns {Reaction}
+ */
Helper.prototype.createReaction = function (map, complete) {
var mapId = null;
if (map !== undefined) {
@@ -279,7 +315,7 @@ Helper.prototype.createReaction = function (map, complete) {
},
type: "END"
}],
- centerPoint: new google.maps.Point(0, 0),
+ centerPoint: new Point(0, 0),
modelId: mapId,
references: []
});
@@ -292,18 +328,10 @@ Helper.prototype.createReaction = function (map, complete) {
return result;
};
-Helper.prototype.createOptions = function (project) {
- if (project === undefined) {
- project = this.createProject();
- }
-
- return {
- mapDiv: testDiv,
- element: testDiv,
- project: project
- };
-};
-
+/**
+ *
+ * @returns {MapModel}
+ */
Helper.prototype.createModel = function () {
var result = new Model();
result.setId(this.idCounter++);
@@ -315,6 +343,11 @@ Helper.prototype.createModel = function () {
return result;
};
+/**
+ *
+ * @param {MapModel} [model]
+ * @returns {DataOverlay}
+ */
Helper.prototype.createOverlay = function (model) {
var images = [];
if (model !== undefined) {
@@ -328,38 +361,39 @@ Helper.prototype.createOverlay = function (model) {
});
};
-Helper.prototype.createGoogleMap = function () {
- return new google.maps.Map(testDiv, {
- center: {
- lat: -34.397,
- lng: 150.644
- },
- scrollwheel: false,
- zoom: 8
- });
-};
-
+/**
+ *
+ * @param {Project} [project]
+ * @returns {CustomMapOptions}
+ */
Helper.prototype.createCustomMapOptions = function (project) {
if (project === undefined) {
project = this.createProject();
}
return new CustomMapOptions({
- markerOptimization: true,
project: project,
element: testDiv,
mapDiv: testDiv,
- configuration: this.getConfiguration()
+ configuration: this.getConfiguration(),
+ serverConnector: ServerConnector
});
};
Helper.prototype.createAbstractCustomMap = function () {
var options = this.createCustomMapOptions();
- return new AbstractCustomMap(options.getProject().getModels()[0], options);
+ var result = new AbstractCustomMap(options.getProject().getModels()[0], options);
+ result.setMapCanvas(new GoogleMapsApiCanvas(testDiv, result.createMapOptions()));
+ return result;
};
+/**
+ *
+ * @param project
+ * @returns {CustomMap}
+ */
Helper.prototype.createCustomMap = function (project) {
if (project === null) {
throw new Error("Project cannot be null");
@@ -368,6 +402,16 @@ Helper.prototype.createCustomMap = function (project) {
return new CustomMap(options);
};
+/**
+ *
+ * @param {BioEntity} params.element
+ * @param {AbstractCustomMap} params.map
+ */
+Helper.prototype.createMarker = function (params) {
+ var position = params.element.getCenter();
+ return params.map.getMapCanvas().createMarker({position: position, id: params.element.getId(), icon: "empty.png"});
+};
+
/**
* Changes url but saves the cookies.
*/
@@ -475,6 +519,24 @@ Helper.prototype.createAnnotation = function () {
});
};
+/**
+ *
+ * @returns {GoogleMapsApiCanvas}
+ */
+Helper.prototype.createGoogleCanvas = function () {
+ return new GoogleMapsApiCanvas(testDiv, {
+ center: new Point(0, 0),
+ tileSize: 256,
+ width: 300,
+ height: 600,
+ backgroundOverlays: [{
+ id: 1,
+ name: "overlay",
+ directory: "overlay_dir"
+ }]
+ });
+};
+
Helper.EPSILON = 1e-6;
module.exports = Helper;
diff --git a/frontend-js/src/test/js/map/AbstractCustomMap-test.js b/frontend-js/src/test/js/map/AbstractCustomMap-test.js
index 31aa1fc30729678b9967122bda3d1e6e78eb4d11..5d433c2ffcbc42189434c798c7092744b5a1299a 100644
--- a/frontend-js/src/test/js/map/AbstractCustomMap-test.js
+++ b/frontend-js/src/test/js/map/AbstractCustomMap-test.js
@@ -4,9 +4,11 @@ var Promise = require("bluebird");
require("../mocha-config");
var AliasMarker = require('../../../main/js/map/marker/AliasMarker');
-var AliasSurface = require('../../../main/js/map/surface/AliasSurface');
var AbstractCustomMap = require('../../../main/js/map/AbstractCustomMap');
var IdentifiedElement = require('../../../main/js/map/data/IdentifiedElement');
+var Point = require('../../../main/js/map/canvas/Point');
+
+var ServerConnector = require('../ServerConnector-mock');
var chai = require('chai');
var assert = chai.assert;
@@ -24,202 +26,50 @@ describe('AbstractCustomMap', function () {
assert.ok(mockObject.getModel());
assert.ok(mockObject.getSelectedLayoutOverlays());
- assert.ok(mockObject.pixelOrigin_);
- assert.ok(mockObject.pixelsPerLonDegree_);
- assert.ok(mockObject.pixelsPerLonRadian_);
- assert.ok(mockObject.zoomFactor);
-
assert.equal(mockObject.getAliasInfoWindowById(-1), null);
- assert.equal(mockObject.getPointInfoWindowById(-1), null);
+ assert.equal(mockObject.getPointInfoWindowById("-1"), null);
assert.equal(mockObject.getReactionInfoWindowById(-1), null);
assert.equal(logger.getWarnings().length, 0);
});
- it("setupLayouts", function () {
- var project = helper.createProject();
- var layout = project.getDataOverlays()[0];
- var options = helper.createCustomMapOptions(project);
-
- var mockObject = new AbstractCustomMap(project.getModels()[0], options);
-
- var googleMap = helper.createGoogleMap();
-
- mockObject.setGoogleMap(googleMap);
- mockObject.getTopMap = function () {
- return mockObject
- };
-
- mockObject.setupLayouts();
- assert.ok(mockObject.getGoogleMap().getMapTypeId().indexOf(layout.getId()) >= 0);
- });
-
- it("createMapOptions", function () {
- var mockObject = helper.createCustomMap();
- assert.ok(mockObject.createMapOptions());
-
- });
-
- describe("createTypeOptions", function () {
+ describe("createMapOptions", function () {
it("default", function () {
- var layoutId = 40;
- var layoutName = 'some layout name';
- var layoutDirectory = 'dire45';
-
- var project = helper.createProject();
- var layoutDataObj = {
- idObject: layoutId,
- name: layoutName,
- directory: layoutDirectory
- };
- project.addDataOverlay(layoutDataObj);
-
- var options = helper.createCustomMapOptions(project);
-
- var mockObject = new AbstractCustomMap(project.getModels()[0], options);
+ var model = helper.createModel();
+ var options = helper.createCustomMapOptions();
- var result = mockObject.createTypeOptions(layoutDataObj);
+ var mockObject = new AbstractCustomMap(model, options);
- assert.ok(result);
-
- });
- it("getTileUrl", function () {
- var coordinates = {x: 0, y: 0};
- var map = helper.createCustomMap();
-
- var typeOptions = map.createTypeOptions(map.getProject().getDataOverlays()[0]);
- var url = typeOptions.getTileUrl(coordinates, 3);
- assert.ok(url);
- assert.ok(url.indexOf(coordinates.x) >= 0);
- assert.ok(url.indexOf(coordinates.y) >= 0);
+ assert.ok(mockObject.createMapOptions());
});
- });
-
- it("setMaxZoomLevel", function () {
- var model = helper.createModel();
- var options = helper.createCustomMapOptions();
-
- model.setMaxZoom(4);
-
- var mockObject = new AbstractCustomMap(model, options);
-
- var googleMap = helper.createGoogleMap();
-
- mockObject.setGoogleMap(googleMap);
- mockObject.setMaxZoomLevel();
-
- assert.equal(model.getMaxZoom(), mockObject.getGoogleMap().getZoom());
- });
-
- it("getMouseLatLng", function () {
- var model = helper.createModel();
- var options = helper.createCustomMapOptions();
-
- model.setMaxZoom(4);
-
- var mockObject = new AbstractCustomMap(model, options);
-
- var googleMap = new google.maps.Map(testDiv, {});
- googleMap.setCenter(new google.maps.LatLng(1, 2));
-
- mockObject.setGoogleMap(googleMap);
-
- var coordinates = mockObject.getMouseLatLng();
-
- assert.ok(coordinates);
- assert.ok(coordinates instanceof google.maps.LatLng);
- });
-
- it("fromPixelsToPoint 1", function () {
- var model = helper.createModel();
- var options = helper.createCustomMapOptions();
-
- model.setWidth(256);
- model.setHeight(256);
- model.setMinZoom(2);
- model.setMaxZoom(2);
-
- var mockObject = new AbstractCustomMap(model, options);
-
- var pointDist = {
- x: 120,
- y: 140
- };
-
- var normalizedPoint = mockObject.fromPixelsToPoint(pointDist, 2);
-
- assert.ok(normalizedPoint);
- assert.equal(normalizedPoint.x, pointDist.x);
- assert.equal(normalizedPoint.y, pointDist.y);
-
- });
-
- it("fromPixelsToPoint 2", function () {
- var model = helper.createModel();
- var options = helper.createCustomMapOptions();
-
- model.setWidth(512);
- model.setHeight(512);
- model.setMinZoom(2);
- model.setMaxZoom(3);
-
- var mockObject = new AbstractCustomMap(model, options);
-
- var pointDist = {
- x: 120,
- y: 140
- };
-
- var normalizedPoint = mockObject.fromPixelsToPoint(pointDist, 2);
+ it("check params", function () {
+ var model = helper.createModel();
+ var options = helper.createCustomMapOptions();
- assert.ok(normalizedPoint);
- assert.equal(2 * pointDist.x, normalizedPoint.x);
- assert.equal(2 * pointDist.y, normalizedPoint.y);
+ var mockObject = new AbstractCustomMap(model, options);
- normalizedPoint = mockObject.fromPixelsToPoint(pointDist, 3);
-
- assert.ok(normalizedPoint);
- assert.equal(pointDist.x, normalizedPoint.x);
- assert.equal(pointDist.y, normalizedPoint.y);
-
- });
-
- it("fromPixelsToPoint 3", function () {
- var model = helper.createModel();
- var options = helper.createCustomMapOptions();
-
- model.setWidth(512);
- model.setHeight(512);
- model.setMinZoom(0);
- model.setMaxZoom(3);
-
- var mockObject = new AbstractCustomMap(model, options);
-
- var pointDist = {
- x: 120,
- y: 140
- };
-
- var normalizedPoint = mockObject.fromPixelsToPoint(pointDist, 2);
+ var mapOptions = mockObject.createMapOptions();
+ assert.ok(mapOptions.center instanceof Point);
+ assert.ok(mapOptions.zoom);
+ });
- assert.ok(normalizedPoint);
- assert.equal(0.5 * pointDist.x, normalizedPoint.x);
- assert.equal(0.5 * pointDist.y, normalizedPoint.y);
+ it("backgroundOverlays", function () {
+ return ServerConnector.getProject().then(function (project) {
+ var model = project.getModels()[0];
- normalizedPoint = mockObject.fromPixelsToPoint(pointDist, 3);
+ var options = helper.createCustomMapOptions(project);
- assert.ok(normalizedPoint);
- assert.equal(0.25 * pointDist.x, normalizedPoint.x);
- assert.equal(0.25 * pointDist.y, normalizedPoint.y);
+ var mockObject = new AbstractCustomMap(model, options);
+ var mapOptions = mockObject.createMapOptions();
+ assert.ok(project.getDataOverlays().length > mapOptions.backgroundOverlays.length, "Too many background overlays");
+ });
+ });
});
it("registerMapClickEvents", function () {
var mockObject = helper.createAbstractCustomMap();
- var googleMap = new google.maps.Map(testDiv, {});
-
- mockObject.setGoogleMap(googleMap);
// mock function to not put error log on console
mockObject.getTopMap = function () {
return null;
@@ -228,81 +78,14 @@ describe('AbstractCustomMap', function () {
mockObject.registerMapClickEvents();
});
- it("latLngToTile", function () {
- var mockObject = helper.createAbstractCustomMap();
-
- var latLng = new google.maps.LatLng(0, 1);
-
- var tileCoordinates = mockObject.latLngToTile(latLng, 3);
- assert.ok(tileCoordinates);
- assert.ok(tileCoordinates instanceof google.maps.Point);
-
- });
-
- it("_turnOnOffDrawing", function () {
- var mockObject = helper.createAbstractCustomMap();
-
- var googleMap = new google.maps.Map(testDiv, {});
-
- mockObject.setGoogleMap(googleMap);
-
- // mock function to not put error log on console
- mockObject.getTopMap = function () {
- return null;
- };
-
- assert.equal(mockObject.isDrawingOn(), false);
- mockObject._turnOnOffDrawing();
- assert.ok(mockObject.isDrawingOn());
- mockObject._turnOnOffDrawing();
- assert.equal(mockObject.isDrawingOn(), false);
- });
-
- it("areaToString", function () {
- var mockObject = helper.createAbstractCustomMap();
-
- var triangleCoordinates = [new google.maps.LatLng(25.774, -80.190), new google.maps.LatLng(18.466, -66.118),
- new google.maps.LatLng(32.321, -64.757), new google.maps.LatLng(25.774, -80.190)];
-
- // Construct the polygon.
- var bermudaTriangle = new google.maps.Polygon({
- paths: triangleCoordinates,
- strokeColor: '#FF0000',
- strokeOpacity: 0.8,
- strokeWeight: 2,
- fillColor: '#FF0000',
- fillOpacity: 0.35
- });
-
- assert.ok(mockObject.areaToString(bermudaTriangle));
-
- });
-
- it("Point - Lat,Lng conversion", function () {
-
- var mockObject = helper.createAbstractCustomMap();
-
- var x = 19920;
- var y = 11040;
- var point = new google.maps.Point(x, y);
-
- var coordinates = mockObject.fromPointToLatLng(point);
-
- var point2 = mockObject.fromLatLngToPoint(coordinates);
-
- assert.closeTo(point2.x, point.x, 0.5, "X coordinate is invalid after transformation");
- assert.closeTo(point2.y, point.y, 0.5, "Y coordinate is invalid after transformation");
-
- });
-
it("_openInfoWindowForReaction", function () {
var mockObject = helper.createAbstractCustomMap();
- var reaction = helper.createReaction(mockObject);
+ var reaction = helper.createReaction(mockObject, true);
// mock the behaviour of the map
mockObject.getTopMap = function () {
- return mockObject;
+ return helper.createCustomMap();
};
mockObject.getOverlayDataForReaction = function () {
return Promise.resolve([]);
@@ -318,6 +101,49 @@ describe('AbstractCustomMap', function () {
});
+ describe("_openInfoWindowForAlias", function () {
+ it("default", function () {
+ var map = helper.createCustomMap();
+ var layout = helper.createOverlay();
+ var alias = helper.createAlias();
+ alias.setModelId(map.getId());
+ var layoutAlias = helper.createLayoutAlias();
+ layoutAlias.setId(alias.getId());
+
+ layout.addAlias(layoutAlias);
+
+ // create layout
+ map.getProject().addDataOverlay(layout, false);
+ map.getModel().addAlias(alias);
+ return map.init().then(function () {
+ var marker = map.getMapCanvas().createMarker({position: new Point(0, 0), icon: "empty.png"});
+
+ return map._openInfoWindowForAlias(alias, marker);
+ }).then(function () {
+ assert.ok(map.getAliasInfoWindowById(alias.getId()));
+ assert.ok(map.getAliasInfoWindowById(alias.getId()).isOpened());
+ });
+ });
+
+ it("for incomplete alias", function () {
+ var map, alias;
+ return ServerConnector.getProject().then(function (project) {
+ map = helper.createCustomMap(project);
+
+ return map.getModel().getAliasById(329171, false);
+ }).then(function (result) {
+ var marker = map.getMapCanvas().createMarker({position: new Point(0, 0), icon: "empty.png"});
+ alias = result;
+ assert.notOk(alias.isComplete());
+ return map._openInfoWindowForAlias(alias, marker);
+ }).then(function () {
+ assert.ok(map.getAliasInfoWindowById(alias.getId()));
+ assert.ok(map.getAliasInfoWindowById(alias.getId()).isOpened());
+ });
+ });
+ });
+
+
it("getDebug", function () {
var map = helper.createAbstractCustomMap();
map.setDebug(true);
@@ -325,39 +151,22 @@ describe('AbstractCustomMap', function () {
});
describe("fitBounds", function () {
- it("surface", function () {
+ it("alias", function () {
var map = helper.createCustomMap();
var alias = helper.createAlias(map);
- var ie = new IdentifiedElement(alias);
- var marker = new AliasMarker({
- map: map,
- element: ie
- });
- var surface = new AliasSurface({
- map: map,
- alias: alias,
- gmapObj: new google.maps.Rectangle({
- map: map.getGoogleMap(),
- bounds: new google.maps.LatLngBounds(new google.maps.LatLng(0, 0), new google.maps.LatLng(0.5, 1))
- })
- });
-
- var markers = [marker, surface];
- return marker.init().then(function () {
-
- var center = map.getGoogleMap().getCenter();
- map.fitBounds(markers);
- var center2 = map.getGoogleMap().getCenter();
- assert.ok(center.lat() !== center2.lat() || center.lng() !== center2.lng());
+ var center = map.getCenter();
+ return map.fitBounds([alias]).then(function () {
+ var center2 = map.getCenter();
+ assert.ok(center.x !== center2.x || center.y !== center2.y);
});
});
it("reaction", function () {
var map = helper.createCustomMap();
var reaction = helper.createReaction(map);
- var center = map.getGoogleMap().getCenter();
+ var center = map.getCenter();
return map.fitBounds([reaction]).then(function () {
- var center2 = map.getGoogleMap().getCenter();
- assert.ok(center.lat() !== center2.lat() || center.lng() !== center2.lng());
+ var center2 = map.getCenter();
+ assert.ok(center.x !== center2.x || center.y !== center2.y);
})
});
});
diff --git a/frontend-js/src/test/js/map/CustomMap-test.js b/frontend-js/src/test/js/map/CustomMap-test.js
index f2aac9e96cded5bf6715c33f0ca1a398ff6b8446..231b15f5b1f5f6dc87f48c45781e403a4c8dd39b 100644
--- a/frontend-js/src/test/js/map/CustomMap-test.js
+++ b/frontend-js/src/test/js/map/CustomMap-test.js
@@ -7,15 +7,16 @@ require("../mocha-config.js");
var AliasMarker = require('../../../main/js/map/marker/AliasMarker');
var AliasSurface = require('../../../main/js/map/surface/AliasSurface');
var Comment = require('../../../main/js/map/data/Comment');
+var ControlType = require('../../../main/js/map/ControlType');
var CustomMap = require('../../../main/js/map/CustomMap');
var IdentifiedElement = require('../../../main/js/map/data/IdentifiedElement');
var MapContextMenu = require('../../../main/js/gui/MapContextMenu');
var MolStar = require('../../../main/js/map/structure/MolStar');
+var Point = require('../../../main/js/map/canvas/Point');
var PointData = require('../../../main/js/map/data/PointData');
var PointMarker = require('../../../main/js/map/marker/PointMarker');
var ReactionMarker = require('../../../main/js/map/marker/ReactionMarker');
var ReactionSurface = require('../../../main/js/map/surface/ReactionSurface');
-var SelectionContextMenu = require('../../../main/js/gui/SelectionContextMenu');
var ServerConnector = require('./../ServerConnector-mock');
@@ -115,38 +116,44 @@ describe('CustomMap', function () {
});
it("with non background overlay", function () {
- var map = helper.createCustomMap();
+ var project = helper.createProject();
var layout = helper.createOverlay();
layout.setInitialized(true);
layout.setInputDataAvailable(true);
- map.getProject().addDataOverlay(layout);
+ project.addDataOverlay(layout);
var emptyBackground = helper.createOverlay();
emptyBackground.setInputDataAvailable(false);
emptyBackground.setName("Empty");
- map.getProject().addDataOverlay(emptyBackground);
+ project.addDataOverlay(emptyBackground);
+
+ var map = helper.createCustomMap(project);
+
return map.openDataOverlay(layout.getId()).then(function () {
- var backgroundId = ServerConnector.getSessionData(map.getProject()).getSelectedBackgroundOverlay();
+ var backgroundId = ServerConnector.getSessionData(project).getSelectedBackgroundOverlay();
assert.equal(backgroundId, emptyBackground.getId());
});
});
it("check backgroundChangeListener", function () {
- var map = helper.createCustomMap();
+ var project = helper.createProject();
var overlay = helper.createOverlay();
overlay.setInitialized(true);
overlay.setInputDataAvailable(true);
- map.getProject().addDataOverlay(overlay);
+ project.addDataOverlay(overlay);
+
var overlay2 = helper.createOverlay();
overlay2.setInitialized(true);
overlay2.setInputDataAvailable(true);
- map.getProject().addDataOverlay(overlay2);
+ project.addDataOverlay(overlay2);
var emptyBackground = helper.createOverlay();
emptyBackground.setInputDataAvailable(false);
emptyBackground.setName("Empty");
- map.getProject().addDataOverlay(emptyBackground);
+ project.addDataOverlay(emptyBackground);
+
+ var map = helper.createCustomMap(project);
var counter = 0;
map.addListener("onBackgroundOverlayChange", function () {
@@ -192,7 +199,8 @@ describe('CustomMap', function () {
assert.ok(map.selectedLayoutOverlays[layout.getId()][1] instanceof ReactionSurface);
// now hide the layout
- map._hideSelectedLayout(layout.getId());
+ return map._hideSelectedLayout(layout.getId());
+ }).then(function () {
assert.ok(map.selectedLayoutOverlays[layout.getId()]);
assert.equal(0, map.selectedLayoutOverlays[layout.getId()].length);
});
@@ -226,7 +234,9 @@ describe('CustomMap', function () {
assert.equal(0, emptySubmap.selectedLayoutOverlays[overlayId].length);
// now hide the layout
- customMap.hideSelectedLayout(overlayId);
+
+ return customMap.hideSelectedLayout(overlayId);
+ }).then(function () {
