diff --git a/CHANGELOG b/CHANGELOG index fa320caa677f5cae434cf2244aa8518f841898be..ecdc2f063ab6459809db21713d10a1f87396c4c1 100644 --- a/CHANGELOG +++ b/CHANGELOG @@ -1,53 +1,14 @@ -minerva (13.1.0~beta.2) unstable; urgency=low - * Bug fix: due to blocking of our requests from ctdbase the autocomplete for - this database is disabled - - -- Piotr Gawron <piotr.gawron@uni.lu> Fri, 12 Jun 2019 17:00:00 +0200 - -minerva (13.1.0~beta.1) unstable; urgency=low - * Small improvement: model_name renamed to map_name in data overlay columns - (#827) - * Small improvement: name, type, reference_genome_type and - reference_genome_version column in genetic variant data overlay are - deprecated (#827) - * Bug fix: deprecated columns in data overlay are not visible to the end user - (#827) - * Bug fix: invalid color in data overlay provides proper feedback to the user - (#822) - * Bug fix: genetic variant overlay without name caused problems (#832) - * Bug fix: tair locus identifiers were used improperly - instead of id the - name was used - * Bug fix: plugin tab header wasn't properly resized after adding plugins - that introduced second line for tab selection (#758) - * Bug fix: invisible layer shouldn't be shown in the on th map (#813) - * Bug fix: list of availbale annotators is sorted alphabetically (#815) - * Bug fix: redirect url from export panel is fixed (#819) - * Bug fix: allow to reupload the same file without closing add overlay dialog - (#833) - * Bug fix: gene_name column is allowed only in the genetic variant data - overlay - * Bug fix: protein types are sorted properly in "Select valid annotations" - dialog (#815) - * Bug fix: if there is a description of (sub)map then it is available in - info/submap panel (#824) - * Bug fix: when changing data in edit user dialog there was a need to click - close button twice (#818) - * Bug fix: empty type for data overlay is allowed (#827) - * Bug fix: genetic variants data overlay was ignoring color parameter (#827) - * Bug fix: pathways can be drawn using glyphs (#825) - * Bug fix: empty background overlay doesn't show glyphs, instead standard - visualization is used (#826) - * Bug fix: asynchronous cals on showing/hiding data overlays might cause - problems due to network latency (#830) - - -- Piotr Gawron <piotr.gawron@uni.lu> Fri, 7 Jun 2019 17:00:00 +0200 - -minerva (13.1.0~beta.0) unstable; urgency=low +minerva (13.1.0) stable; urgency=medium * Feature: annotators are more flexible - you can define set of input and outputs used by annotator (#617) * Feature: changes in admin panel doesn't require saving - they are saved automatically (#676) * Feature: elements can have custom glyphs used for visualization (#487) + * Small improvement: model_name renamed to map_name in data overlay columns + (#827) + * Small improvement: name, type, reference_genome_type and + reference_genome_version column in genetic variant data overlay are + deprecated (#827) * Small improvement: all bio entities have z-index associated with them (#487) * Small improvement: validation of the organism and disease id on map upload @@ -97,6 +58,32 @@ minerva (13.1.0~beta.0) unstable; urgency=low SemanticZoomLevelTransparency (#801) * Small improvement: export/import from SBML support z-index in LAYOUT extension + * Bug fix: due to blocking of our requests from ctdbase the autocomplete for + this database is disabled + * Bug fix: deprecated columns in data overlay are not visible to the end user + (#827) + * Bug fix: invalid color in data overlay provides proper feedback to the user + (#822) + * Bug fix: genetic variant overlay without name caused problems (#832) + * Bug fix: tair locus identifiers were used improperly - instead of id the + name was used + * Bug fix: plugin tab header wasn't properly resized after adding plugins + that introduced second line for tab selection (#758) + * Bug fix: invisible layer shouldn't be shown on the map (#813) + * Bug fix: list of availbale annotators is sorted alphabetically (#815) + * Bug fix: redirect url from export panel is fixed (#819) + * Bug fix: allow to reupload the same file without closing add overlay dialog + (#833) + * Bug fix: gene_name column is allowed only in the genetic variant data + overlay + * Bug fix: protein types are sorted properly in "Select valid annotations" + dialog (#815) + * Bug fix: if there is a description of (sub)map then it is available in + info/submap panel (#824) + * Bug fix: empty type for data overlay is allowed (#827) + * Bug fix: genetic variants data overlay was ignoring color parameter (#827) + * Bug fix: asynchronous calls on showing/hiding data overlays might cause + problems due to network latency (#830) * Bug fix: progress bar of gene genome mapping upload is refreshing properly (#728) * Bug fix: when editing project Disease and Organism could not be removed @@ -115,7 +102,7 @@ minerva (13.1.0~beta.0) unstable; urgency=low * Bug fix: layout data was ignored for some reactions when importing from SBML (#812) - -- Piotr Gawron <piotr.gawron@uni.lu> Mon, 13 May 2019 19:00:00 +0200 + -- Piotr Gawron <piotr.gawron@uni.lu> Thu, 27 Jun 2019 14:00:00 +0200 minerva (13.0.0) stable; urgency=medium * Bug fix: Since Oracle Java cannot be installed as debian dependency we use