Commit 975471db authored by Piotr Gawron's avatar Piotr Gawron
Browse files

link to eco db was broken

parent 1cdae057
Pipeline #28207 passed with stage
in 12 minutes and 39 seconds
minerva (15.0.0~beta.5) unstable; urgency=medium
* Backward incompatible: truncation/association/dissocation points are
represented as a dot in all new images/uploaded maps (#1265)
* Bug fix: links to Evidence Code Ontology did not appear (#1280)
* Bug fix: export to GPML uses proper arrow types (#1262)
* Bug fix: export to GPML uses dashed lines in reactions when possible
(#1262)
......@@ -20,8 +21,6 @@ minerva (15.0.0~beta.5) unstable; urgency=medium
break upload (#1273)
* Bug fix: export from minerva does not include SemanticZoom terms for text
notes (#1287)
* Bug fix: import from GPML introduces space between inhibition and process
(#1270)
-- Piotr Gawron <piotr.gawron@uni.lu> Tue, 2 Jun 2020 16:00:00 +0200
......
......@@ -91,7 +91,6 @@ public class MiriamConnectorTest extends AnnotationTestFunctions {
}
if (!deprecated) {
assertTrue("Invalid MiriamType (" + mt + ") for MiriamType: " + mt, miriamConnector.isValidMiriamType(mt));
}
}
......
......@@ -227,6 +227,14 @@ public enum MiriamType {
"ec-code",
"1.1.1.1"),
ECO("Evidence Code Ontology",
"https://www.ebi.ac.uk/ols/ontologies/eco",
new String[] { "urn:miriam:obo.eco", "http://identifiers.org/obo.eco/" },
new Class<?>[] { Protein.class, Gene.class, Rna.class }, "MIR:00000055",
new Class<?>[] {},
"",
"ECO:0000006"),
ECOGENE("EcoGene",
"http://ecogene.org/",
new String[] { "urn:miriam:ecogene", "https://identifiers.org/ecogene/" },
......@@ -268,14 +276,6 @@ public enum MiriamType {
"ncbigene",
"100010"),
ECO("Evidence Code Ontology",
"https://www.ebi.ac.uk/ols/ontologies/eco",
new String[] { "urn:miriam:obo.eco", "http://identifiers.org/obo.eco/" },
new Class<?>[] { Protein.class, Gene.class, Rna.class }, "MIR:00000055",
new Class<?>[] {},
"ECO",
"0000006"),
FLYBASE("FlyBase",
"https://www.alliancegenome.org",
new String[] { "urn:miriam:fb", "urn:miriam:flybase", "https://identifiers.org/fb/" },
......
delete from cache_query_table where query like '%urn:miriam:obo.eco%';
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