assert.equal(0, customMap.selectedLayoutOverlays[overlayId].length);
assert.equal(0, filledSubmap.selectedLayoutOverlays[overlayId].length);
assert.equal(0, emptySubmap.selectedLayoutOverlays[overlayId].length);
@@ -261,58 +271,67 @@ describe('CustomMap', function () {
});
});
- });
+ it("check if info window content changed", function () {
+ var project = helper.createProject();
+ var layout = helper.createOverlay();
+ layout.setInitialized(true);
+ layout.setInputDataAvailable(true);
+ project.addDataOverlay(layout);
- it("hideDataOverlay", function () {
- var map = helper.createCustomMap();
- var layout = helper.createOverlay();
- layout.setInitialized(true);
- layout.setInputDataAvailable(true);
- map.getProject().addDataOverlay(layout);
+ var map = helper.createCustomMap(project);
- return map.openDataOverlay(layout.getId()).then(function () {
- return map.hideDataOverlay(layout.getId());
- }).then(function () {
- var vLayouts = ServerConnector.getSessionData(map.getProject()).getVisibleOverlays();
- assert.equal(0, vLayouts.length);
+ var alias = helper.createAlias(map);
+ var ie = helper.createIdentifiedElement(alias);
+ var marker = map.getMapCanvas().createMarker({icon: "empty.png", position: new Point(0, 0)});
+ var infoWindow;
+ return map.openInfoWindowForIdentifiedElement(ie, marker).then(function (result) {
+ infoWindow = result;
+ assert.notOk(infoWindow.getContent().innerHTML.indexOf(layout.getName()) >= 0);
+ return map.openDataOverlay(layout.getId());
+ }).then(function () {
+ assert.ok(infoWindow.getContent().innerHTML.indexOf(layout.getName()) >= 0);
+ assert.equal(logger.getErrors().length, 0);
+ });
});
});
- describe("openInfoWindowForAlias", function () {
+ describe("hideDataOverlay", function () {
it("default", function () {
var map = helper.createCustomMap();
var layout = helper.createOverlay();
- var alias = helper.createAlias();
- alias.setModelId(map.getId());
- var layoutAlias = helper.createLayoutAlias();
- layoutAlias.setId(alias.getId());
-
- layout.addAlias(layoutAlias);
-
- // create layout
+ layout.setInitialized(true);
+ layout.setInputDataAvailable(true);
map.getProject().addDataOverlay(layout);
- map.getModel().addAlias(alias);
- return map.openInfoWindowForAlias(alias).then(function () {
- assert.ok(map.getAliasInfoWindowById(alias.getId()));
- assert.ok(map.getAliasInfoWindowById(alias.getId()).isOpened());
+ return map.openDataOverlay(layout.getId()).then(function () {
+ return map.hideDataOverlay(layout.getId());
+ }).then(function () {
+ var vLayouts = ServerConnector.getSessionData(map.getProject()).getVisibleOverlays();
+ assert.equal(0, vLayouts.length);
});
});
+ it("check if info window content changed", function () {
+ var project = helper.createProject();
+ var layout = helper.createOverlay();
+ layout.setInitialized(true);
+ layout.setInputDataAvailable(true);
+ project.addDataOverlay(layout);
- it("for incomplete alias", function () {
- var map, alias;
- return ServerConnector.getProject().then(function (project) {
- var options = helper.createCustomMapOptions(project);
- map = new CustomMap(options);
+ var map = helper.createCustomMap(project);
- return map.getModel().getAliasById(329171, false);
- }).then(function (result) {
- alias = result;
- assert.notOk(alias.isComplete());
- return map.openInfoWindowForAlias(alias);
+ var alias = helper.createAlias(map);
+ var ie = helper.createIdentifiedElement(alias);
+ var marker = map.getMapCanvas().createMarker({icon: "empty.png", position: new Point(0, 0)});
+ var infoWindow;
+ return map.openInfoWindowForIdentifiedElement(ie, marker).then(function (result) {
+ infoWindow = result;
+ return map.openDataOverlay(layout.getId());
}).then(function () {
- assert.ok(map.getAliasInfoWindowById(alias.getId()));
- assert.ok(map.getAliasInfoWindowById(alias.getId()).isOpened());
+ assert.ok(infoWindow.getContent().innerHTML.indexOf(layout.getName()) >= 0);
+ return map.hideDataOverlay(layout.getId());
+ }).then(function () {
+ assert.notOk(infoWindow.getContent().innerHTML.indexOf(layout.getName()) >= 0);
+ assert.equal(logger.getErrors().length, 0);
});
});
});
@@ -460,7 +479,6 @@ describe('CustomMap', function () {
element.setIcon("icon");
return Promise.resolve([element]);
};
-
return map.renderOverlayCollection({
overlayCollection: oc
}).then(function () {
@@ -516,11 +534,12 @@ describe('CustomMap', function () {
map.getModel().addReaction(reaction);
var ie = helper.createIdentifiedElement(reaction);
+ var marker = map.getMapCanvas().createMarker({icon: "empty.png", position: new Point(0, 0)});
var infoWindow = map.getInfoWindowForIdentifiedElement(ie);
assert.equal(null, infoWindow);
- return map._openInfoWindowForReaction(reaction).then(function () {
+ return map.openInfoWindowForIdentifiedElement(ie, marker).then(function () {
infoWindow = map.getInfoWindowForIdentifiedElement(ie);
assert.ok(infoWindow);
@@ -537,13 +556,16 @@ describe('CustomMap', function () {
}));
return map.getContextMenu().init().then(function () {
- var mev = {
+ var data = {
stop: null,
- latLng: new google.maps.LatLng(40.0, -90.0)
+ point: new Point(10.0, 20.0)
};
assert.notOk(map.getActiveSubmapId());
- return google.maps.event.trigger(map.getGoogleMap(), 'rightclick', mev);
+ return map.triggerEvent("map-rightclick", data);
+ }).then(function () {
+ //we need to wait because some implementations don't use promises...
+ return Promise.delay(100);
}).then(function () {
assert.equal(map.getId(), map.getActiveSubmapId());
return map.destroy();
@@ -558,16 +580,17 @@ describe('CustomMap', function () {
map = helper.createCustomMap(project);
searchOverlay = helper.createSearchDbOverlay(map);
- var mev = {
+ var data = {
stop: null,
- latLng: new google.maps.LatLng(82.32061703407554, -167.25586206896548)
+ point: new Point(184.79, 365.76)
};
- map.getGoogleMap().setZoom(4);
- // latLng : new google.maps.LatLng(82.40238643645326, -148.44758620689652)
+ map.setZoom(4);
assert.notOk(map.getActiveSubmapId());
- return google.maps.event.trigger(map.getGoogleMap(), 'click', mev);
-
+ return map.triggerEvent("map-click", data);
+ }).then(function () {
+ //we need to wait because some implementations don't use promises...
+ return Promise.delay(100);
}).then(function () {
assert.equal(map.getId(), map.getActiveSubmapId());
var element = new IdentifiedElement({id: 329171, type: "ALIAS", modelId: map.getId()});
@@ -583,14 +606,17 @@ describe('CustomMap', function () {
map = helper.createCustomMap(project);
searchOverlay = helper.createSearchDbOverlay(map);
- var mev = {
+ var data = {
stop: null,
- latLng: new google.maps.LatLng(82.40238643645326, -148.44758620689652)
+ point: new Point(457.51, 356.84)
};
- map.getGoogleMap().setZoom(4);
+ map.setZoom(4);
assert.notOk(map.getActiveSubmapId());
- return google.maps.event.trigger(map.getGoogleMap(), 'click', mev);
+ return map.triggerEvent("map-click", data);
+ }).then(function () {
+ //we need to wait because some implementations don't use promises...
+ return Promise.delay(100);
}).then(function () {
assert.equal(map.getId(), map.getActiveSubmapId());
@@ -606,60 +632,6 @@ describe('CustomMap', function () {
});
});
- it("create polygon through drawingManager", function () {
- var map = helper.createCustomMap();
-
- map.setSelectionContextMenu(new SelectionContextMenu({
- customMap: map,
- element: testDiv
- }));
-
- map.turnOnDrawing();
-
- var triangleCoordinates = [new google.maps.LatLng(25.774, -80.190), new google.maps.LatLng(18.466, -66.118),
- new google.maps.LatLng(32.321, -64.757), new google.maps.LatLng(25.774, -80.190)];
-
- // Construct the polygon.
- var bermudaTriangle = new google.maps.Polygon({
- paths: triangleCoordinates,
- strokeColor: '#FF0000',
- strokeOpacity: 0.8,
- strokeWeight: 2,
- fillColor: '#FF0000',
- fillOpacity: 0.35
- });
- bermudaTriangle.setMap(map.getGoogleMap());
-
- var eventParam = {
- type: google.maps.drawing.OverlayType.POLYGON,
- overlay: bermudaTriangle
- };
-
- // check creation complete behaviour
- assert.ok(map.isDrawingOn());
- assert.equal(google.maps.drawing.OverlayType.POLYGON, map._drawingManager.getDrawingMode());
- google.maps.event.trigger(map._drawingManager, 'overlaycomplete', eventParam);
- assert.ok(map.isDrawingOn());
- assert.equal(null, map._drawingManager.getDrawingMode());
-
- // and now check how it behaves when we click on the polygon
- var clickEventParam = {
- stop: null,
- latLng: new google.maps.LatLng(40.0, -90.0)
- };
-
- assert.notOk(map.getSelectedPolygon());
-
- assert.notOk(map.getActiveSubmapId());
- assert.notOk(map.getSelectedArea());
- google.maps.event.trigger(bermudaTriangle, 'rightclick', clickEventParam);
- assert.ok(map.getSelectedArea());
- assert.equal(map.getId(), map.getActiveSubmapId());
-
- assert.ok(map.getSelectedPolygon());
-
- });
-
it("getAliasVisibleLayoutsData", function () {
var mockObject = helper.createCustomMap();
@@ -680,14 +652,14 @@ describe('CustomMap', function () {
it("changed coordinates in map", function () {
var map = helper.createCustomMap();
- var oldCenter = map.getGoogleMap().getCenter();
- var newCenter = new google.maps.LatLng(3, 87);
- map.getGoogleMap().setCenter(newCenter);
- google.maps.event.trigger(map.getGoogleMap(), "center_changed");
+ var oldCenter = map.getCenter();
+ var newCenter = new Point(3, 87);
+ map.setCenter(newCenter);
+ map.triggerEvent("map-center_changed");
var center = ServerConnector.getSessionData(map.getProject()).getCenter(map.getModel());
assert.ok(center !== oldCenter);
- assert.ok(center instanceof google.maps.Point);
+ assert.ok(center instanceof Point);
});
it("refreshComments", function () {
@@ -742,7 +714,7 @@ describe('CustomMap', function () {
var map = helper.createCustomMap();
map.getModel().setId(15781);
map.setActiveSubmapId(15781);
- map.setActiveSubmapClickCoordinates(new google.maps.Point(2, 12));
+ map.setActiveSubmapClickCoordinates(new Point(2, 12));
return map.openCommentDialog().then(function () {
var types = map.getCommentDialog().getTypes();
assert.equal(types.length, 6);
@@ -767,7 +739,7 @@ describe('CustomMap', function () {
map = helper.createCustomMap(project);
helper.createCommentDbOverlay(map);
map.setActiveSubmapId(map.getId());
- map.setActiveSubmapClickCoordinates(new google.maps.Point(2, 12));
+ map.setActiveSubmapClickCoordinates(new Point(2, 12));
return map.openCommentDialog();
}).then(function () {
return map.getCommentDialog().addComment();
@@ -782,7 +754,7 @@ describe('CustomMap', function () {
map = helper.createCustomMap(project);
helper.createCommentDbOverlay(map);
map.setActiveSubmapId(map.getId());
- map.setActiveSubmapClickCoordinates(new google.maps.Point(2, 12));
+ map.setActiveSubmapClickCoordinates(new Point(2, 12));
return map.openCommentDialog();
}).then(function () {
var dialog = map.getCommentDialog();
@@ -854,7 +826,7 @@ describe('CustomMap', function () {
var map = new CustomMap(options);
- map.setCenter(new google.maps.LatLng(10, 20));
+ map.setCenter(new Point(10, 20));
assert.ok(ServerConnector.getSessionData().getCenter(map.getModel()));
});
@@ -866,7 +838,8 @@ describe('CustomMap', function () {
var map = new CustomMap(options);
map.openSubmap(submodel.getId());
- map.setCenter(new google.maps.LatLng(10, 20));
+ var submap = map.getSubmapById(submodel.getId());
+ submap.setCenter(new Point(10, 20));
assert.ok(ServerConnector.getSessionData().getCenter(submodel));
map.destroy();
});
@@ -895,18 +868,6 @@ describe('CustomMap', function () {
}
});
- it("removeSelection", function () {
- var options = helper.createCustomMapOptions();
-
- var map = new CustomMap(options);
- map.setActiveSubmapId(map.getId());
- map.setSelectedArea(new google.maps.Rectangle({}));
-
- map.removeSelection();
- assert.equal(map.getSelectedArea(), null);
- });
-
-
describe("_openInfoWindowForIdentifiedElement", function () {
it("for AliasMarker", function () {
var map;
@@ -964,7 +925,7 @@ describe('CustomMap', function () {
return Promise.resolve([]);
};
- var point = new google.maps.Point(2, 3.45);
+ var point = new Point(2, 3.45);
var pointData = new PointData(point, mockObject.getId());
var pointMarker = new PointMarker({
@@ -1043,4 +1004,14 @@ describe('CustomMap', function () {
});
});
});
+ describe("logo link", function () {
+ it("left logo click", function () {
+ var map = helper.createCustomMap();
+ return map.getControl(ControlType.LOGO_2_IMG).onclick()
+ });
+ it("right logo click", function () {
+ var map = helper.createCustomMap();
+ return map.getControl(ControlType.LOGO_IMG).onclick()
+ });
+ });
});
diff --git a/frontend-js/src/test/js/map/CustomMapOptions-test.js b/frontend-js/src/test/js/map/CustomMapOptions-test.js
index d21987ba7feff8243ec0bd139f91ef6e6b3693b9..78da4e62bf725e81c170abbb531de45e7cef548a 100644
--- a/frontend-js/src/test/js/map/CustomMapOptions-test.js
+++ b/frontend-js/src/test/js/map/CustomMapOptions-test.js
@@ -11,10 +11,8 @@ describe('CustomMapOptions', function () {
it("with invalid arg", function () {
try {
new CustomMapOptions({
- markerOptimization: 12,
bigLogo: "some strange string",
hideDiv: "some div ide",
- customTouchInterface: "strange param",
debug: "unk boolean"
});
assert.ok(false);
diff --git a/frontend-js/src/test/js/map/Submap-test.js b/frontend-js/src/test/js/map/Submap-test.js
index a3409131ffbeeceaae80a956fe4e616a13f27154..a312d46dafb5a2ebc59cc72c9708fceb36a75377 100644
--- a/frontend-js/src/test/js/map/Submap-test.js
+++ b/frontend-js/src/test/js/map/Submap-test.js
@@ -61,6 +61,8 @@ describe('Submap', function () {
return ServerConnector.getProject(projectId).then(function (project) {
map = helper.createCustomMap(project);
submap = map.getSubmapById(16729);
+ return submap.open(testDiv);
+ }).then(function () {
return submap.getModel().getAliasById(345330);
}).then(function (alias) {
marker = new AliasMarker({
@@ -70,6 +72,8 @@ describe('Submap', function () {
return marker.init();
}).then(function () {
assert.ok(marker.getAliasData());
+ }).finally(function(){
+ return submap.destroy();
});
});
});
diff --git a/frontend-js/src/test/js/map/canvas/Bounds-test.js b/frontend-js/src/test/js/map/canvas/Bounds-test.js
new file mode 100644
index 0000000000000000000000000000000000000000..255af1c557a453d9f28a3523ec61276753f1e55c
--- /dev/null
+++ b/frontend-js/src/test/js/map/canvas/Bounds-test.js
@@ -0,0 +1,74 @@
+"use strict";
+require("../../mocha-config");
+
+// noinspection JSUnusedLocalSymbols
+var logger = require('../../logger');
+
+var Bounds = require('../../../../main/js/map/canvas/Bounds');
+var Point = require('../../../../main/js/map/canvas/Point');
+
+var chai = require('chai');
+var assert = chai.assert;
+
+describe('Bounds', function () {
+ describe("constructor", function () {
+ it("default", function () {
+ var bounds = new Bounds();
+ assert.ok(bounds);
+ });
+ it("with single point", function () {
+ var p1 = new Point(0, 0);
+ var bounds = new Bounds(p1);
+ assert.ok(bounds);
+ });
+ it("with two points", function () {
+ var p1 = new Point(0, 0);
+ var p2 = new Point(10, 10);
+ var bounds = new Bounds(p1, p2);
+ assert.ok(bounds);
+ });
+ });
+ it("getTopLeft", function () {
+ var p1 = new Point(2, 5);
+ var bounds = new Bounds(p1);
+ assert.ok(bounds.getTopLeft().x === p1.x);
+ assert.ok(bounds.getTopLeft().y === p1.y);
+ });
+
+ it("getRightBottom", function () {
+ var p1 = new Point(2, 5);
+ var bounds = new Bounds(p1);
+ assert.ok(bounds.getRightBottom().x === p1.x);
+ assert.ok(bounds.getRightBottom().y === p1.y);
+ });
+
+ describe("contains", function () {
+ it("point inside", function () {
+ var p1 = new Point(0, 0);
+ var p2 = new Point(10, 10);
+ var bounds = new Bounds(p1, p2);
+ var inside = new Point(5, 8);
+
+ assert.ok(bounds.contains(inside));
+ });
+ it("point on border", function () {
+ var p1 = new Point(0, 0);
+ var p2 = new Point(10, 10);
+ var bounds = new Bounds(p1, p2);
+
+ assert.ok(bounds.contains(p1));
+ assert.ok(bounds.contains(p2));
+ });
+ it("point on outside", function () {
+ var p1 = new Point(0, 0);
+ var p2 = new Point(10, 10);
+ var bounds = new Bounds(p1, p2);
+
+ assert.notOk(bounds.contains(new Point(-1, 5)));
+ assert.notOk(bounds.contains(new Point(11, 5)));
+ assert.notOk(bounds.contains(new Point(5, -1)));
+ assert.notOk(bounds.contains(new Point(5, 11)));
+ });
+ });
+
+});
diff --git a/frontend-js/src/test/js/map/canvas/GoogleMaps/GoogleMapsApiCanvas-test.js b/frontend-js/src/test/js/map/canvas/GoogleMaps/GoogleMapsApiCanvas-test.js
new file mode 100644
index 0000000000000000000000000000000000000000..c124fc6299958307da779338bfff02bfe6e04a3b
--- /dev/null
+++ b/frontend-js/src/test/js/map/canvas/GoogleMaps/GoogleMapsApiCanvas-test.js
@@ -0,0 +1,201 @@
+"use strict";
+require("../../../mocha-config");
+
+// noinspection JSUnusedLocalSymbols
+var logger = require('../../../logger');
+
+var GoogleMapsApiCanvas = require('../../../../../main/js/map/canvas/GoogleMaps/GoogleMapsApiCanvas');
+var Point = require('../../../../../main/js/map/canvas/Point');
+
+var SelectionContextMenu = require('../../../../../main/js/gui/SelectionContextMenu');
+
+var chai = require('chai');
+var assert = chai.assert;
+
+describe('GoogleMapsApiCanvas', function () {
+ var testOptions = {
+ center: new Point(0, 0),
+ tileSize: 256,
+ width: 300,
+ height: 600,
+ backgroundOverlays: [{
+ id: 1,
+ name: "overlay",
+ directory: "overlay_dir"
+ }]
+ };
+ it("constructor", function () {
+ var canvas = new GoogleMapsApiCanvas(testDiv, testOptions);
+ assert.ok(canvas.pixelOrigin_);
+ assert.ok(canvas.pixelsPerLonDegree_);
+ assert.ok(canvas.pixelsPerLonRadian_);
+ assert.ok(canvas.zoomFactor);
+
+ });
+
+ it("centerButton", function () {
+ var canvas = new GoogleMapsApiCanvas(testDiv, testOptions);
+ return canvas.getGoogleMap().controls[google.maps.ControlPosition.RIGHT_TOP][0].firstChild.onclick();
+ });
+
+ it("latLngToTile", function () {
+ var canvas = new GoogleMapsApiCanvas(testDiv, testOptions);
+
+ var latLng = new google.maps.LatLng(0, 1);
+
+ var tileCoordinates = canvas.latLngToTile(latLng, 3);
+ assert.ok(tileCoordinates);
+ assert.ok(tileCoordinates instanceof Point);
+
+ });
+
+ describe("createMapTypeOption", function () {
+ it("default", function () {
+ var canvas = new GoogleMapsApiCanvas(testDiv, testOptions);
+
+ var overlayDataObj = testOptions.backgroundOverlays[0];
+
+ var result = canvas.createMapTypeOption(overlayDataObj);
+
+ assert.ok(result);
+
+ });
+ it("getTileUrl", function () {
+ var coordinates = {x: 0, y: 0};
+ var canvas = new GoogleMapsApiCanvas(testDiv, testOptions);
+
+ var overlayDataObj = testOptions.backgroundOverlays[0];
+
+ var typeOptions = canvas.createMapTypeOption(overlayDataObj);
+ var url = typeOptions.getTileUrl(coordinates, 3);
+ assert.ok(url);
+ assert.ok(url.indexOf(coordinates.x) >= 0);
+ assert.ok(url.indexOf(coordinates.y) >= 0);
+ });
+ });
+
+
+ it("Point - Lat,Lng conversion", function () {
+
+ var canvas = new GoogleMapsApiCanvas(testDiv, testOptions);
+
+ var x = 199;
+ var y = 110;
+ var point = new Point(x, y);
+
+ var coordinates = canvas.fromPointToLatLng(point);
+
+ var point2 = canvas.fromLatLngToPoint(coordinates);
+
+ assert.closeTo(point2.x, point.x, 0.5, "X coordinate is invalid after transformation");
+ assert.closeTo(point2.y, point.y, 0.5, "Y coordinate is invalid after transformation");
+
+ });
+
+ it("create polygon through drawingManager", function () {
+ var project = helper.createProject({mapCanvasType: "GOOGLE_MAPS_API"});
+ var map = helper.createCustomMap(project);
+ var canvas = map.getMapCanvas();
+
+ map.setSelectionContextMenu(new SelectionContextMenu({
+ customMap: map,
+ element: testDiv
+ }));
+
+ canvas.turnOnDrawing();
+
+ var triangleCoordinates = [new google.maps.LatLng(25.774, -80.190), new google.maps.LatLng(18.466, -66.118),
+ new google.maps.LatLng(32.321, -64.757), new google.maps.LatLng(25.774, -80.190)];
+
+ // Construct the polygon.
