From 42c58d142aa01d12931bdf2de466ad4130198a90 Mon Sep 17 00:00:00 2001
From: Piotr Gawron <piotr.gawron@uni.lu>
Date: Fri, 23 Nov 2018 13:05:01 +0100
Subject: [PATCH] taxonomy miriam type recognizes also new urn
---
.../java/lcsb/mapviewer/model/map/MiriamRelationType.java | 7 +++++--
.../src/main/java/lcsb/mapviewer/model/map/MiriamType.java | 3 ++-
2 files changed, 7 insertions(+), 3 deletions(-)
diff --git a/model/src/main/java/lcsb/mapviewer/model/map/MiriamRelationType.java b/model/src/main/java/lcsb/mapviewer/model/map/MiriamRelationType.java
index c0652dc718..6f365b2be9 100644
--- a/model/src/main/java/lcsb/mapviewer/model/map/MiriamRelationType.java
+++ b/model/src/main/java/lcsb/mapviewer/model/map/MiriamRelationType.java
@@ -68,10 +68,13 @@ public enum MiriamRelationType {
/**
* Take a look <a href="http://co.mbine.org/standards/qualifiers">here</a>.
*/
- BQ_BIOL_OCCURES("bqbiol:occures");
+ BQ_BIOL_OCCURES("bqbiol:occures"),
+
+ BQ_BIOL_HAS_TAXON("bqbiol:hasTaxon"),
+ ;
/**
- * String representing relation. List of all possibilites can be found
+ * String representing relation. List of all possibilities can be found
* <a href="http://co.mbine.org/standards/qualifiers">here</a>.
*/
private String stringRepresentation;
diff --git a/model/src/main/java/lcsb/mapviewer/model/map/MiriamType.java b/model/src/main/java/lcsb/mapviewer/model/map/MiriamType.java
index 59acce8638..3e70957ae0 100644
--- a/model/src/main/java/lcsb/mapviewer/model/map/MiriamType.java
+++ b/model/src/main/java/lcsb/mapviewer/model/map/MiriamType.java
@@ -431,8 +431,9 @@ public enum MiriamType {
*/
TAXONOMY("Taxonomy",
"http://www.ncbi.nlm.nih.gov/taxonomy/",
- "urn:miriam:taxonomy",
+ new String[] { "urn:miriam:taxonomy", "http://identifiers.org/taxonomy/" },
new Class<?>[] {}, "MIR:00000006"),
+
/**
* Toxicogenomic: Chemical: http://ctdbase.org/detail.go.
* http://ctdbase.org/detail.go
--
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