+ var bermudaTriangle = new google.maps.Polygon({
+ paths: triangleCoordinates,
+ strokeColor: '#FF0000',
+ strokeOpacity: 0.8,
+ strokeWeight: 2,
+ fillColor: '#FF0000',
+ fillOpacity: 0.35
+ });
+ bermudaTriangle.setMap(canvas.getGoogleMap());
+
+ var eventParam = {
+ type: google.maps.drawing.OverlayType.POLYGON,
+ overlay: bermudaTriangle
+ };
+
+ // check creation complete behaviour
+ assert.ok(canvas.isDrawingOn());
+ assert.equal(google.maps.drawing.OverlayType.POLYGON, canvas._drawingManager.getDrawingMode());
+ google.maps.event.trigger(canvas._drawingManager, 'overlaycomplete', eventParam);
+ assert.ok(canvas.isDrawingOn());
+ assert.equal(null, canvas._drawingManager.getDrawingMode());
+
+ // and now check how it behaves when we click on the polygon
+ var clickEventParam = {
+ stop: null,
+ latLng: new google.maps.LatLng(40.0, -90.0)
+ };
+
+ assert.notOk(map.getSelectedPolygon());
+
+ assert.notOk(map.getActiveSubmapId());
+ assert.notOk(canvas.getSelectedArea());
+ google.maps.event.trigger(bermudaTriangle, 'rightclick', clickEventParam);
+ assert.ok(canvas.getSelectedArea());
+ assert.equal(map.getId(), map.getActiveSubmapId());
+
+ assert.ok(map.getSelectedPolygon());
+
+ });
+
+ it("toggleDrawing", function () {
+ var canvas = new GoogleMapsApiCanvas(testDiv, testOptions);
+
+ assert.equal(canvas.isDrawingOn(), false);
+ canvas.toggleDrawing();
+ assert.ok(canvas.isDrawingOn());
+ canvas.toggleDrawing();
+ assert.equal(canvas.isDrawingOn(), false);
+ });
+
+ it("turnOnOff", function () {
+ var canvas = new GoogleMapsApiCanvas(testDiv, testOptions);
+
+ assert.equal(canvas.isDrawingOn(), false);
+ canvas.turnOnDrawing();
+ assert.ok(canvas.isDrawingOn());
+ canvas.turnOffDrawing();
+ assert.equal(canvas.isDrawingOn(), false);
+ });
+
+ it("areaToString", function () {
+ var canvas = new GoogleMapsApiCanvas(testDiv, testOptions);
+
+ var triangleCoordinates = [new google.maps.LatLng(25.774, -80.190), new google.maps.LatLng(18.466, -66.118),
+ new google.maps.LatLng(32.321, -64.757), new google.maps.LatLng(25.774, -80.190)];
+
+ // Construct the polygon.
+ var bermudaTriangle = new google.maps.Polygon({
+ paths: triangleCoordinates,
+ strokeColor: '#FF0000',
+ strokeOpacity: 0.8,
+ strokeWeight: 2,
+ fillColor: '#FF0000',
+ fillOpacity: 0.35
+ });
+
+ assert.ok(canvas.areaToString(bermudaTriangle));
+
+ });
+
+ it("removeSelection", function () {
+ var project = helper.createProject({mapCanvasType: "GOOGLE_MAPS_API"});
+ var map = helper.createCustomMap(project);
+ map.setActiveSubmapId(map.getId());
+ map.getMapCanvas().setSelectedArea(new google.maps.Rectangle({}));
+
+ map.removeSelection();
+ assert.equal(map.getMapCanvas().getSelectedArea(), null);
+ });
+
+});
diff --git a/frontend-js/src/test/js/map/canvas/GoogleMaps/GoogleMapsApiInfoWindow-test.js b/frontend-js/src/test/js/map/canvas/GoogleMaps/GoogleMapsApiInfoWindow-test.js
new file mode 100644
index 0000000000000000000000000000000000000000..89fb1049bb1e09f85c70228c509c9fcf025ae75f
--- /dev/null
+++ b/frontend-js/src/test/js/map/canvas/GoogleMaps/GoogleMapsApiInfoWindow-test.js
@@ -0,0 +1,22 @@
+"use strict";
+require("../../../mocha-config");
+
+var logger = require('../../../logger');
+
+var GoogleMapsApiInfoWindow = require('../../../../../main/js/map/canvas/GoogleMaps/GoogleMapsApiInfoWindow');
+var Point = require('../../../../../main/js/map/canvas/Point');
+
+var chai = require('chai');
+var assert = chai.assert;
+
+describe('GoogleMapsApiInfoWindow', function () {
+
+ it("setMarker", function () {
+ var canvas = helper.createGoogleCanvas();
+
+ var marker = canvas.createMarker({position: new Point(0,0)});
+ var infoWindow = canvas.createInfoWindow({position: new Point(0,0)});
+
+ infoWindow.setMarker(marker);
+ });
+});
diff --git a/frontend-js/src/test/js/map/canvas/MapCanvas-test.js b/frontend-js/src/test/js/map/canvas/MapCanvas-test.js
new file mode 100644
index 0000000000000000000000000000000000000000..06bf740aa7a49ff9744224c21e88130e9175f9ae
--- /dev/null
+++ b/frontend-js/src/test/js/map/canvas/MapCanvas-test.js
@@ -0,0 +1,36 @@
+"use strict";
+require("../../mocha-config");
+
+var MapCanvas = require('../../../../main/js/map/canvas/MapCanvas');
+
+var chai = require('chai');
+var assert = chai.assert;
+
+describe('MapCanvas', function () {
+ it("test existence of abstract methods", function () {
+
+ var canvas = new MapCanvas(testDiv, {
+ tileSize: 256,
+ minZoom: 2,
+ height: 600,
+ width: 800
+ });
+ assert.ok(canvas.createMarker);
+ assert.ok(canvas.createInfoWindow);
+ assert.ok(canvas.createRectangle);
+ assert.ok(canvas.createPolyline);
+ assert.ok(canvas.addLeftBottomControl);
+ assert.ok(canvas.addRightBottomControl);
+ assert.ok(canvas.fitBounds);
+ assert.ok(canvas.setCenter);
+ assert.ok(canvas.getCenter);
+ assert.ok(canvas.getZoom);
+ assert.ok(canvas.getBackgroundId);
+ assert.ok(canvas.getSelectedArea);
+ assert.ok(canvas.getBounds);
+ assert.ok(canvas.setSelectedArea);
+ assert.ok(canvas.removeSelection);
+ assert.ok(canvas.triggerListeners);
+ });
+
+});
diff --git a/frontend-js/src/test/js/map/canvas/OpenLayers/OpenLayersCanvas-test.js b/frontend-js/src/test/js/map/canvas/OpenLayers/OpenLayersCanvas-test.js
new file mode 100644
index 0000000000000000000000000000000000000000..c647420709f1de9ff045bc16b52062503310e99f
--- /dev/null
+++ b/frontend-js/src/test/js/map/canvas/OpenLayers/OpenLayersCanvas-test.js
@@ -0,0 +1,143 @@
+"use strict";
+require("../../../mocha-config");
+
+// noinspection JSUnusedLocalSymbols
+var logger = require('../../../logger');
+
+var OpenLayerCanvas = require('../../../../../main/js/map/canvas/OpenLayers/OpenLayerCanvas');
+var Bounds = require('../../../../../main/js/map/canvas/Bounds');
+var Point = require('../../../../../main/js/map/canvas/Point');
+
+var SelectionContextMenu = require('../../../../../main/js/gui/SelectionContextMenu');
+
+var chai = require('chai');
+var assert = chai.assert;
+
+describe('OpenLayerCanvas', function () {
+ var testOptions = {
+ center: new Point(0, 0),
+ tileSize: 256,
+ width: 300,
+ height: 600,
+ zoom: 3,
+ minZoom: 2,
+ maxZoom: 10,
+ backgroundOverlays: [{
+ id: 1,
+ name: "overlay",
+ directory: "overlay_dir"
+ }]
+ };
+ it("constructor", function () {
+ var canvas = new OpenLayerCanvas(testDiv, testOptions);
+ assert.ok(canvas.pixelOrigin_);
+ assert.ok(canvas.pixelsPerLonDegree_);
+ assert.ok(canvas.pixelsPerLonRadian_);
+ assert.ok(canvas.zoomFactor);
+
+ });
+
+ it("Point - Projection conversion", function () {
+ var canvas = new OpenLayerCanvas(testDiv, testOptions);
+
+ var x = 199;
+ var y = 110;
+ var point = new Point(x, y);
+
+ var coordinates = canvas.fromPointToProjection(point);
+
+ var point2 = canvas.fromProjectionToPoint(coordinates);
+
+ assert.closeTo(point2.x, point.x, 0.5, "X coordinate is invalid after transformation");
+ assert.closeTo(point2.y, point.y, 0.5, "Y coordinate is invalid after transformation");
+
+ });
+
+ it("setCenter", function () {
+ var canvas = new OpenLayerCanvas(testDiv, testOptions);
+
+ var point = new Point(199, 110);
+ canvas.setCenter(point);
+ var point2 = canvas.getCenter();
+
+ assert.closeTo(point2.x, point.x, 0.5, "X coordinate is not correct");
+ assert.closeTo(point2.y, point.y, 0.5, "Y coordinate is not correct");
+
+ });
+
+ it("setZoom", function () {
+ var canvas = new OpenLayerCanvas(testDiv, testOptions);
+
+ canvas.setZoom(5);
+ var zoom = canvas.getZoom();
+
+ assert.equal(zoom, 5, "zoom is incorrect");
+
+ });
+
+ it("getBounds", function () {
+ var canvas = new OpenLayerCanvas(testDiv, testOptions);
+ //set size of the map in DOM
+ canvas.getOpenLayersMap().setSize([800, 600]);
+
+ var bounds = canvas.getBounds(5);
+ assert.ok(bounds instanceof Bounds);
+
+ });
+
+ describe("fitBounds", function () {
+ it("part of map", function () {
+ var canvas = new OpenLayerCanvas(testDiv, testOptions);
+ //set size of the map in DOM
+ canvas.getOpenLayersMap().setSize([800, 600]);
+
+ var p1 = new Point(10, 10);
+ var p2 = new Point(20, 10);
+ var bounds = new Bounds(p1, p2);
+
+ canvas.fitBounds(bounds);
+
+ var mapBounds = canvas.getBounds();
+
+ assert.ok(mapBounds.contains(p1));
+ assert.ok(mapBounds.contains(p2));
+ assert.notOk(mapBounds.contains(new Point(0, 0)) && mapBounds.contains(new Point(canvas.getWidth(), canvas.getHeight())));
+
+ });
+ it("full map", function () {
+ var canvas = new OpenLayerCanvas(testDiv, testOptions);
+ //set size of the map in DOM
+ canvas.getOpenLayersMap().setSize([800, 600]);
+
+ var p1 = new Point(0, 0);
+ var p2 = new Point(canvas.getWidth(), canvas.getHeight());
+ var bounds = new Bounds(p1, p2);
+
+ canvas.fitBounds(bounds);
+
+ var mapBounds = canvas.getBounds();
+
+ assert.ok(mapBounds.contains(p1));
+ assert.ok(mapBounds.contains(p2));
+
+ });
+ });
+
+ it("featureToString", function () {
+ var canvas = new OpenLayerCanvas(testDiv, testOptions);
+ //set size of the map in DOM
+ canvas.getOpenLayersMap().setSize([800, 600]);
+
+ var feature = new ol.Feature({
+ geometry: new ol.geom.Polygon([[
+ canvas.fromPointToProjection(new Point(0, 10)),
+ canvas.fromPointToProjection(new Point(10, 10)),
+ canvas.fromPointToProjection(new Point(10, 0))
+ ]])
+ });
+
+ var polygon = canvas.featureToString(feature);
+ assert.ok(polygon);
+ });
+
+});
diff --git a/frontend-js/src/test/js/map/canvas/OpenLayers/OpenLayersInfoWindow-test.js b/frontend-js/src/test/js/map/canvas/OpenLayers/OpenLayersInfoWindow-test.js
new file mode 100644
index 0000000000000000000000000000000000000000..628d418c623af70616894c7982e895312748f29b
--- /dev/null
+++ b/frontend-js/src/test/js/map/canvas/OpenLayers/OpenLayersInfoWindow-test.js
@@ -0,0 +1,38 @@
+"use strict";
+require("../../../mocha-config");
+
+// noinspection JSUnusedLocalSymbols
+var logger = require('../../../logger');
+
+var OpenLayerCanvas = require('../../../../../main/js/map/canvas/OpenLayers/OpenLayerCanvas');
+var Point = require('../../../../../main/js/map/canvas/Point');
+
+var chai = require('chai');
+var assert = chai.assert;
+
+describe('OpenLayerInfoWindow', function () {
+ var testOptions = {
+ center: new Point(0, 0),
+ tileSize: 256,
+ width: 300,
+ height: 600,
+ zoom: 3,
+ minZoom: 2,
+ maxZoom: 10,
+ backgroundOverlays: [{
+ id: 1,
+ name: "overlay",
+ directory: "overlay_dir"
+ }]
+ };
+ it("hide when marker is hidden", function () {
+ var canvas = new OpenLayerCanvas(testDiv, testOptions);
+ var marker = canvas.createMarker({icon: "test.png", position: new Point(0, 0)});
+ var infoWindow = canvas.createInfoWindow({marker: marker, id: "1", position: new Point(0, 0)});
+ infoWindow.open();
+ assert.ok(infoWindow.isOpened());
+ return marker.hide().then(function () {
+ assert.notOk(infoWindow.isOpened());
+ });
+ });
+});
diff --git a/frontend-js/src/test/js/map/canvas/OpenLayers/OpenLayersMarker-test.js b/frontend-js/src/test/js/map/canvas/OpenLayers/OpenLayersMarker-test.js
new file mode 100644
index 0000000000000000000000000000000000000000..33f0ac581f6637237f27bd3f808098bf6c59e37d
--- /dev/null
+++ b/frontend-js/src/test/js/map/canvas/OpenLayers/OpenLayersMarker-test.js
@@ -0,0 +1,39 @@
+"use strict";
+require("../../../mocha-config");
+
+// noinspection JSUnusedLocalSymbols
+var logger = require('../../../logger');
+
+var OpenLayerCanvas = require('../../../../../main/js/map/canvas/OpenLayers/OpenLayerCanvas');
+var OpenLayerMarker = require('../../../../../main/js/map/canvas/OpenLayers/OpenLayerMarker');
+var Bounds = require('../../../../../main/js/map/canvas/Bounds');
+var Point = require('../../../../../main/js/map/canvas/Point');
+
+var SelectionContextMenu = require('../../../../../main/js/gui/SelectionContextMenu');
+
+var chai = require('chai');
+var assert = chai.assert;
+
+describe('OpenLayerMarker', function () {
+ var testOptions = {
+ center: new Point(0, 0),
+ tileSize: 256,
+ width: 300,
+ height: 600,
+ zoom: 3,
+ minZoom: 2,
+ maxZoom: 10,
+ backgroundOverlays: [{
+ id: 1,
+ name: "overlay",
+ directory: "overlay_dir"
+ }]
+ };
+ it("isShown", function () {
+ var canvas = new OpenLayerCanvas(testDiv, testOptions);
+ var marker = canvas.createMarker({icon:"test.png", position:new Point(0,0)});
+ assert.ok(marker.isShown());
+ marker.hide();
+ assert.notOk(marker.isShown());
+ });
+});
diff --git a/frontend-js/src/test/js/map/canvas/OpenLayers/OpenLayersRectangle-test.js b/frontend-js/src/test/js/map/canvas/OpenLayers/OpenLayersRectangle-test.js
new file mode 100644
index 0000000000000000000000000000000000000000..48cc4222e706dd74a9e03aaff2317372deaeb9e8
--- /dev/null
+++ b/frontend-js/src/test/js/map/canvas/OpenLayers/OpenLayersRectangle-test.js
@@ -0,0 +1,46 @@
+"use strict";
+require("../../../mocha-config");
+
+// noinspection JSUnusedLocalSymbols
+var logger = require('../../../logger');
+
+var OpenLayerCanvas = require('../../../../../main/js/map/canvas/OpenLayers/OpenLayerCanvas');
+var OpenLayerRectangle = require('../../../../../main/js/map/canvas/OpenLayers/OpenLayerRectangle');
+var Bounds = require('../../../../../main/js/map/canvas/Bounds');
+var Point = require('../../../../../main/js/map/canvas/Point');
+
+var SelectionContextMenu = require('../../../../../main/js/gui/SelectionContextMenu');
+
+var chai = require('chai');
+var assert = chai.assert;
+
+describe('OpenLayerRectangle', function () {
+ var testOptions = {
+ center: new Point(0, 0),
+ tileSize: 256,
+ width: 300,
+ height: 600,
+ zoom: 3,
+ minZoom: 2,
+ maxZoom: 10,
+ backgroundOverlays: [{
+ id: 1,
+ name: "overlay",
+ directory: "overlay_dir"
+ }]
+ };
+ it("isShown", function () {
+ var canvas = new OpenLayerCanvas(testDiv, testOptions);
+ var bounds = new Bounds(new Point(0,0), new Point(10,10));
+ var rectangle = canvas.createRectangle({
+ fillOpacity: 1,
+ strokeWeight: 1,
+ fillColor: "#00ff00",
+ bounds: bounds
+ });
+ rectangle.show();
+ assert.ok(rectangle.isShown());
+ rectangle.hide();
+ assert.notOk(rectangle.isShown());
+ });
+});
diff --git a/frontend-js/src/test/js/map/canvas/Point-test.js b/frontend-js/src/test/js/map/canvas/Point-test.js
new file mode 100644
index 0000000000000000000000000000000000000000..bcc946c1c81c0000db065072aa7c56d2200088cb
--- /dev/null
+++ b/frontend-js/src/test/js/map/canvas/Point-test.js
@@ -0,0 +1,32 @@
+"use strict";
+require("../../mocha-config");
+
+var logger = require('../../logger');
+
+var Point = require('../../../../main/js/map/canvas/Point');
+
+var chai = require('chai');
+var assert = chai.assert;
+
+describe('Point', function () {
+ describe("constructor", function () {
+ it("from coordinates", function () {
+ var point = new Point(12, 3);
+ assert.equal(12, point.x);
+ assert.equal(3, point.y);
+ });
+ it("from point", function () {
+ var point = new Point(12, 3);
+ var point2 = new Point(point);
+ assert.equal(point.x, point2.x);
+ assert.equal(point.y, point2.y);
+ });
+ it("from dictionary", function () {
+ var point = {x: 12, y: 3};
+ var point2 = new Point(point);
+ assert.equal(point.x, point2.x);
+ assert.equal(point.y, point2.y);
+ });
+ });
+
+});
diff --git a/frontend-js/src/test/js/map/data/IdentifiedElement-test.js b/frontend-js/src/test/js/map/data/IdentifiedElement-test.js
index 16d1c5c823ee95f523a63564cddce8392cec7037..511a360a8cda23f8700c1b4b43575eb2409d1803 100644
--- a/frontend-js/src/test/js/map/data/IdentifiedElement-test.js
+++ b/frontend-js/src/test/js/map/data/IdentifiedElement-test.js
@@ -5,6 +5,7 @@ require("../../mocha-config");
var IdentifiedElement = require('../../../../main/js/map/data/IdentifiedElement');
var Alias = require('../../../../main/js/map/data/Alias');
var Reaction = require('../../../../main/js/map/data/Reaction');
+var Point = require('../../../../main/js/map/canvas/Point');
var PointData = require('../../../../main/js/map/data/PointData');
var logger = require('../../logger');
@@ -97,6 +98,7 @@ describe('IdentifiedElement', function () {
modelId: 2
};
var code = function () {
+ // noinspection JSCheckFunctionSignatures
new IdentifiedElement(javaObject);
};
assert.throws(code, new RegExp("Type not defined"));
@@ -104,7 +106,7 @@ describe('IdentifiedElement', function () {
it("from PointData", function () {
var modelId = 3;
- var point = new google.maps.Point(2, 3.45);
+ var point = new Point(2, 3.45);
var pointData = new PointData(point, modelId);
var ie = new IdentifiedElement(pointData);
@@ -129,6 +131,7 @@ describe('IdentifiedElement', function () {
objectId: "el_id"
};
var code = function () {
+ // noinspection JSCheckFunctionSignatures
new IdentifiedElement(javaObject);
};
assert.throws(code, new RegExp("ModelId is invalid"));
@@ -149,7 +152,7 @@ describe('IdentifiedElement', function () {
var javaObject = {
type: "alias",
objectId: "el_id",
- modelId: "m_id"
+ modelId: 123
};
var ie = new IdentifiedElement(javaObject);
var point = ie.getPoint();
diff --git a/frontend-js/src/test/js/map/data/MapModel-test.js b/frontend-js/src/test/js/map/data/MapModel-test.js
index 7006c3f0e50864144aa65ddb94099d0670722f65..48e43e712d2dd4090c8220ef956bfa5a02689cc4 100644
--- a/frontend-js/src/test/js/map/data/MapModel-test.js
+++ b/frontend-js/src/test/js/map/data/MapModel-test.js
@@ -5,6 +5,7 @@ require("../../mocha-config");
var IdentifiedElement = require('../../../../main/js/map/data/IdentifiedElement');
var MapModel = require('../../../../main/js/map/data/MapModel');
var NetworkError = require('../../../../main/js/NetworkError');
+var Point = require('../../../../main/js/map/canvas/Point');
var PointData = require('../../../../main/js/map/data/PointData');
var ServerConnector = require('../../ServerConnector-mock');
@@ -56,8 +57,8 @@ describe('MapModel', function () {
it("getPointDataByPoint", function () {
var model = helper.createModel();
- var point = new google.maps.Point(2, 3.45);
- var point2 = new google.maps.Point(2, 3.45);
+ var point = new Point(2, 3.45);
+ var point2 = new Point(2, 3.45);
var data = model.getPointDataByPoint(point);
diff --git a/frontend-js/src/test/js/map/data/PointData-test.js b/frontend-js/src/test/js/map/data/PointData-test.js
index c7d0e85b6d607a0b2fe02f49e92ca78789a2aeeb..247d3c472ec4ae8033daffc61a9a095587dec3fa 100644
--- a/frontend-js/src/test/js/map/data/PointData-test.js
+++ b/frontend-js/src/test/js/map/data/PointData-test.js
@@ -2,6 +2,7 @@
require("../../mocha-config");
+var Point = require('../../../../main/js/map/canvas/Point');
var PointData = require('../../../../main/js/map/data/PointData');
var IdentifiedElement = require('../../../../main/js/map/data/IdentifiedElement');
var assert = require('assert');
@@ -9,12 +10,12 @@ var assert = require('assert');
describe('PointData', function() {
describe("constructor", function() {
it("from coordinates", function() {
- var point = new google.maps.Point(2, 3.45);
+ var point = new Point(2, 3.45);
var pointData = new PointData(point);
assert.ok(pointData);
assert.ok(pointData.getId());
assert.ok(pointData.getPoint());
- assert.ok(pointData.getPoint() instanceof google.maps.Point);
+ assert.ok(pointData.getPoint() instanceof Point);
});
it("from javaObj", function() {
diff --git a/frontend-js/src/test/js/map/data/Project-test.js b/frontend-js/src/test/js/map/data/Project-test.js
index 096507265855a634c631efc9882acbe97808b79f..033a8328cfe793289d71ab1c00e35e6390c58afe 100644
--- a/frontend-js/src/test/js/map/data/Project-test.js
+++ b/frontend-js/src/test/js/map/data/Project-test.js
@@ -89,4 +89,18 @@ describe('Project', function () {
});
});
+ it("getElementsPointingToSubmap", function () {
+ var project = new Project("{}");
+ var dataOverlay = helper.createOverlay();
+ var dataOverlay2 = helper.createOverlay();
+ dataOverlay2.setId(dataOverlay.getId());
+ project.addOrUpdateDataOverlay(dataOverlay);
+
+ var count = project.getDataOverlays().length;
+ project.addOrUpdateDataOverlay(dataOverlay2);
+ var count2 = project.getDataOverlays().length;
+
+ assert.equal(count, count2);
+ });
+
});
diff --git a/frontend-js/src/test/js/map/data/Reaction-test.js b/frontend-js/src/test/js/map/data/Reaction-test.js
index f6050668e56375d033ea4f1d16d809667288cc30..d32ae560278345548c4972272a18492b5cebfd14 100644
--- a/frontend-js/src/test/js/map/data/Reaction-test.js
+++ b/frontend-js/src/test/js/map/data/Reaction-test.js
@@ -42,7 +42,7 @@ describe('Reaction', function () {
var reaction = helper.createReaction();
var reaction2 = new Reaction(reaction);
assert.equal(reaction2.getId(), reaction.getId());
- assert.equal(reaction2.getCenter(), reaction.getCenter());
+ assert.deepEqual(reaction2.getCenter(), reaction.getCenter());
assert.equal(reaction2.getModelId(), reaction.getModelId());
assert.deepEqual(reaction2.getLines(), reaction.getLines());
assert.equal(logger.getWarnings().length, 0);
diff --git a/frontend-js/src/test/js/map/marker/AliasMarker-test.js b/frontend-js/src/test/js/map/marker/AliasMarker-test.js
index f7f10ead74c5b8aea29e9cefe937a41862f05b27..29ce5e52d017bd9bc424b19eeb0d0bd09a249b2c 100644
--- a/frontend-js/src/test/js/map/marker/AliasMarker-test.js
+++ b/frontend-js/src/test/js/map/marker/AliasMarker-test.js
@@ -48,14 +48,20 @@ describe('AliasMarker', function () {
map: map
});
var icon = "test.png";
- marker.addIcon("test.png");
- assert.equal(icon, marker.getIcon());
- marker.addIcon("test.png");
- assert.equal(icon, marker.getIcon());
- marker.removeIcon("test.png");
- assert.equal(icon, marker.getIcon());
- marker.removeIcon("test.png");
- assert.equal(undefined, marker.getIcon());
+ return marker.init().then(function () {
+ return marker.addIcon("test.png");
+ }).then(function () {
+ assert.equal(icon, marker.getIcon());
+ return marker.addIcon("test.png");
+ }).then(function () {
+ assert.equal(icon, marker.getIcon());
+ return marker.removeIcon("test.png");
+ }).then(function () {
+ assert.equal(icon, marker.getIcon());
+ return marker.removeIcon("test.png");
+ }).then(function () {
+ assert.equal(undefined, marker.getIcon());
+ });
});
it("click on marker", function () {
@@ -74,7 +80,7 @@ describe('AliasMarker', function () {
});
return marker.init();
}).then(function () {
- return google.maps.event.trigger(marker.getGoogleMarker(), "click");
+ return google.maps.event.trigger(marker.getMarker(), "click");
});
});
@@ -99,7 +105,7 @@ describe('AliasMarker', function () {
return marker.init();
}).then(function () {
- return google.maps.event.trigger(marker.getGoogleMarker(), "click");
+ return google.maps.event.trigger(marker.getMarker(), "click");
});
});
diff --git a/frontend-js/src/test/js/map/marker/MarkerSurfaceCollection-test.js b/frontend-js/src/test/js/map/marker/MarkerSurfaceCollection-test.js
index 305e899f76af426aef899262275e7beca5ddbd37..e892b67c67cd25ab7079270376bec5203e0b1562 100644
--- a/frontend-js/src/test/js/map/marker/MarkerSurfaceCollection-test.js
+++ b/frontend-js/src/test/js/map/marker/MarkerSurfaceCollection-test.js
@@ -81,11 +81,15 @@ describe('MarkerSurfaceCollection', function () {
});
return ServerConnector.getProject().then(function (project) {
submap = helper.createCustomMap(project).getSubmapById(16729);
+ return submap.open(testDiv);
+ }).then(function () {
collection = submap.getMarkerSurfaceCollection();
return collection.addMarker({element: element, icons: ["empty.png"]});
}).then(function (result) {
marker = result;
return marker.onClickHandler();
+ }).finally(function () {
+ return submap.destroy();
});
});
@@ -135,6 +139,8 @@ describe('MarkerSurfaceCollection', function () {
return ServerConnector.getProject(projectId).then(function (project) {
map = helper.createCustomMap(project);
submap = map.getSubmapById(16729);
+ return submap.open(testDiv);
+ }).then(function () {
var element = new IdentifiedElement({
modelId: submap.getId(),
@@ -148,6 +154,8 @@ describe('MarkerSurfaceCollection', function () {
}).then(function (surface) {
return surface.onClickHandler();
+ }).finally(function () {
+ return submap.destroy();
});
});
@@ -166,7 +174,7 @@ describe('MarkerSurfaceCollection', function () {
return collection.createSurfaceForDbOverlay(element, overlay);
}).then(function (result) {
marker1 = result;
- element.setColor("another.png");
+ element.setColor("#990099");
return collection.createSurfaceForDbOverlay(element, overlay);
}).then(function (result) {
marker2 = result;
diff --git a/frontend-js/src/test/js/map/overlay/AbstractDbOverlay-test.js b/frontend-js/src/test/js/map/overlay/AbstractDbOverlay-test.js
index 3c34a8320bdc2d552aabe87ee7e40c47ae98b056..a5f1240c5dd7497c31dd8e20665559804bbf0714 100644
--- a/frontend-js/src/test/js/map/overlay/AbstractDbOverlay-test.js
+++ b/frontend-js/src/test/js/map/overlay/AbstractDbOverlay-test.js
@@ -10,10 +10,6 @@ var logger = require('../../logger');
describe('AbstractDbOverlay', function () {
var mapMock = {
registerDbOverlay: function () {
- },
- refreshInfoWindows: function () {
- },
- updateInfoWindowForIdentifiedElement: function () {
}
};
describe("constructor", function () {
diff --git a/frontend-js/src/test/js/map/overlay/DrugDbOverlay-test.js b/frontend-js/src/test/js/map/overlay/DrugDbOverlay-test.js
index 0c0666f87f8906fd578ba5d89bcf9ce72e52bfc8..04d73c7b26f9d60aa9c3fa258e521933f6ab4de6 100644
--- a/frontend-js/src/test/js/map/overlay/DrugDbOverlay-test.js
+++ b/frontend-js/src/test/js/map/overlay/DrugDbOverlay-test.js
@@ -5,9 +5,11 @@ require("../../mocha-config");
var IdentifiedElement = require('../../../../main/js/map/data/IdentifiedElement');
var DrugDbOverlay = require('../../../../main/js/map/overlay/DrugDbOverlay');
+var Point = require('../../../../main/js/map/canvas/Point');
var ServerConnector = require('../../ServerConnector-mock');
-var assert = require('assert');
+var chai = require('chai');
+var assert = chai.assert;
describe('DrugDbOverlay', function () {
it("constructor 1", function () {
@@ -22,23 +24,60 @@ describe('DrugDbOverlay', function () {
assert.equal(logger.getWarnings.length, 0);
});
- it("searchByQuery", function () {
- helper.setUrl("http://test/?id=drug_target_sample");
-
- var map, searchDb;
- return ServerConnector.getProject("drug_target_sample").then(function (project) {
- map = helper.createCustomMap(project);
- searchDb = helper.createDrugDbOverlay(map);
- return searchDb.searchByQuery("NADH");
- }).then(function (drugs) {
- assert.equal(drugs.length, 1);
- assert.equal(searchDb.getQueries().length, 1);
- return searchDb.getElementsByQuery(searchDb.getQueries()[0]);
- }).then(function (elements) {
- assert.ok(elements.length > 1);
- return searchDb.getIdentifiedElements();
- }).then(function (elements) {
- assert.equal(elements.length, 1);
+ describe("searchByQuery", function () {
+ it("simple", function () {
+ helper.setUrl("http://test/?id=drug_target_sample");
+
+ var map, searchDb;
+ return ServerConnector.getProject("drug_target_sample").then(function (project) {
+ map = helper.createCustomMap(project);
+ searchDb = helper.createDrugDbOverlay(map);
+ return searchDb.searchByQuery("NADH");
+ }).then(function (drugs) {
+ assert.equal(drugs.length, 1);
+ assert.equal(searchDb.getQueries().length, 1);
+ return searchDb.getElementsByQuery(searchDb.getQueries()[0]);
+ }).then(function (elements) {
+ assert.ok(elements.length > 1);
+ return searchDb.getIdentifiedElements();
+ }).then(function (elements) {
+ assert.equal(elements.length, 1);
+ });
+ });
+ it("check if info window updated", function () {
+ helper.setUrl("http://test/?id=drug_target_sample");
+
+ var map, searchDb, alias, marker, infoWindow;
+ var ie = new IdentifiedElement({
+ id: 436152,
+ modelId: 20637,
+ type: 'ALIAS'
+ });
+ return ServerConnector.getProject("drug_target_sample").then(function (project) {
+ map = helper.createCustomMap(project);
+ searchDb = helper.createDrugDbOverlay(map);
+
+ return map.getModel().getByIdentifiedElement(ie);
+ }).then(function (result) {
+ alias = result;
+ marker = map.getMapCanvas().createMarker({icon: "empty.png", position: new Point(0, 0)});
+ return map.openInfoWindowForIdentifiedElement(ie, marker)
+ }).then(function (result) {
+ infoWindow = result;
+ assert.notOk(infoWindow.getContent().innerHTML.indexOf("NADH") >= 0);
+
+ return searchDb.searchByQuery("NADH");
+ }).then(function (drugs) {
+ assert.equal(drugs.length, 1);
+ assert.equal(searchDb.getQueries().length, 1);
+ return searchDb.getElementsByQuery(searchDb.getQueries()[0]);
+ }).then(function (elements) {
+ assert.ok(elements.length > 1);
+ return searchDb.getIdentifiedElements();
+ }).then(function (elements) {
+ assert.ok(infoWindow.getContent().innerHTML.indexOf("NADH") >= 0);
+ assert.equal(elements.length, 1);
+ });
});
});
diff --git a/frontend-js/src/test/js/map/overlay/SearchDbOverlay-test.js b/frontend-js/src/test/js/map/overlay/SearchDbOverlay-test.js
index 5e9a3e006b604bcba07b9c50e9cf7bcc72fecd4a..f88dfeda4cdd0a634c2d59dab25d5956d588e91e 100644
--- a/frontend-js/src/test/js/map/overlay/SearchDbOverlay-test.js
+++ b/frontend-js/src/test/js/map/overlay/SearchDbOverlay-test.js
@@ -6,6 +6,7 @@ require("../../mocha-config");
var IdentifiedElement = require('../../../../main/js/map/data/IdentifiedElement');
var SearchDbOverlay = require('../../../../main/js/map/overlay/SearchDbOverlay');
var AbstractDbOverlay = require('../../../../main/js/map/overlay/AbstractDbOverlay');
+var Point = require('../../../../main/js/map/canvas/Point');
var ServerConnector = require('../../ServerConnector-mock');
var assert = require('assert');
@@ -31,7 +32,7 @@ describe('SearchDbOverlay', function () {
var searchParams = {
modelId: map.getModel().getId(),
- coordinates: new google.maps.Point(207.73, 479.18),
+ coordinates: new Point(207.73, 479.18),
zoom: 4
};
return searchDb.searchByCoordinates(searchParams);
@@ -71,7 +72,7 @@ describe('SearchDbOverlay', function () {
});
});
it("on submap", function () {
- helper.setUrl("http://localhost/?id=complex_model_with_submaps")
+ helper.setUrl("http://localhost/?id=complex_model_with_submaps");
return ServerConnector.getProject().then(function (project) {
var map = helper.createCustomMap(project);
var searchDb = helper.createSearchDbOverlay(map);
@@ -89,7 +90,7 @@ describe('SearchDbOverlay', function () {
return ServerConnector.getProject().then(function (project) {
var map = helper.createCustomMap(project);
var searchDb = helper.createSearchDbOverlay(map);
- var point = new google.maps.Point(316.05, 253.61);
+ var point = new Point(316.05, 253.61);
var queryType = AbstractDbOverlay.QueryType.SEARCH_BY_COORDINATES;
var query = searchDb.encodeQuery(queryType, map.getModel().getId(), point, 2);
return searchDb.searchByEncodedQuery(query);
@@ -125,7 +126,7 @@ describe('SearchDbOverlay', function () {
var searchParams = {
modelId: map.getModel().getId(),
- coordinates: new google.maps.Point(553.10, 479.18),
+ coordinates: new Point(553.10, 479.18),
zoom: 4
};
return searchDb.searchByCoordinates(searchParams);
@@ -143,7 +144,7 @@ describe('SearchDbOverlay', function () {
var searchParams = {
modelId: map.getModel().getId(),
- coordinates: new google.maps.Point(553.10, 479.18),
+ coordinates: new Point(553.10, 479.18),
zoom: 4
};
return searchDb.searchByCoordinates(searchParams);
@@ -160,7 +161,7 @@ describe('SearchDbOverlay', function () {
var searchParams = {
modelId: map.getModel().getId(),
- coordinates: new google.maps.Point(316.05, 253.61),
+ coordinates: new Point(316.05, 253.61),
zoom: 2
};
return searchDb.searchByCoordinates(searchParams);
@@ -178,7 +179,7 @@ describe('SearchDbOverlay', function () {
var searchParams = {
modelId: map.getModel().getId(),
- coordinates: new google.maps.Point(316.05, 253.61),
+ coordinates: new Point(316.05, 253.61),
zoom: 10
};
return searchDb.searchByCoordinates(searchParams);
@@ -222,4 +223,23 @@ describe('SearchDbOverlay', function () {
});
});
+ it("searchByTarget", function () {
+ var target = new IdentifiedElement({
+ type: "ALIAS",
+ id: 329170,
+ modelId: 15781
+ });
+
+ var map;
+ return ServerConnector.getProject().then(function (project) {
+ map = helper.createCustomMap(project);
+ var searchDb = helper.createSearchDbOverlay(map);
+
+ return searchDb.searchByTarget(target);
+ }).then(function (result) {
+ assert.ok(map.getModel().isAvailable(target));
+ });
+ });
+
+
});
diff --git a/frontend-js/src/test/js/map/surface/AliasSurface-test.js b/frontend-js/src/test/js/map/surface/AliasSurface-test.js
index 9f55e766c7fa8485d92570dd104940512d488423..5658cfd95042e91916aed4e6863c48e7a78b9d08 100644
--- a/frontend-js/src/test/js/map/surface/AliasSurface-test.js
+++ b/frontend-js/src/test/js/map/surface/AliasSurface-test.js
@@ -4,98 +4,93 @@ require("../../mocha-config");
var logger = require('../../logger');
var AliasSurface = require('../../../../main/js/map/surface/AliasSurface');
-var IdentifiedElement = require('../../../../main/js/map/data/IdentifiedElement');
var ServerConnector = require('../../ServerConnector-mock');
var assert = require('assert');
-describe('AliasSurface', function() {
- it("constructor", function() {
+describe('AliasSurface', function () {
+ it("init", function () {
var map = helper.createCustomMap();
var alias = helper.createAlias(map);
var layoutAlias = helper.createLayoutAlias(alias);
- return AliasSurface.create({
- overlayAlias : layoutAlias,
- alias : alias,
- map : map,
- startX : 1,
- endX : 2
- }).then(function(result) {
- assert.ok(result instanceof AliasSurface);
+ var result = new AliasSurface({
+ overlayAlias: layoutAlias,
+ alias: alias,
+ map: map,
+ startX: 1,
+ endX: 2
+ });
+ return result.init().then(function () {
assert.equal(logger.getWarnings.length, 0);
assert.ok(result.getIdentifiedElement());
});
});
- it("createFromIdentifiedElement", function() {
- var map;
- var alias;
- return ServerConnector.getProject().then(function(project) {
- map = helper.createCustomMap(project);
- return map.getModel().getAliasById(329171);
- }).then(function(result) {
- alias = result;
- var identifiedElement = new IdentifiedElement(alias);
-
- return AliasSurface.createFromIdentifiedElement({
- element : identifiedElement,
- map : map
+ describe("setBoundsForAlias", function () {
+ it("from simple element", function () {
+ var map;
+ var alias, surface;
+ return ServerConnector.getProject().then(function (project) {
+ map = helper.createCustomMap(project);
+ return map.getModel().getAliasById(329171);
+ }).then(function (result) {
+ alias = result;
+ surface = new AliasSurface({
+ alias: result,
+ map: map
+ });
+ return surface.init();
+ }).then(function () {
+ var bounds = surface.getBounds();
+ surface.setBoundsForAlias(1, 3);
+ var bounds2 = surface.getBounds();
+ assert.equal(bounds.getRightBottom().y, bounds2.getRightBottom().y);
+ assert.ok(bounds.getRightBottom().x !== bounds2.getRightBottom().x);
});
- }).then(function(result) {
- assert.ok(result instanceof AliasSurface);
- assert.equal(logger.getWarnings.length, 0);
- assert.ok(result.getIdentifiedElement());
});
- });
- it("setBoundsForAlias", function() {
- var map;
- var alias;
- return ServerConnector.getProject().then(function(project) {
- map = helper.createCustomMap(project);
- return map.getModel().getAliasById(329171);
- }).then(function(result) {
- alias = result;
- var identifiedElement = new IdentifiedElement(alias);
- return AliasSurface.createFromIdentifiedElement({
- element : identifiedElement,
- map : map
+ it("from element with data overlay", function () {
+ var map = helper.createCustomMap();
+ var alias = helper.createAlias(map);
+ var surface = new AliasSurface({
+ overlayAlias: helper.createLayoutAlias(alias),
+ alias: alias,
+ map: map,
+ startX: 1,
+ endX: 2
+ });
+ return surface.init().then(function () {
+ return surface.setBoundsForAlias(0, 1);
+ }).then(function () {
+ assert.ok(surface.getBounds());
});
- }).then(function(result) {
- var bounds = result.getBounds();
- result.setBoundsForAlias(1, 3);
- var bounds2 = result.getBounds();
- assert.equal(bounds.getSouthWest().lat(), bounds2.getSouthWest().lat());
- assert.ok(bounds.getSouthWest().lng() !== bounds2.getSouthWest().lng());
});
});
- describe('click', function() {
- it("default", function() {
+ describe('click', function () {
+ it("default", function () {
var map;
- var alias;
+ var alias, surface;
var clicked = false;
- return ServerConnector.getProject().then(function(project) {
+ return ServerConnector.getProject().then(function (project) {
map = helper.createCustomMap(project);
return map.getModel().getAliasById(329171);
- }).then(function(result) {
+ }).then(function (result) {
alias = result;
- var identifiedElement = new IdentifiedElement(alias);
- return AliasSurface.createFromIdentifiedElement({
- element : identifiedElement,
- map : map,
- onClick : function() {
+ surface = new AliasSurface({
+ alias: result,
+ map: map,
+ onClick: function () {
clicked = true;
}
});
- }).then(function(result) {
- return result.onClickHandler();
- }).then(function() {
+ return surface.init();
+ }).then(function () {
+ return surface.onClickHandler();
+ }).then(function () {
assert.ok(clicked);
});
});
-
});
-
});
diff --git a/frontend-js/src/test/js/map/surface/ReactionSurface-test.js b/frontend-js/src/test/js/map/surface/ReactionSurface-test.js
index babf8bf7fdc4c2097910502dab9fd1e232947ba2..cbe48656eb8fe90534d71937949e4f634dd412df 100644
--- a/frontend-js/src/test/js/map/surface/ReactionSurface-test.js
+++ b/frontend-js/src/test/js/map/surface/ReactionSurface-test.js
@@ -2,6 +2,7 @@
require("../../mocha-config");
var ReactionSurface = require('../../../../main/js/map/surface/ReactionSurface');
+// noinspection JSUnusedLocalSymbols
var ServerConnector = require('../../ServerConnector-mock');
var assert = require('assert');
@@ -9,45 +10,49 @@ var assert = require('assert');
var logger = require('../../logger');
describe('ReactionSurface', function () {
- it("Constructor", function () {
- var map = helper.createAbstractCustomMap();
- var reaction = helper.createReaction(map);
+ describe("init", function () {
+ it("default", function () {
+ var map = helper.createAbstractCustomMap();
+ var reaction = helper.createReaction(map);
+
+ var reactionOverlay = new ReactionSurface({
+ reaction: reaction,
+ map: map,
+ customized: false
+ });
+ return reactionOverlay.init().then(function () {
+ assert.ok(reactionOverlay.getMapCanvasObjects().length > 0);
+ assert.ok(reactionOverlay.getColor());
+ assert.ok(reactionOverlay.getWidth());
+ assert.ok(reactionOverlay.getBounds());
+ assert.ok(reactionOverlay.getBioEntity());
+ assert.ok(reactionOverlay.getCustomMap());
+ assert.ok(reactionOverlay.getId());
+ assert.ok(typeof reactionOverlay.getColor() === "string");
+ });
- var reactionOverlay = new ReactionSurface({
- reaction: reaction,
- map: map,
- customized: false
});
-
- assert.ok(reactionOverlay.getGoogleMapObjects().length > 0);
- assert.ok(reactionOverlay.getColor());
- assert.ok(reactionOverlay.getWidth());
- assert.ok(reactionOverlay.getBounds());
- assert.ok(reactionOverlay.getBioEntity());
- assert.ok(reactionOverlay.getCustomMap());
- assert.ok(reactionOverlay.getId());
- assert.ok(typeof reactionOverlay.getColor() === "string");
- });
- it("create", function () {
- var map = helper.createAbstractCustomMap();
- var reaction = helper.createReaction(map);
- var layoutReaction = helper.createLayoutReaction(reaction);
-
- return ReactionSurface.create({
- layoutReaction: layoutReaction,
- reaction: reaction,
- map: map,
- customized: false
- }).then(function(reactionOverlay){
-
- assert.ok(reactionOverlay.getGoogleMapObjects().length > 0);
- assert.ok(reactionOverlay.getColor());
- assert.ok(reactionOverlay.getWidth());
- assert.ok(reactionOverlay.getBounds());
- assert.ok(reactionOverlay.getBioEntity());
- assert.ok(reactionOverlay.getCustomMap());
- assert.ok(reactionOverlay.getId());
- assert.ok(typeof reactionOverlay.getColor() === "string");
+ it("with data overlay", function () {
+ var map = helper.createAbstractCustomMap();
+ var reaction = helper.createReaction(map);
+ var layoutReaction = helper.createLayoutReaction(reaction);
+
+ var reactionOverlay = new ReactionSurface({
+ layoutReaction: layoutReaction,
+ reaction: reaction,
+ map: map,
+ customized: false
+ });
+ return reactionOverlay.init().then(function () {
+ assert.ok(reactionOverlay.getMapCanvasObjects().length > 0);
+ assert.ok(reactionOverlay.getColor());
+ assert.ok(reactionOverlay.getWidth());
+ assert.ok(reactionOverlay.getBounds());
+ assert.ok(reactionOverlay.getBioEntity());
+ assert.ok(reactionOverlay.getCustomMap());
+ assert.ok(reactionOverlay.getId());
+ assert.ok(typeof reactionOverlay.getColor() === "string");
+ });
});
});
@@ -62,22 +67,29 @@ describe('ReactionSurface', function () {
map: map,
customized: false
});
-
- reactionOverlay.hide();
- assert.equal(reactionOverlay.isShown(), false);
-
- reactionOverlay.show();
- assert.ok(reactionOverlay.isShown());
-
- assert.equal(logger.getWarnings().length, 0);
-
- reactionOverlay.show();
- assert.ok(reactionOverlay.isShown());
- assert.equal(logger.getWarnings().length, 1);
+ return reactionOverlay.init().then(function () {
+ return reactionOverlay.show();
+ }).then(function () {
+ assert.equal(reactionOverlay.isShown(), true);
+ return reactionOverlay.hide();
+ }).then(function () {
+ assert.equal(reactionOverlay.isShown(), false);
+
+ return reactionOverlay.show();
+ }).then(function () {
+ assert.ok(reactionOverlay.isShown());
+
+ assert.equal(logger.getWarnings().length, 0);
+
+ return reactionOverlay.show();
+ }).then(function () {
+ assert.ok(reactionOverlay.isShown());
+ assert.equal(logger.getWarnings().length, 1);
+ });
});
- it("changedToCustomized", function() {
+ it("changedToCustomized", function () {
var map = helper.createCustomMap();
var reaction = helper.createReaction(map);
var layoutReaction = helper.createLayoutReaction(reaction);
@@ -94,7 +106,7 @@ describe('ReactionSurface', function () {
});
- it("createLine", function() {
+ it("createLine", function () {
var map = helper.createAbstractCustomMap();
var line = ReactionSurface.createLine({
@@ -105,7 +117,7 @@ describe('ReactionSurface', function () {
end: {
x: 100,
y: 100
- },
+ }
}, "#000000", 3, map);
assert.ok(line);
diff --git a/frontend-js/src/test/js/map/window/AliasInfoWindow-test.js b/frontend-js/src/test/js/map/window/AliasInfoWindow-test.js
index 845f2bb295ce228d34b28cf3f3111074f7891c20..ab23b3e855eef90f8a7455d0b3485b5670fbcfe1 100644
--- a/frontend-js/src/test/js/map/window/AliasInfoWindow-test.js
+++ b/frontend-js/src/test/js/map/window/AliasInfoWindow-test.js
@@ -21,15 +21,13 @@ describe('AliasInfoWindow', function () {
it("default", function () {
var map = helper.createCustomMap();
- var alias = helper.createAlias();
- alias.setId(30001);
+ var alias = helper.createAlias(map);
alias.setIsComplete(false);
- alias.setModelId(map.getId());
- map.getModel().addAlias(alias);
var aliasWindow = new AliasInfoWindow({
alias: alias,
- map: map
+ map: map,
+ marker: helper.createMarker({element: alias, map: map})
});
assert.equal(alias, aliasWindow.getAlias());
@@ -58,7 +56,8 @@ describe('AliasInfoWindow', function () {
var aliasWindow = new AliasInfoWindow({
alias: alias,
- map: map
+ map: map,
+ marker: helper.createMarker({element: alias, map: map})
});
assert.equal(alias, aliasWindow.alias);
@@ -75,7 +74,8 @@ describe('AliasInfoWindow', function () {
var alias = helper.createAlias(map);
var aliasWindow = new AliasInfoWindow({
alias: alias,
- map: map
+ map: map,
+ marker: helper.createMarker({element: alias, map: map})
});
oc.searchNamesByTarget = function () {
@@ -116,7 +116,8 @@ describe('AliasInfoWindow', function () {
}).then(function (alias) {
aliasWindow = new AliasInfoWindow({
alias: alias,
- map: map
+ map: map,
+ marker: helper.createMarker({element: alias, map: map})
});
return aliasWindow.init()
}).then(function () {
@@ -145,7 +146,8 @@ describe('AliasInfoWindow', function () {
}).then(function (alias) {
aliasWindow = new AliasInfoWindow({
alias: alias,
- map: map
+ map: map,
+ marker: helper.createMarker({element: alias, map: map})
});
return oc.getDetailDataByIdentifiedElement(ie, true);
}).then(function (data) {
@@ -168,7 +170,8 @@ describe('AliasInfoWindow', function () {
var aliasWindow = new AliasInfoWindow({
alias: alias,
- map: map
+ map: map,
+ marker: helper.createMarker({element: alias, map: map})
});
return oc.getDetailDataByIdentifiedElement(new IdentifiedElement(alias), true).then(function (data) {
@@ -197,7 +200,8 @@ describe('AliasInfoWindow', function () {
var aliasWindow = new AliasInfoWindow({
alias: alias,
- map: map
+ map: map,
+ marker: helper.createMarker({element: alias, map: map})
});
return oc.getDetailDataByIdentifiedElement(new IdentifiedElement(alias), true).then(function (data) {
@@ -234,7 +238,8 @@ describe('AliasInfoWindow', function () {
}).then(function (alias) {
win = new AliasInfoWindow({
alias: alias,
- map: map
+ map: map,
+ marker: helper.createMarker({element: alias, map: map})
});
return win.init();
}).then(function () {
@@ -264,7 +269,8 @@ describe('AliasInfoWindow', function () {
}).then(function (alias) {
win = new AliasInfoWindow({
alias: alias,
- map: map
+ map: map,
+ marker: helper.createMarker({element: alias, map: map})
});
return win.init();
}).then(function () {
@@ -301,7 +307,8 @@ describe('AliasInfoWindow', function () {
}).then(function (alias) {
win = new AliasInfoWindow({
alias: alias,
- map: map
+ map: map,
+ marker: helper.createMarker({element: alias, map: map})
});
return win.init();
}).then(function () {
@@ -322,7 +329,8 @@ describe('AliasInfoWindow', function () {
var aliasWindow = new AliasInfoWindow({
alias: alias,
- map: map
+ map: map,
+ marker: helper.createMarker({element: alias, map: map})
});
assert.ok(functions.isDomElement(aliasWindow.createWaitingContentDiv()));
@@ -342,7 +350,8 @@ describe('AliasInfoWindow', function () {
}).then(function (alias) {
aliasWindow = new AliasInfoWindow({
alias: alias,
- map: map
+ map: map,
+ marker: helper.createMarker({element: alias, map: map})
});
aliasWindow.layoutAliases = [helper.createLayoutAlias(alias), null];
aliasWindow.layoutNames = ["x", "y"];
diff --git a/frontend-js/src/test/js/map/window/PointInfoWindow-test.js b/frontend-js/src/test/js/map/window/PointInfoWindow-test.js
new file mode 100644
index 0000000000000000000000000000000000000000..f8184c0f7d1079e813552aeaed497443432023aa
--- /dev/null
+++ b/frontend-js/src/test/js/map/window/PointInfoWindow-test.js
@@ -0,0 +1,26 @@
+"use strict";
+require("../../mocha-config");
+var ServerConnector = require('../../ServerConnector-mock');
+
+var Promise = require("bluebird");
+
+var Point = require('../../../../main/js/map/canvas/Point');
+var PointData = require('../../../../main/js/map/data/PointData');
+var PointInfoWindow = require('../../../../main/js/map/window/PointInfoWindow');
+
+var assert = require('assert');
+
+var logger = require('../../logger');
+
+describe('PointInfoWindow', function () {
+ it('getPosition', function () {
+ var map = helper.createCustomMap();
+
+ var infoWindow = new PointInfoWindow({
+ point: new PointData(new Point(1, 2), 3),
+ map: map
+ });
+ assert.ok(infoWindow.getPosition());
+ });
+
+});
diff --git a/frontend-js/src/test/js/map/window/ReactionInfoWindow-test.js b/frontend-js/src/test/js/map/window/ReactionInfoWindow-test.js
index b8f33d0f26da8d21aec326c412ba49d0c3156620..9f2d84bd2c19c948aaf9a0bf0b5022831847a31f 100644
--- a/frontend-js/src/test/js/map/window/ReactionInfoWindow-test.js
+++ b/frontend-js/src/test/js/map/window/ReactionInfoWindow-test.js
@@ -4,6 +4,7 @@ require("../../mocha-config");
var ServerConnector = require('../../ServerConnector-mock');
var KineticLaw = require('../../../../main/js/map/data/KineticLaw');
+var Point = require('../../../../main/js/map/canvas/Point');
var ReactionInfoWindow = require('../../../../main/js/map/window/ReactionInfoWindow');
var chai = require('chai');
@@ -28,6 +29,26 @@ describe('ReactionInfoWindow', function () {
});
});
+ describe('open', function () {
+ it("default", function () {
+ var reactionWindow;
+
+ var map = helper.createCustomMap();
+
+ var reaction = helper.createReaction(map, true);
+
+ var marker = map.getMapCanvas().createMarker({position: new Point(0, 0), id: "1", icon: "temp.png"});
+ reactionWindow = new ReactionInfoWindow({
+ reaction: reaction,
+ map: map,
+ marker: marker
+ });
+ return reactionWindow.init().then(function () {
+ return reactionWindow.open();
+ })
+ });
+ });
+
describe('createContentDiv', function () {
it("with invalid kinetics", function () {
var map = helper.createCustomMap();
diff --git a/frontend-js/src/test/js/minerva-test.js b/frontend-js/src/test/js/minerva-test.js
index 9e9e54d4997643eac402e851842eee00d6288e6e..48bdb5c1e3d6741f9c7eb0add03f950161db0e7e 100644
--- a/frontend-js/src/test/js/minerva-test.js
+++ b/frontend-js/src/test/js/minerva-test.js
@@ -7,6 +7,7 @@ var Promise = require("bluebird");
var minerva = require('../../main/js/minerva');
var SecurityError = require('../../main/js/SecurityError');
var ServerConnectorMock = require('./ServerConnector-mock');
+var Point= require('../../main/js/map/canvas/Point');
var ProxyAccessPlugin = require('./plugin/ProxyAccessPlugin');
var chai = require('chai');
@@ -50,7 +51,7 @@ describe('minerva global', function () {
helper.setUrl("http://test/?id=complex_model_with_images");
var customMap;
return ServerConnectorMock.getProject().then(function (project) {
- var options = helper.createOptions(project);
+ var options = helper.createCustomMapOptions(project);
return minerva.create(options);
}).then(function (result) {
@@ -106,7 +107,7 @@ describe('minerva global', function () {
return minerva.create(options);
}).then(function (result) {
var center = ServerConnectorMock.getSessionData(options.getProject()).getCenter(options.getProject().getModels()[0]);
- assert.ok(center instanceof google.maps.Point);
+ assert.ok(center instanceof Point);
assert.equal(center.x, 5);
assert.equal(center.y, 6);
return result.destroy();
@@ -240,18 +241,6 @@ describe('minerva global', function () {
});
});
- it("constructor with touch enabled", function () {
- return ServerConnectorMock.getProject().then(function (project) {
- var options = helper.createCustomMapOptions(project);
- options.setCustomTouchInterface(true);
- return minerva.create(options).then(function (result) {
- assert.ok(result);
- return result.destroy();
- });
- });
- });
-
-
it('create Export', function () {
var options = null;
return ServerConnectorMock.getProject().then(function (project) {
diff --git a/frontend-js/src/test/js/mocha-config.js b/frontend-js/src/test/js/mocha-config.js
index 62bec73f43534b833af3847af4303f24a0a16158..c1b8448957c0aa9503d767d7c089570e1bb7e568 100644
--- a/frontend-js/src/test/js/mocha-config.js
+++ b/frontend-js/src/test/js/mocha-config.js
@@ -3,6 +3,7 @@
var Promise = require("bluebird");
var Cookies = require('js-cookie');
+
var Helper = require('./helper');
var GuiConnector = require('./GuiConnector-mock');
@@ -31,6 +32,9 @@ before(function () {
global.MathJax = {
Hub: {
Config: function () {
+ },
+ Queue: function(){
+
}
}
};
@@ -65,15 +69,8 @@ before(function () {
global.MouseEvent = window.MouseEvent;
global.FileReader = window.FileReader;
- var originalCreateElement = document.createElement;
- document.createElement = function (arg) {
- var result = originalCreateElement.call(this, arg);
- // workaround for: https://github.com/tmpvar/jsdom/issues/961
- if ("li" === arg) {
- result.dataset = [];
- }
- return result;
- };
+ global.getComputedStyle = window.getComputedStyle;
+ global.Image = window.Image;
window.open = function () {
var result = {};
@@ -86,6 +83,80 @@ before(function () {
};
+ //CANVAS mocking
+ window.HTMLCanvasElement.prototype.getContext = function () {
+ return {
+ fillRect: function () {
+ },
+ clearRect: function () {
+ },
+ getImageData: function (x, y, w, h) {
+ return {
+ data: new Array(w * h * 4)
+ };
+ },
+ putImageData: function () {
+ },
+ createImageData: function () {
+ return []
+ },
+ setTransform: function () {
+ },
+ drawImage: function () {
+ },
+ save: function () {
+ },
+ fillText: function () {
+ },
+ restore: function () {
+ },
+ beginPath: function () {
+ },
+ moveTo: function () {
+ },
+ lineTo: function () {
+ },
+ closePath: function () {
+ },
+ stroke: function () {
+ },
+ translate: function () {
+ },
+ scale: function () {
+ },
+ rotate: function () {
+ },
+ arc: function () {
+ },
+ fill: function () {
+ },
+ measureText: function () {
+ return {width: 0};
+ },
+ transform: function () {
+ },
+ rect: function () {
+ },
+ clip: function () {
+ },
+ canvas: document.createElement("div")
+ };
+ };
+
+ window.HTMLCanvasElement.prototype.toDataURL = function () {
+ return "";
+ };
+
+ //open layers uses this function
+ global.requestAnimationFrame = function () {
+ };
+ global.CanvasPattern = function(){
+
+ };
+ global.CanvasGradient = function(){
+
+ };
+
// pileup is using heavily some browser defined javascript
var pileup = require('pileup');
pileup.create = function () {
@@ -102,7 +173,7 @@ before(function () {
};
// ---
// MolStar is inproperly packed
- global.MolStar = function(){
+ global.MolStar = function () {
};
// ---
@@ -139,6 +210,7 @@ beforeEach(function () {
ServerConnector.getSessionData(null).setLogin("anonymous");
+ // @type HTMLElement
global.testDiv = document.createElement("div");
global.testDiv.id = "test";
document.body.appendChild(testDiv);
@@ -147,7 +219,7 @@ beforeEach(function () {
global.helper = new Helper(configuration);
helper.setUrl("http://test/");
GuiConnector.init();
- }).catch(function(error){
+ }).catch(function (error) {
logger.error(error);
throw error;
});
diff --git a/frontend-js/src/test/js/plugin/MinervaPluginProxy-test.js b/frontend-js/src/test/js/plugin/MinervaPluginProxy-test.js
index 9ba6e07512622e910ed8d0aa427917a9967fd90a..010051e604d0db1bf76b3c749bbeb57d593512d3 100644
--- a/frontend-js/src/test/js/plugin/MinervaPluginProxy-test.js
+++ b/frontend-js/src/test/js/plugin/MinervaPluginProxy-test.js
@@ -9,12 +9,18 @@ var Alias = require('../../../main/js/map/data/Alias');
var DataOverlay = require('../../../main/js/map/data/DataOverlay');
var MinervaPluginProxy = require('../../../main/js/plugin/MinervaPluginProxy');
var ServerConnector = require('../ServerConnector-mock');
+var Point = require('../../../main/js/map/canvas/Point');
var logger = require('../logger');
var chai = require('chai');
var assert = chai.assert;
+/**
+ *
+ * @param {CustomMap} map
+ * @returns {MinervaPluginProxy}
+ */
function createProxy(map) {
// noinspection SpellCheckingInspection
return new MinervaPluginProxy({
@@ -69,7 +75,7 @@ describe('MinervaPluginProxy', function () {
assert.ok(callbackOk);
callbackOk = false;
var params = {
- coordinates: new google.maps.Point(184.79, 365.76),
+ coordinates: new Point(184.79, 365.76),
zoom: 2,
modelId: map.getProject().getModels()[0].getId()
};
@@ -306,7 +312,7 @@ describe('MinervaPluginProxy', function () {
}).then(function () {
var sessionData = ServerConnector.getSessionData(map.getProject());
var center = sessionData.getCenter(map.getProject().getModels()[0]);
- assert.ok(center instanceof google.maps.Point);
+ assert.ok(center instanceof Point);
assert.closeTo(parseFloat(center.x), 10, helper.EPSILON);
assert.closeTo(parseFloat(center.y), 20, helper.EPSILON);
}).then(function () {
@@ -326,7 +332,7 @@ describe('MinervaPluginProxy', function () {
});
}).then(function () {
var center = proxy.project.map.getCenter({modelId: 15781});
- assert.ok(center instanceof google.maps.Point);
+ assert.ok(center instanceof Point);
assert.closeTo(parseFloat(center.x), 10, helper.EPSILON);
assert.closeTo(parseFloat(center.y), 20, helper.EPSILON);
}).then(function () {
@@ -341,12 +347,12 @@ describe('MinervaPluginProxy', function () {
proxy = createProxy(map);
return proxy.project.map.setZoom({
modelId: 15781,
- zoom: 10
+ zoom: 4
});
}).then(function () {
var sessionData = ServerConnector.getSessionData(map.getProject());
var zoom = sessionData.getZoomLevel(map.getProject().getModels()[0]);
- assert.equal(zoom, 10);
+ assert.equal(zoom, 4);
}).then(function () {
map.destroy();
});
@@ -359,11 +365,11 @@ describe('MinervaPluginProxy', function () {
proxy = createProxy(map);
return proxy.project.map.setZoom({
modelId: 15781,
- zoom: 10
+ zoom: 4
});
}).then(function () {
var zoom = proxy.project.map.getZoom({modelId: 15781});
- assert.equal(zoom, 10);
+ assert.equal(zoom, 4);
}).then(function () {
map.destroy();
});
@@ -416,20 +422,23 @@ describe('MinervaPluginProxy', function () {
});
it("fitBounds", function () {
- var map, proxy;
+ var map, proxy, center;
return ServerConnector.getProject().then(function (project) {
map = helper.createCustomMap(project);
proxy = createProxy(map);
- var center = map.getGoogleMap().getCenter();
- proxy.project.map.fitBounds({
- id: 329177,
+ center = map.getCenter();
+ return proxy.project.map.fitBounds({
modelId: 15781,
- type: "ALIAS"
+ x1:10,
+ x2:10,
+ y1:20,
+ y2:30
});
- var center2 = map.getGoogleMap().getCenter();
- assert.ok(center.lat() !== center2.lat() || center.lng() !== center2.lng());
}).then(function () {
- map.destroy();
+ var center2 = map.getCenter();
+ assert.ok(center.x !== center2.x || center.y !== center2.y);
+ }).then(function () {
+ return map.destroy();
});
});
@@ -614,7 +623,7 @@ describe('MinervaPluginProxy', function () {
callback: function (data) {
assert.equal(map.getId(), data.modelId);
var center = data.center;
- assert.ok(center instanceof google.maps.Point);
+ assert.ok(center instanceof Point);
assert.closeTo(parseFloat(center.x), 10, helper.EPSILON);
assert.closeTo(parseFloat(center.y), 20, helper.EPSILON);
callbackOk = true;
diff --git a/frontend-js/testFiles/apiCalls/configuration/token=MOCK_TOKEN_ID& b/frontend-js/testFiles/apiCalls/configuration/token=MOCK_TOKEN_ID&
index 688d910149b68d3b6b8dd8827b4ffd48653720ab..970d722993acee79644ccddb7b7cca9952a5c3b5 100644
--- a/frontend-js/testFiles/apiCalls/configuration/token=MOCK_TOKEN_ID&
+++ b/frontend-js/testFiles/apiCalls/configuration/token=MOCK_TOKEN_ID&
@@ -1 +1 @@
-{"annotators":[{"className":"lcsb.mapviewer.annotation.services.annotators.BrendaAnnotator","description":"","elementClassNames":["lcsb.mapviewer.model.map.species.Protein","lcsb.mapviewer.model.map.species.Gene","lcsb.mapviewer.model.map.species.Rna"],"name":"BRENDA","parametersDefinitions":[],"url":"http://www.brenda-enzymes.org"},{"className":"lcsb.mapviewer.annotation.services.annotators.BiocompendiumAnnotator","description":"","elementClassNames":["lcsb.mapviewer.model.map.species.Protein","lcsb.mapviewer.model.map.species.Gene","lcsb.mapviewer.model.map.species.Rna"],"name":"Biocompendium","parametersDefinitions":[],"url":"http://biocompendium.embl.de/"},{"className":"lcsb.mapviewer.annotation.services.annotators.CazyAnnotator","description":"","elementClassNames":["lcsb.mapviewer.model.map.species.Protein","lcsb.mapviewer.model.map.species.Gene","lcsb.mapviewer.model.map.species.Rna"],"name":"CAZy","parametersDefinitions":[],"url":"http://commonchemistry.org"},{"className":"lcsb.mapviewer.annotation.services.annotators.ChebiAnnotator","description":"","elementClassNames":["lcsb.mapviewer.model.map.species.Chemical"],"name":"Chebi","parametersDefinitions":[],"url":"http://www.ebi.ac.uk/chebi/"},{"className":"lcsb.mapviewer.annotation.services.annotators.UniprotAnnotator","description":"","elementClassNames":["lcsb.mapviewer.model.map.species.Protein","lcsb.mapviewer.model.map.species.Gene","lcsb.mapviewer.model.map.species.Rna"],"name":"Uniprot","parametersDefinitions":[],"url":"http://www.uniprot.org/"},{"className":"lcsb.mapviewer.annotation.services.annotators.GoAnnotator","description":"","elementClassNames":["lcsb.mapviewer.model.map.species.Phenotype","lcsb.mapviewer.model.map.compartment.Compartment","lcsb.mapviewer.model.map.species.Complex"],"name":"Gene Ontology","parametersDefinitions":[],"url":"http://amigo.geneontology.org/amigo"},{"className":"lcsb.mapviewer.annotation.services.annotators.HgncAnnotator","description":"","elementClassNames":["lcsb.mapviewer.model.map.species.Protein","lcsb.mapviewer.model.map.species.Rna","lcsb.mapviewer.model.map.species.Gene"],"name":"HGNC","parametersDefinitions":[],"url":"http://www.genenames.org"},{"className":"lcsb.mapviewer.annotation.services.annotators.KeggAnnotator","description":"Annotations extracted from KEGG ENZYME Database based on species EC numbers. Annotation include relevant publications and homologous genes for given EC numbers.","elementClassNames":["lcsb.mapviewer.model.map.species.Protein","lcsb.mapviewer.model.map.species.Gene","lcsb.mapviewer.model.map.species.Rna"],"name":"KEGG","parametersDefinitions":[{"name":"KEGG organism identifier","description":"Space-delimited list of organisms codes for which homologous genes (GENE section in the KEGG enzyme record) should be imported. Currently only ATH (Arabidopsis Thaliana) is supported.","type":"java.lang.String"}],"url":"http://www.genome.jp/kegg/"},{"className":"lcsb.mapviewer.annotation.services.annotators.PdbAnnotator","description":"","elementClassNames":["lcsb.mapviewer.model.map.species.Protein","lcsb.mapviewer.model.map.species.Rna","lcsb.mapviewer.model.map.species.Gene"],"name":"Protein Data Bank","parametersDefinitions":[],"url":"http://www.pdbe.org/"},{"className":"lcsb.mapviewer.annotation.services.annotators.ReconAnnotator","description":"","elementClassNames":["lcsb.mapviewer.model.map.species.Chemical","lcsb.mapviewer.model.map.reaction.Reaction"],"name":"Recon annotator","parametersDefinitions":[],"url":"http://humanmetabolism.org/"},{"className":"lcsb.mapviewer.annotation.services.annotators.EntrezAnnotator","description":"","elementClassNames":["lcsb.mapviewer.model.map.species.Protein","lcsb.mapviewer.model.map.species.Rna","lcsb.mapviewer.model.map.species.Gene"],"name":"Entrez Gene","parametersDefinitions":[],"url":"http://www.ncbi.nlm.nih.gov/gene"},{"className":"lcsb.mapviewer.annotation.services.annotators.EnsemblAnnotator","description":"","elementClassNames":["lcsb.mapviewer.model.map.species.Protein","lcsb.mapviewer.model.map.species.Rna","lcsb.mapviewer.model.map.species.Gene"],"name":"Ensembl","parametersDefinitions":[],"url":"www.ensembl.org"},{"className":"lcsb.mapviewer.annotation.services.annotators.StitchAnnotator","description":"","elementClassNames":["lcsb.mapviewer.model.map.species.SimpleMolecule"],"name":"STITCH","parametersDefinitions":[],"url":"http://stitch.embl.de/"},{"className":"lcsb.mapviewer.annotation.services.annotators.StringAnnotator","description":"","elementClassNames":["lcsb.mapviewer.model.map.species.Protein","lcsb.mapviewer.model.map.species.Gene","lcsb.mapviewer.model.map.species.Rna"],"name":"STRING","parametersDefinitions":[],"url":"http://string-db.org/"},{"className":"lcsb.mapviewer.annotation.services.annotators.TairAnnotator","description":"","elementClassNames":["lcsb.mapviewer.model.map.species.Protein","lcsb.mapviewer.model.map.species.Gene","lcsb.mapviewer.model.map.species.Rna"],"name":"TAIR","parametersDefinitions":[],"url":"http://arabidopsis.org/index.jsp"}],"buildDate":"12/04/2018 12:59","elementTypes":[{"className":"lcsb.mapviewer.model.map.species.Degraded","name":"Degraded","parentClass":"lcsb.mapviewer.model.map.species.Species"},{"className":"lcsb.mapviewer.model.map.compartment.LeftSquareCompartment","name":"Compartment","parentClass":"lcsb.mapviewer.model.map.compartment.Compartment"},{"className":"lcsb.mapviewer.model.map.species.IonChannelProtein","name":"Protein","parentClass":"lcsb.mapviewer.model.map.species.Protein"},{"className":"lcsb.mapviewer.model.map.compartment.TopSquareCompartment","name":"Compartment","parentClass":"lcsb.mapviewer.model.map.compartment.Compartment"},{"className":"lcsb.mapviewer.model.map.species.Ion","name":"Ion","parentClass":"lcsb.mapviewer.model.map.species.Chemical"},{"className":"lcsb.mapviewer.model.map.species.Species","name":"Species","parentClass":"lcsb.mapviewer.model.map.species.Element"},{"className":"lcsb.mapviewer.model.map.compartment.RightSquareCompartment","name":"Compartment","parentClass":"lcsb.mapviewer.model.map.compartment.Compartment"},{"className":"lcsb.mapviewer.model.map.species.Drug","name":"Drug","parentClass":"lcsb.mapviewer.model.map.species.Species"},{"className":"lcsb.mapviewer.model.map.species.Protein","name":"Protein","parentClass":"lcsb.mapviewer.model.map.species.Species"},{"className":"lcsb.mapviewer.model.map.species.TruncatedProtein","name":"Protein","parentClass":"lcsb.mapviewer.model.map.species.Protein"},{"className":"lcsb.mapviewer.model.map.compartment.PathwayCompartment","name":"Compartment","parentClass":"lcsb.mapviewer.model.map.compartment.Compartment"},{"className":"lcsb.mapviewer.model.map.compartment.BottomSquareCompartment","name":"Compartment","parentClass":"lcsb.mapviewer.model.map.compartment.Compartment"},{"className":"lcsb.mapviewer.model.map.species.Rna","name":"RNA","parentClass":"lcsb.mapviewer.model.map.species.Species"},{"className":"lcsb.mapviewer.model.map.species.Chemical","name":"Chemical","parentClass":"lcsb.mapviewer.model.map.species.Species"},{"className":"lcsb.mapviewer.model.map.compartment.Compartment","name":"Compartment","parentClass":"lcsb.mapviewer.model.map.species.Element"},{"className":"lcsb.mapviewer.model.map.compartment.OvalCompartment","name":"Compartment","parentClass":"lcsb.mapviewer.model.map.compartment.Compartment"},{"className":"lcsb.mapviewer.model.map.compartment.SquareCompartment","name":"Compartment","parentClass":"lcsb.mapviewer.model.map.compartment.Compartment"},{"className":"lcsb.mapviewer.model.map.species.Unknown","name":"Unknown","parentClass":"lcsb.mapviewer.model.map.species.Species"},{"className":"lcsb.mapviewer.model.map.species.Element","name":"Element","parentClass":"lcsb.mapviewer.model.map.BioEntity"},{"className":"lcsb.mapviewer.model.map.species.Phenotype","name":"Phenotype","parentClass":"lcsb.mapviewer.model.map.species.Species"},{"className":"lcsb.mapviewer.model.map.species.Complex","name":"Complex","parentClass":"lcsb.mapviewer.model.map.species.Species"},{"className":"lcsb.mapviewer.model.map.species.AntisenseRna","name":"Antisense 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image"}],"mapTypes":[{"id":"DOWNSTREAM_TARGETS","name":"Downstream targets"},{"id":"PATHWAY","name":"Pathway"},{"id":"UNKNOWN","name":"Unknown"}],"miriamTypes":{"BRENDA":{"commonName":"BRENDA","homepage":"http://www.brenda-enzymes.org","registryIdentifier":"MIR:00100101","uris":["urn:miriam:brenda"]},"BiGG_COMPARTMENT":{"commonName":"BiGG Compartment","homepage":"http://bigg.ucsd.edu/compartments/","registryIdentifier":"MIR:00000555","uris":["urn:miriam:bigg.compartment"]},"BiGG_METABOLITE":{"commonName":"BiGG Metabolite","homepage":"http://bigg.ucsd.edu/universal/metabolites","registryIdentifier":"MIR:00000556","uris":["urn:miriam:bigg.metabolite"]},"BiGG_REACTIONS":{"commonName":"BiGG Reaction","homepage":"http://bigg.ucsd.edu/universal/reactions","registryIdentifier":"MIR:00000557","uris":["urn:miriam:bigg.reaction"]},"CAS":{"commonName":"Chemical Abstracts 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diff --git a/frontend-js/testFiles/apiCalls/projects/complex_model_with_images/token=MOCK_TOKEN_ID& b/frontend-js/testFiles/apiCalls/projects/complex_model_with_images/token=MOCK_TOKEN_ID&
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diff --git a/frontend-js/testFiles/apiCalls/projects/complex_model_with_submaps/models/all/bioEntities.search/count=100&perfectMatch=true&query=s1&token=MOCK_TOKEN_ID& b/frontend-js/testFiles/apiCalls/projects/complex_model_with_submaps/models/all/bioEntities.search/count=100&perfectMatch=true&query=s1&token=MOCK_TOKEN_ID&
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EW_PROJECT","value":0},{"objectId":21430,"type":"VIEW_PROJECT","value":1},{"objectId":null,"type":"VIEW_PROJECT","value":1},{"objectId":14898,"type":"EDIT_COMMENTS_PROJECT","value":0},{"objectId":15763,"type":"EDIT_COMMENTS_PROJECT","value":0},{"objectId":15764,"type":"EDIT_COMMENTS_PROJECT","value":0},{"objectId":16668,"type":"EDIT_COMMENTS_PROJECT","value":0},{"objectId":17051,"type":"EDIT_COMMENTS_PROJECT","value":0},{"objectId":18039,"type":"EDIT_COMMENTS_PROJECT","value":0},{"objectId":18115,"type":"EDIT_COMMENTS_PROJECT","value":0},{"objectId":19102,"type":"EDIT_COMMENTS_PROJECT","value":0},{"objectId":19103,"type":"EDIT_COMMENTS_PROJECT","value":0},{"objectId":19184,"type":"EDIT_COMMENTS_PROJECT","value":0},{"objectId":19186,"type":"EDIT_COMMENTS_PROJECT","value":0},{"objectId":19187,"type":"EDIT_COMMENTS_PROJECT","value":0},{"objectId":21430,"type":"EDIT_COMMENTS_PROJECT","value":1},{"objectId":null,"type":"EDIT_COMMENTS_PROJECT","value":0},{"objectId":14898,"type":"LAYOUT_MANAGEMENT","value":0},{"objectId":15763,"type":"LAYOUT_MANAGEMENT","value":0},{"objectId":15764,"type":"LAYOUT_MANAGEMENT","value":0},{"objectId":16668,"type":"LAYOUT_MANAGEMENT","value":0},{"objectId":17051,"type":"LAYOUT_MANAGEMENT","value":0},{"objectId":18039,"type":"LAYOUT_MANAGEMENT","value":0},{"objectId":18115,"type":"LAYOUT_MANAGEMENT","value":0},{"objectId":19102,"type":"LAYOUT_MANAGEMENT","value":0},{"objectId":19103,"type":"LAYOUT_MANAGEMENT","value":0},{"objectId":19184,"type":"LAYOUT_MANAGEMENT","value":0},{"objectId":19186,"type":"LAYOUT_MANAGEMENT","value":0},{"objectId":19187,"type":"LAYOUT_MANAGEMENT","value":0},{"objectId":null,"type":"LAYOUT_MANAGEMENT","value":0},{"type":"ADD_MAP","value":0},{"type":"MANAGE_GENOMES","value":0},{"type":"CONFIGURATION_MANAGE","value":0},{"type":"USER_MANAGEMENT","value":0},{"type":"CUSTOM_LAYOUTS","value":1},{"type":"PROJECT_MANAGEMENT","value":0},{"type":"CUSTOM_LAYOUTS_AVAILABLE","value":1}],"removed":false,"simpleColor":null,"surname":""}]
\ No newline at end of file
diff --git a/frontend-js/testFiles/plugin-invalid/unclean-unregister.js b/frontend-js/testFiles/plugin-invalid/unclean-unregister.js
index a7c00e2c55824505ed6740963cab18960fd29d72..b2a5409bea73e1852872d6e0388251a918f3aec5 100644
--- a/frontend-js/testFiles/plugin-invalid/unclean-unregister.js
+++ b/frontend-js/testFiles/plugin-invalid/unclean-unregister.js
@@ -1,7 +1,7 @@
minervaDefine(function () {
return {
register: function (minervaObject) {
- options = {
+ var options = {
dbOverlayName: "search",
type: "onSearch",
callback: function (elements) {
diff --git a/minerva-big/5918/miRTarBase_SE_WR.xls b/minerva-big/5918/miRTarBase_SE_WR.xls
deleted file mode 100644
index 468d4c1038085692575caccd95fc27c0611692c4..0000000000000000000000000000000000000000
Binary files a/minerva-big/5918/miRTarBase_SE_WR.xls and /dev/null differ
diff --git a/model/src/main/java/lcsb/mapviewer/model/Project.java b/model/src/main/java/lcsb/mapviewer/model/Project.java
index 5589b8b1a935833c777e230542b10ad9a6bf4b93..1d829734bbce08315781b05882fbd9832007ec7c 100644
--- a/model/src/main/java/lcsb/mapviewer/model/Project.java
+++ b/model/src/main/java/lcsb/mapviewer/model/Project.java
@@ -2,6 +2,7 @@ package lcsb.mapviewer.model;
import java.io.Serializable;
import java.util.ArrayList;
+import java.util.Calendar;
import java.util.HashSet;
import java.util.List;
import java.util.Set;
@@ -31,6 +32,7 @@ import org.hibernate.annotations.LazyCollectionOption;
import lcsb.mapviewer.common.EventStorageLoggerAppender;
import lcsb.mapviewer.common.exception.InvalidArgumentException;
import lcsb.mapviewer.model.cache.UploadedFileEntry;
+import lcsb.mapviewer.model.graphics.MapCanvasType;
import lcsb.mapviewer.model.map.MiriamData;
import lcsb.mapviewer.model.map.OverviewImage;
import lcsb.mapviewer.model.map.OverviewImageLink;
@@ -123,6 +125,16 @@ public class Project implements Serializable {
@Column(columnDefinition = "TEXT")
private String warnings;
+ /**
+ * Which "maps" implementation should be used for frontend visualization.
+ */
+ @Enumerated(EnumType.STRING)
+ @Column(name = "map_canvas_type")
+ private MapCanvasType mapCanvasType = MapCanvasType.OPEN_LAYERS;
+
+ @Column(name = "google_map_license_accept_date")
+ private Calendar googleMapLicenseAcceptDate;
+
/**
* Map models in the project.
*/
@@ -586,4 +598,28 @@ public class Project implements Serializable {
this.notifyEmail = notifyEmail;
}
+ public MapCanvasType getMapCanvasType() {
+ return mapCanvasType;
+ }
+
+ public void setMapCanvasType(MapCanvasType mapCanvasType) {
+ MapCanvasType oldMapCanvasType = this.mapCanvasType;
+ this.mapCanvasType = mapCanvasType;
+ if (!mapCanvasType.equals(oldMapCanvasType)) {
+ if (mapCanvasType.equals(MapCanvasType.GOOGLE_MAPS_API)) {
+ this.setGoogleMapLicenseAcceptDate(Calendar.getInstance());
+ } else {
+ this.setGoogleMapLicenseAcceptDate(null);
+ }
+ }
+ }
+
+ public Calendar getGoogleMapLicenseAcceptDate() {
+ return googleMapLicenseAcceptDate;
+ }
+
+ public void setGoogleMapLicenseAcceptDate(Calendar googleMapLicenseAcceptDate) {
+ this.googleMapLicenseAcceptDate = googleMapLicenseAcceptDate;
+ }
+
}
diff --git a/model/src/main/java/lcsb/mapviewer/model/graphics/MapCanvasType.java b/model/src/main/java/lcsb/mapviewer/model/graphics/MapCanvasType.java
new file mode 100644
index 0000000000000000000000000000000000000000..0c400788d7e4865f11fde81154da21742b784a60
--- /dev/null
+++ b/model/src/main/java/lcsb/mapviewer/model/graphics/MapCanvasType.java
@@ -0,0 +1,15 @@
+package lcsb.mapviewer.model.graphics;
+
+public enum MapCanvasType {
+ GOOGLE_MAPS_API("Google Maps API"), OPEN_LAYERS("OpenLayers");
+
+ private String commonName;
+
+ private MapCanvasType(String commonName) {
+ this.commonName = commonName;
+ }
+
+ public String getCommonName() {
+ return commonName;
+ }
+}
diff --git a/persist/src/db/12.1.0~alpha.0/fix_db_20180427.sql b/persist/src/db/12.1.0~alpha.0/fix_db_20180427.sql
new file mode 100644
index 0000000000000000000000000000000000000000..011dc4e9df30d77f9f92b0020852803fbb0c6533
--- /dev/null
+++ b/persist/src/db/12.1.0~alpha.0/fix_db_20180427.sql
@@ -0,0 +1,4 @@
+-- alternative implementation of map canvas
+
+alter table project_table add column google_map_license_accept_date timestamp without time zone;
+alter table project_table add column map_canvas_type character varying default 'OPEN_LAYERS';
diff --git a/rest-api/src/main/java/lcsb/mapviewer/api/configuration/ConfigurationController.java b/rest-api/src/main/java/lcsb/mapviewer/api/configuration/ConfigurationController.java
index 49598e55f6f0d1d90492ce398b39e403880c973f..a9458b014847c70283a0e5a5a5e5f1ef2a1c74a1 100644
--- a/rest-api/src/main/java/lcsb/mapviewer/api/configuration/ConfigurationController.java
+++ b/rest-api/src/main/java/lcsb/mapviewer/api/configuration/ConfigurationController.java
@@ -51,6 +51,7 @@ public class ConfigurationController extends BaseController {
result.put("reactionTypes", configurationController.getReactionTypes(token));
result.put("miriamTypes", configurationController.getMiriamTypes(token));
result.put("mapTypes", configurationController.getMapTypes(token));
+ result.put("mapCanvasTypes", configurationController.getMapCanvasTypes(token));
result.put("unitTypes", configurationController.getUnitTypes(token));
result.put("modificationStateTypes", configurationController.getModificationStateTypes(token));
result.put("privilegeTypes", configurationController.getPrivilegeTypes(token));
diff --git a/rest-api/src/main/java/lcsb/mapviewer/api/configuration/ConfigurationRestImpl.java b/rest-api/src/main/java/lcsb/mapviewer/api/configuration/ConfigurationRestImpl.java
index b1442aa52b5ef6dffe8ae527ea08b15ca853d2cf..544664a32b3d1e5b4f7a3ddbf498a1b8f4512b2d 100644
--- a/rest-api/src/main/java/lcsb/mapviewer/api/configuration/ConfigurationRestImpl.java
+++ b/rest-api/src/main/java/lcsb/mapviewer/api/configuration/ConfigurationRestImpl.java
@@ -22,6 +22,7 @@ import lcsb.mapviewer.common.Pair;
import lcsb.mapviewer.converter.IConverter;
import lcsb.mapviewer.converter.graphics.AbstractImageGenerator;
import lcsb.mapviewer.converter.graphics.ImageGenerators;
+import lcsb.mapviewer.model.graphics.MapCanvasType;
import lcsb.mapviewer.model.map.MiriamType;
import lcsb.mapviewer.model.map.kinetics.SbmlUnitType;
import lcsb.mapviewer.model.map.model.SubmodelType;
@@ -260,6 +261,17 @@ public class ConfigurationRestImpl extends BaseRestImpl {
return result;
}
+ public List<Map<String, Object>> getMapCanvasTypes(String token) {
+ List<Map<String, Object>> result = new ArrayList<>();
+ for (MapCanvasType type : MapCanvasType.values()) {
+ Map<String, Object> row = new TreeMap<>();
+ row.put("id", type.name());
+ row.put("name", type.getCommonName());
+ result.add(row);
+ }
+ return result;
+ }
+
public Map<String, Object> updateOption(String token, String option, Map<String, Object> data)
throws SecurityException {
if (!getUserService().userHasPrivilege(token, PrivilegeType.CONFIGURATION_MANAGE)) {
diff --git a/rest-api/src/main/java/lcsb/mapviewer/api/projects/ProjectRestImpl.java b/rest-api/src/main/java/lcsb/mapviewer/api/projects/ProjectRestImpl.java
index 335215814651a14a4f58c20c78cdaab2170fa89a..186bd31e2c0900d7f53e84e4f387af0d7d0a1933 100644
--- a/rest-api/src/main/java/lcsb/mapviewer/api/projects/ProjectRestImpl.java
+++ b/rest-api/src/main/java/lcsb/mapviewer/api/projects/ProjectRestImpl.java
@@ -24,6 +24,7 @@ import java.util.TreeMap;
import org.apache.commons.io.IOUtils;
import org.apache.log4j.Logger;
+import org.primefaces.model.map.LatLng;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.transaction.annotation.Transactional;
import org.springframework.util.MultiValueMap;
@@ -55,6 +56,7 @@ import lcsb.mapviewer.converter.zip.ZipEntryFile;
import lcsb.mapviewer.model.Project;
import lcsb.mapviewer.model.cache.FileEntry;
import lcsb.mapviewer.model.cache.UploadedFileEntry;
+import lcsb.mapviewer.model.graphics.MapCanvasType;
import lcsb.mapviewer.model.map.BioEntity;
import lcsb.mapviewer.model.map.InconsistentModelException;
import lcsb.mapviewer.model.map.MiriamData;
@@ -81,7 +83,6 @@ import lcsb.mapviewer.services.interfaces.IProjectService;
import lcsb.mapviewer.services.utils.ColorSchemaReader;
import lcsb.mapviewer.services.utils.CreateProjectParams;
import lcsb.mapviewer.services.utils.data.BuildInLayout;
-import lcsb.mapviewer.services.utils.gmap.CoordinationConverter;
@Transactional(value = "txManager")
public class ProjectRestImpl extends BaseRestImpl {
@@ -149,6 +150,7 @@ public class ProjectRestImpl extends BaseRestImpl {
result.put("errors", project.getErrors() != null && !project.getErrors().isEmpty());
result.put("name", project.getName());
result.put("projectId", project.getProjectId());
+ result.put("mapCanvasType", project.getMapCanvasType());
List<Map<String, Object>> images = new ArrayList<>();
for (OverviewImage image : project.getOverviewImages()) {
@@ -288,13 +290,12 @@ public class ProjectRestImpl extends BaseRestImpl {
level = Integer.valueOf(zoomLevel);
}
- // transform polygon
- CoordinationConverter cc = new CoordinationConverter(colorModel);
+ Path2D polygon = stringToPolygon(polygonString, colorModel);
+
Double minX = originalModel.getWidth();
Double minY = originalModel.getHeight();
Double maxX = 0.0;
Double maxY = 0.0;
- Path2D polygon = cc.latLngToPolygon(polygonString);
PathIterator pathIter = polygon.getPathIterator(null);
while (!pathIter.isDone()) {
@@ -356,6 +357,36 @@ public class ProjectRestImpl extends BaseRestImpl {
}
+ private Path2D stringToPolygon(String polygonString, Model colorModel) {
+ String[] stringPointArray = polygonString.split(";");
+
+ List<Point2D> points = new ArrayList<>();
+ for (String string : stringPointArray) {
+ if (!string.trim().equals("")) {
+ double x = Double.valueOf(string.split(",")[0]);
+ double y= Double.valueOf(string.split(",")[1]);
+ points.add(new Point2D.Double(x, y));
+ }
+ }
+
+ if (points.size() <= 2) {
+ points.clear();
+ points.add(new Point2D.Double(0, 0));
+ points.add(new Point2D.Double(colorModel.getWidth(), 0));
+ points.add(new Point2D.Double(colorModel.getWidth(), colorModel.getHeight()));
+ points.add(new Point2D.Double(0, colorModel.getHeight()));
+ }
+
+ Path2D polygon = new Path2D.Double();
+ polygon.moveTo(points.get(0).getX(), points.get(0).getY());
+ for (int i = 1; i < points.size(); i++) {
+ Point2D point = points.get(i);
+ polygon.lineTo(point.getX(), point.getY());
+ }
+ polygon.closePath();
+ return polygon;
+ }
+
private List<Integer> deserializeIdList(String overlayIds) {
List<Integer> result = new ArrayList<>();
String[] tmp = overlayIds.split(",");
@@ -383,8 +414,7 @@ public class ProjectRestImpl extends BaseRestImpl {
throw new ObjectNotFoundException("Model with given id doesn't exist");
}
- CoordinationConverter cc = new CoordinationConverter(originalModel);
- Path2D polygon = cc.latLngToPolygon(polygonString);
+ Path2D polygon = stringToPolygon(polygonString, originalModel);
// create model bounded by the polygon
SubModelCommand subModelCommand = new SubModelCommand(originalModel, polygon);
@@ -520,6 +550,14 @@ public class ProjectRestImpl extends BaseRestImpl {
} else if (fieldName.equalsIgnoreCase("disease")) {
MiriamData disease = updateMiriamData(project.getDisease(), value);
project.setDisease(disease);
+ } else if (fieldName.equalsIgnoreCase("mapCanvasType")) {
+ MapCanvasType mapCanvasType;
+ try {
+ mapCanvasType = MapCanvasType.valueOf(stringValue);
+ } catch (Exception e) {
+ throw new QueryException("Invalid mapCanvasType value");
+ }
+ project.setMapCanvasType(mapCanvasType);
} else {
throw new QueryException("Unknown field: " + fieldName);
}
@@ -599,6 +637,14 @@ public class ProjectRestImpl extends BaseRestImpl {
params.semanticZoom(getFirstValue(data.get("semantic-zoom")));
params.version(getFirstValue(data.get("version")));
params.annotations(getFirstValue(data.get("annotate")));
+ MapCanvasType mapCanvasType;
+ try {
+ mapCanvasType = MapCanvasType.valueOf(getFirstValue(data.get("mapCanvasType")));
+ } catch (Exception e) {
+ throw new QueryException("Invalid mapCanvasType value");
+ }
+ params.mapCanvasType(mapCanvasType);
+
if (params.isUpdateAnnotations()) {
params.annotatorsMap(projectService.createClassAnnotatorTree(user));
}
diff --git a/service/src/main/java/lcsb/mapviewer/services/impl/ProjectService.java b/service/src/main/java/lcsb/mapviewer/services/impl/ProjectService.java
index 369a65f3bf83b55e3796517fd58fa36a4e8d6475..b79e0ef37258f9217ede64927ce122ad8b7148a5 100644
--- a/service/src/main/java/lcsb/mapviewer/services/impl/ProjectService.java
+++ b/service/src/main/java/lcsb/mapviewer/services/impl/ProjectService.java
@@ -5,6 +5,7 @@ import java.io.FileInputStream;
import java.io.FileNotFoundException;
import java.io.IOException;
import java.util.ArrayList;
+import java.util.Calendar;
import java.util.Collection;
import java.util.Collections;
import java.util.HashMap;
@@ -59,6 +60,7 @@ import lcsb.mapviewer.converter.zip.ZipEntryFile;
import lcsb.mapviewer.model.Project;
import lcsb.mapviewer.model.ProjectStatus;
import lcsb.mapviewer.model.cache.UploadedFileEntry;
+import lcsb.mapviewer.model.graphics.MapCanvasType;
import lcsb.mapviewer.model.log.LogType;
import lcsb.mapviewer.model.map.BioEntity;
import lcsb.mapviewer.model.map.MiriamData;
@@ -787,6 +789,7 @@ public class ProjectService implements IProjectService {
if (params.getOrganism() != null && !params.getOrganism().isEmpty()) {
organism = new MiriamData(MiriamType.TAXONOMY, params.getOrganism());
}
+ project.setMapCanvasType(params.getMapCanvasType());
project.setVersion(params.getVersion());
projectDao.add(project);
if (params.isAsync()) {
diff --git a/service/src/main/java/lcsb/mapviewer/services/utils/CreateProjectParams.java b/service/src/main/java/lcsb/mapviewer/services/utils/CreateProjectParams.java
index 451ed2a5d46f8fef5f6759eaa58b6a28df3ab193..aa3cf038b8ef5595a537c69d0d500ef8ba49da79 100644
--- a/service/src/main/java/lcsb/mapviewer/services/utils/CreateProjectParams.java
+++ b/service/src/main/java/lcsb/mapviewer/services/utils/CreateProjectParams.java
@@ -18,6 +18,7 @@ import org.primefaces.model.TreeNode;
import lcsb.mapviewer.converter.IConverter;
import lcsb.mapviewer.converter.zip.ZipEntryFile;
+import lcsb.mapviewer.model.graphics.MapCanvasType;
import lcsb.mapviewer.model.map.BioEntity;
import lcsb.mapviewer.model.map.MiriamType;
import lcsb.mapviewer.model.user.UserAnnotatorsParam;
@@ -166,6 +167,8 @@ public class CreateProjectParams {
*/
private List<UserAnnotatorsParam> annotatorsParams = new ArrayList<>();
+ private MapCanvasType mapCanvasType = MapCanvasType.OPEN_LAYERS;
+
/**
* @param projectId
* the projectId to set
@@ -803,4 +806,13 @@ public class CreateProjectParams {
return this.analyzeAnnotations("true".equalsIgnoreCase(value));
}
+ public MapCanvasType getMapCanvasType() {
+ return mapCanvasType;
+ }
+
+ public CreateProjectParams mapCanvasType(MapCanvasType mapCanvasType) {
+ this.mapCanvasType = mapCanvasType;
+ return this;
+ }
+
}
diff --git a/service/src/main/java/lcsb/mapviewer/services/utils/gmap/CoordinationConverter.java b/service/src/main/java/lcsb/mapviewer/services/utils/gmap/CoordinationConverter.java
deleted file mode 100644
index 235ac84cce3ef00bd871e0e416c2b3dd4b0273eb..0000000000000000000000000000000000000000
--- a/service/src/main/java/lcsb/mapviewer/services/utils/gmap/CoordinationConverter.java
+++ /dev/null
@@ -1,236 +0,0 @@
-package lcsb.mapviewer.services.utils.gmap;
-
-import java.awt.geom.Path2D;
-import java.awt.geom.Point2D;
-import java.io.Serializable;
-import java.util.ArrayList;
-import java.util.List;
-
-import org.apache.log4j.Logger;
-import org.primefaces.model.map.LatLng;
-
-import lcsb.mapviewer.common.Configuration;
-import lcsb.mapviewer.common.exception.InvalidArgumentException;
-import lcsb.mapviewer.model.map.model.Model;
-import lcsb.mapviewer.model.map.model.ModelData;
-
-/**
- * This class is a converter of coordinates from/to gmap coordinates. Class is
- * immutable and defined for specific {@link Model}.
- *
- * @author Piotr Gawron
- *
- */
-public final class CoordinationConverter implements Serializable {
-
- /**
- *
- */
- private static final long serialVersionUID = 1L;
-
- /**
- * Defines how big zoom level factor should be considered when computing
- * search distance on different levels. The value should be in <1.0 - 2.0>
- * range. 1.0 means that when level changes distance will stay the same on all
- * levels. 2.0 means that distance in pixels will remain the same.
- */
- private static final double ZOOM_FACTOR_PER_LEVEL = 1.5;
-
- /**
- * Full angle in degrees.
- */
- private static final int FULL_ANGLE_IN_DEGREES = 360;
-
- /**
- * Default class logger.
- */
- @SuppressWarnings("unused")
- private static Logger logger = Logger.getLogger(CoordinationConverter.class);
-
- /**
- * Take a look at {@link toPoint()}.
- */
-
- private static final double MAX_SIN_VAL = 0.9999;
-
- /**
- * What is the zoom factor on the lowest level.
- */
- private final double zoomFactor;
- /**
- * What is the max zoom level (in our terminology the lowest level).
- */
- private final int maxZoomLevel;
- /**
- * Size of the tile used by map API.
- */
- private final double tileSize;
- /**
- * How many pixels are used for longitude degree.
- */
- private final double pixelsPerLonDegree;
- /**
- * How many pixels are used for longitude radian.
- */
- private final double pixelsPerLonRadian;
- /**
- * This should define the origin of the map in the google maps API. It's
- * strange but it works :).
- */
- private final Point2D pixelOrigin;
-
- private Double width;
-
- private Double height;
-
- /**
- * Bounds value in the optMin, optMax range.
- *
- * @param value
- * value to be bounded
- * @param optMin
- * minimum acceptable value
- * @param optMax
- * maximum acceptable value
- * @return value closest to inital but in optMin, optMax range
- */
- private double bound(double value, double optMin, double optMax) {
- double result = Math.max(value, optMin);
- result = Math.min(result, optMax);
- return result;
- }
-
- /**
- * Default constructor. Initializes all converter parameters for the given
- * model.
- *
- * @param model
- * {@link Model} for which converter is created
- */
- public CoordinationConverter(Model model) {
- this(model.getModelData());
- }
-
- /**
- * Default constructor. Initializes all converter parameters for the given
- * model.
- *
- * @param model
- * {@link ModelData} for which converter is created
- */
- public CoordinationConverter(ModelData model) {
- if (model.getTileSize() == 0) {
- throw new InvalidArgumentException("Size of tile cannot be 0.");
- }
- zoomFactor = (Math.max(model.getWidth(), model.getHeight())) / ((double) (model.getTileSize()) / ((double) (1 << Configuration.MIN_ZOOM_LEVEL)));
- maxZoomLevel = model.getZoomLevels() + Configuration.MIN_ZOOM_LEVEL;
- tileSize = model.getTileSize();
- pixelOrigin = new Point2D.Double(tileSize / 2, tileSize / 2);
- pixelsPerLonDegree = tileSize / FULL_ANGLE_IN_DEGREES;
- pixelsPerLonRadian = tileSize / (2 * Math.PI);
- width = model.getWidth();
- height = model.getHeight();
- }
-
- /**
- * Transform lat, long coordinates into x,y coordinates.
- *
- * @param latLng
- * coordinates in lat long format
- * @return absolute x,y coordinates
- */
- public Point2D toPoint(LatLng latLng) {
- Point2D origin = pixelOrigin;
-
- double x = origin.getX() + latLng.getLng() * pixelsPerLonDegree;
-
- // NOTE(appleton): Truncating to 0.9999 effectively limits latitude to
- // 89.189. This is about a third of a tile past the edge of the world
- // tile.
- double siny = bound(Math.sin(Math.toRadians(latLng.getLat())), -MAX_SIN_VAL, MAX_SIN_VAL);
- double y = origin.getY() + Math.log((1 + siny) / (1 - siny)) / 2.0 * -pixelsPerLonRadian;
-
- x *= zoomFactor;
- y *= zoomFactor;
- return new Point2D.Double(x, y);
- };
-
- /**
- * Transforms absolute x,y coordinates into lat long coordinate system.
- *
- * @param param
- * absolute x,y coordinate
- * @return lat long coordinate
- */
- public LatLng toLatLng(Point2D param) {
- Point2D point = new Point2D.Double(param.getX() / zoomFactor, param.getY() / zoomFactor);
- Point2D origin = pixelOrigin;
- double lng = (point.getX() - origin.getX()) / pixelsPerLonDegree;
- double latRadians = (point.getY() - origin.getY()) / -pixelsPerLonRadian;
- double lat = Math.toDegrees(2 * Math.atan(Math.exp(latRadians)) - Math.PI / 2);
- return new LatLng(lat, lng);
- }
-
- /**
- * Transforms polygon described with set of lat long coordinates into
- * {@link Path2D} object trat represents polgyon in absolute coordinates.
- *
- * @param latLngPolygon
- * string representing polygon in latlng format. Points are separated
- * by ";" character. lat from lng coordinate is separated by ",".
- * absolute x,y coordinate
- * @return polygon in absolute coordinates
- */
- public Path2D latLngToPolygon(String latLngPolygon) {
- String[] latLngArray = latLngPolygon.split(";");
-
- List<Point2D> points = new ArrayList<>();
- for (String string : latLngArray) {
- if (!string.trim().equals("")) {
- double lat = Double.valueOf(string.split(",")[0]);
- double lng = Double.valueOf(string.split(",")[1]);
- if (lng > 0) {
- lng -= FULL_ANGLE_IN_DEGREES;
- }
- LatLng latLng = new LatLng(lat, lng);
- points.add(toPoint(latLng));
- }
- }
- if (points.size() <= 2) {
- points.clear();
- points.add(new Point2D.Double(0, 0));
- points.add(new Point2D.Double(width, 0));
- points.add(new Point2D.Double(width, height));
- points.add(new Point2D.Double(0, height));
- }
- Path2D result = new Path2D.Double();
- result.moveTo(points.get(0).getX(), points.get(0).getY());
- for (int i = 1; i < points.size(); i++) {
- Point2D point = points.get(i);
- result.lineTo(point.getX(), point.getY());
- }
- result.closePath();
- return result;
- }
-
- /**
- * Computes distance that should be used on different zoom levels.
- *
- * @param searchDistance
- * distance that should be used on the deepest level
- * @param zoomLevel
- * ratio that describes how much the distance should change on higher
- * levels
- * @return distance that should be used on zoomLevel
- */
- public double scale(double searchDistance, String zoomLevel) {
- int levels = 0;
- if (zoomLevel == null || zoomLevel.equals("")) {
- levels = maxZoomLevel - Configuration.MIN_ZOOM_LEVEL;
- } else {
- levels = maxZoomLevel - Integer.valueOf(zoomLevel);
- }
- return Math.pow(ZOOM_FACTOR_PER_LEVEL, levels) * searchDistance;
- };
-
-}
diff --git a/service/src/main/java/lcsb/mapviewer/services/utils/gmap/GsonExclusionChebiTreeStrategy.java b/service/src/main/java/lcsb/mapviewer/services/utils/gmap/GsonExclusionChebiTreeStrategy.java
deleted file mode 100644
index b1d67edf5b4611d2faf204c511a40a3784ce892d..0000000000000000000000000000000000000000
--- a/service/src/main/java/lcsb/mapviewer/services/utils/gmap/GsonExclusionChebiTreeStrategy.java
+++ /dev/null
@@ -1,32 +0,0 @@
-package lcsb.mapviewer.services.utils.gmap;
-
-import org.primefaces.model.DefaultTreeNode;
-
-import com.google.gson.ExclusionStrategy;
-import com.google.gson.FieldAttributes;
-
-/**
- * This object imlements an exclusion strategy that forbides to serialize
- * "Chebi Tree" like objects. This kind of objects are represented as
- * {@link DefaultTreeNode} class.
- *
- * @author Piotr Gawron
- *
- */
-public class GsonExclusionChebiTreeStrategy implements ExclusionStrategy {
-
- @Override
- public boolean shouldSkipClass(Class<?> arg0) {
- if (DefaultTreeNode.class.isAssignableFrom(arg0)) {
- return true;
- }
- return false;
- }
-
- @Override
- public boolean shouldSkipField(FieldAttributes fa) {
- return false;
-
- }
-
-}
diff --git a/service/src/main/java/lcsb/mapviewer/services/utils/gmap/GsonExclusionParentStrategy.java b/service/src/main/java/lcsb/mapviewer/services/utils/gmap/GsonExclusionParentStrategy.java
deleted file mode 100644
index be78908fb12803529bf7d9a83041a7a7f2fd8786..0000000000000000000000000000000000000000
--- a/service/src/main/java/lcsb/mapviewer/services/utils/gmap/GsonExclusionParentStrategy.java
+++ /dev/null
@@ -1,30 +0,0 @@
-package lcsb.mapviewer.services.utils.gmap;
-
-import com.google.gson.ExclusionStrategy;
-import com.google.gson.FieldAttributes;
-
-/**
- * This object imlements an exclusion strategy that forbides to serialize parent
- * objects. The main reason is to prevent cyclic serialization in a tree-like
- * structures.
- *
- * @author Piotr Gawron
- *
- */
-public class GsonExclusionParentStrategy implements ExclusionStrategy {
-
- @Override
- public boolean shouldSkipClass(Class<?> arg0) {
- return false;
- }
-
- @Override
- public boolean shouldSkipField(FieldAttributes fa) {
- // String className = fa.getDeclaringClass().getName();
- String fieldName = fa.getName();
-
- return fieldName.equals("parent");
-
- }
-
-}
diff --git a/service/src/main/java/lcsb/mapviewer/services/utils/gmap/package-info.java b/service/src/main/java/lcsb/mapviewer/services/utils/gmap/package-info.java
deleted file mode 100644
index b30267e7e91931cb7c83155cef85bc94c90bf700..0000000000000000000000000000000000000000
--- a/service/src/main/java/lcsb/mapviewer/services/utils/gmap/package-info.java
+++ /dev/null
@@ -1,6 +0,0 @@
-/**
- * This package contains utility that convert data into structures that could be
- * visualized on client side (search engine or google map API).
- */
-package lcsb.mapviewer.services.utils.gmap;
-
diff --git a/service/src/test/java/lcsb/mapviewer/services/utils/AllUtilsTests.java b/service/src/test/java/lcsb/mapviewer/services/utils/AllUtilsTests.java
index 67ec10958c5bae957e935e7ed752b9aa8157c1d8..e966305a09583b662ec1d6eee0d392762a09c0ac 100644
--- a/service/src/test/java/lcsb/mapviewer/services/utils/AllUtilsTests.java
+++ b/service/src/test/java/lcsb/mapviewer/services/utils/AllUtilsTests.java
@@ -4,14 +4,11 @@ import org.junit.runner.RunWith;
import org.junit.runners.Suite;
import org.junit.runners.Suite.SuiteClasses;
-import lcsb.mapviewer.services.utils.gmap.AllGmapUtilsTests;
-
@RunWith(Suite.class)
-@SuiteClasses({ AllGmapUtilsTests.class, //
- ColorSchemaReaderTest.class, //
- ColorSchemaReaderXlsTest.class, //
- ColorSchemaReaderXlsxTest.class, //
- EmailSenderTest.class,//
+@SuiteClasses({ ColorSchemaReaderTest.class, //
+ ColorSchemaReaderXlsTest.class, //
+ ColorSchemaReaderXlsxTest.class, //
+ EmailSenderTest.class,//
})
public class AllUtilsTests {
diff --git a/service/src/test/java/lcsb/mapviewer/services/utils/gmap/AllGmapUtilsTests.java b/service/src/test/java/lcsb/mapviewer/services/utils/gmap/AllGmapUtilsTests.java
deleted file mode 100644
index 0773c42e4a12e742e66caef4a885938632827c3d..0000000000000000000000000000000000000000
--- a/service/src/test/java/lcsb/mapviewer/services/utils/gmap/AllGmapUtilsTests.java
+++ /dev/null
@@ -1,12 +0,0 @@
-package lcsb.mapviewer.services.utils.gmap;
-
-import org.junit.runner.RunWith;
-import org.junit.runners.Suite;
-import org.junit.runners.Suite.SuiteClasses;
-
-@RunWith(Suite.class)
-@SuiteClasses({ CoordinationConverterTest.class, //
-})
-public class AllGmapUtilsTests {
-
-}
diff --git a/service/src/test/java/lcsb/mapviewer/services/utils/gmap/CoordinationConverterTest.java b/service/src/test/java/lcsb/mapviewer/services/utils/gmap/CoordinationConverterTest.java
deleted file mode 100644
index dd9abb96fa1291e0ed01470ac7709b1077e26501..0000000000000000000000000000000000000000
--- a/service/src/test/java/lcsb/mapviewer/services/utils/gmap/CoordinationConverterTest.java
+++ /dev/null
@@ -1,126 +0,0 @@
-package lcsb.mapviewer.services.utils.gmap;
-
-import static org.junit.Assert.assertEquals;
-import static org.junit.Assert.assertTrue;
-import static org.junit.Assert.fail;
-
-import java.awt.geom.Path2D;
-import java.awt.geom.PathIterator;
-import java.awt.geom.Point2D;
-
-import lcsb.mapviewer.model.map.layout.Layout;
-import lcsb.mapviewer.model.map.model.Model;
-import lcsb.mapviewer.model.map.model.ModelFullIndexed;
-import lcsb.mapviewer.services.ServiceTestFunctions;
-
-import org.apache.commons.lang3.SerializationUtils;
-import org.apache.log4j.Logger;
-import org.junit.After;
-import org.junit.Before;
-import org.junit.Test;
-import org.primefaces.model.map.LatLng;
-
-public class CoordinationConverterTest extends ServiceTestFunctions {
-
- Logger logger = Logger.getLogger(CoordinationConverterTest.class);
- LatLng latLng = new LatLng(81.49230582149616, -124.1015625);
- Point2D point = new Point2D.Double(12428.0859375, 6917.519531249969);
- private Model model;
-
- @Before
- public void setUp() throws Exception {
- model = new ModelFullIndexed(null);
- model.setWidth(20010);
- model.setHeight(20010);
- model.setTileSize(256);
- model.setZoomLevels(7);
- model.addLayout(new Layout());
- }
-
- @After
- public void tearDown() throws Exception {
- }
-
- @Test
- public void testToLatLng() {
- try {
- CoordinationConverter converter = new CoordinationConverter(model);
- LatLng latLng2 = converter.toLatLng(point);
- assertEquals(Math.abs(latLng.getLat() - latLng2.getLat()) + Math.abs(latLng.getLng() - latLng2.getLng()), 0, EPSILON);
- } catch (Exception e) {
- e.printStackTrace();
- fail("Unknown exception occured");
- }
- }
-
- @Test
- public void testToPoint() {
- try {
- CoordinationConverter converter = new CoordinationConverter(model);
- Point2D point2 = converter.toPoint(latLng);
- assertEquals(0, point.distance(point2), EPSILON);
- } catch (Exception e) {
- e.printStackTrace();
- fail("Unknown exception occured");
- }
- }
-
- @Test
- public void testConvertPolygon() throws Exception {
- try {
- String latLngPolgyn = "84.21868256860863,164.619140625;83.3391531415795,-152.841796875;82.38497296909799,-171.1669921875;84.29345033920028,-178.1103515625;";
-
- CoordinationConverter converter = new CoordinationConverter(model);
-
- Path2D polygon = converter.latLngToPolygon(latLngPolgyn);
- PathIterator pi = polygon.getPathIterator(null);
- int counter = 0;
- while (!pi.isDone()) {
- double[] value = new double[6];
- int type = pi.currentSegment(value);
- if (type == PathIterator.SEG_MOVETO)
- counter = 1;
- else if (type == PathIterator.SEG_LINETO)
- counter++;
- pi.next();
- }
- assertEquals(4, counter);
- } catch (Exception e) {
- e.printStackTrace();
- throw e;
- }
-
- }
-
- @Test
- public void testToLatLng2() {
- try {
- Model m = new ModelFullIndexed(null);
- m.setWidth(26547.3333333333);
- m.setHeight(26547.3333333333);
- m.setZoomLevels(8);
- m.setTileSize(256);
- CoordinationConverter converter = new CoordinationConverter(m);
- Point2D p = new Point2D.Double(19920, 11040);
- LatLng latLng2 = converter.toLatLng(p);
- Point2D p2 = converter.toPoint(latLng2);
- assertTrue(p.distance(p2) < EPSILON);
- } catch (Exception e) {
- e.printStackTrace();
- throw e;
- }
- }
-
- @Test
- public void testSerializable() throws Exception {
- try {
- CoordinationConverter converter = new CoordinationConverter(model);
- SerializationUtils.serialize(converter);
- } catch (Exception e) {
- e.printStackTrace();
- throw e;
- }
-
- }
-
-}
diff --git a/web/src/main/webapp/admin.xhtml b/web/src/main/webapp/admin.xhtml
index dcb64ae493fb8d508a330056aaad14f1a082932a..ffce706f121be4ff8f448b0b493133a7aeacc462 100644
--- a/web/src/main/webapp/admin.xhtml
+++ b/web/src/main/webapp/admin.xhtml
@@ -9,8 +9,6 @@
<f:view contentType="text/html">
<h:head>
- <script src="https://maps.google.com/maps/api/js?libraries=drawing&v=3.26" type="text/javascript"/>
-
<script src="https://maxcdn.bootstrapcdn.com/bootstrap/3.3.7/js/bootstrap.min.js" type="text/javascript"/>
<script src="https://twitter.github.io/typeahead.js/releases/latest/typeahead.bundle.min.js" type="text/javascript"/>
diff --git a/web/src/main/webapp/export.xhtml b/web/src/main/webapp/export.xhtml
index 41c263b3d4d65647a50813a4aeef4e6692bde7e8..9cc8006d241fc121748d95d55a9731380579a036 100644
--- a/web/src/main/webapp/export.xhtml
+++ b/web/src/main/webapp/export.xhtml
@@ -9,8 +9,6 @@
<f:view contentType="text/html">
<h:head>
- <script src="https://maps.google.com/maps/api/js?libraries=drawing&v=3.26" type="text/javascript"/>
-
<script src="https://maxcdn.bootstrapcdn.com/bootstrap/3.3.7/js/bootstrap.min.js" type="text/javascript"/>
<script src="https://twitter.github.io/typeahead.js/releases/latest/typeahead.bundle.min.js" type="text/javascript"/>
diff --git a/web/src/main/webapp/index.xhtml b/web/src/main/webapp/index.xhtml
index 87b3437924fdbf96cee1613a7a1c06f6354487b4..fd1b490014ef480fc48d69fbd4d7b6940d9787a3 100644
--- a/web/src/main/webapp/index.xhtml
+++ b/web/src/main/webapp/index.xhtml
@@ -10,10 +10,6 @@
<h:head>
-
- <!-- Google Maps API version 3.20 -->
- <script src="https://maps.google.com/maps/api/js?libraries=drawing" type="text/javascript"/>
-
<script src="https://maxcdn.bootstrapcdn.com/bootstrap/3.3.7/js/bootstrap.min.js" type="text/javascript"/>
<script src="https://twitter.github.io/typeahead.js/releases/latest/typeahead.bundle.min.js" type="text/javascript"/>
diff --git a/web/src/main/webapp/login.xhtml b/web/src/main/webapp/login.xhtml
index af2062f2a1a49b216dd87cd5af4fccbdec895add..11bbdd45549642737e0ce30290664b33d67b5bbd 100644
--- a/web/src/main/webapp/login.xhtml
+++ b/web/src/main/webapp/login.xhtml
@@ -11,11 +11,6 @@
<link rel="shortcut icon" href="./resources/images/favicon.png"
type="image/png" />
- <script
- src="https://maps.google.com/maps/api/js?libraries=drawing&v=3.26"
- type="text/javascript" />
-
-
<script src="https://code.jquery.com/jquery-1.12.1.min.js"></script>
<script src="https://code.jquery.com/ui/1.12.1/jquery-ui.js"></script>
<script