warning message improved

CHANGELOG

@@ -11,6 +11,8 @@ minerva (14.0.6) stable; urgency=medium
     (regression 14.0.0, #1057)
   * Bug fix: genetic variant overlay improperly processed elements identified
     by miriam identifiers, like uniprot (#1059)
+  * Bug fix: invalid information was provided for genetic variants overlay when
+    map organism was defined (#1060)
 
  -- Piotr Gawron <piotr.gawron@uni.lu>  Wed, 18 Dec 2019 12:00:00 +0200
 

frontend-js/src/main/js/map/window/AliasInfoWindow.js

@@ -463,7 +463,11 @@ AliasInfoWindow.prototype.createGenomicDiv = function (params) {
     }
     if (geneticInformation) {
       if (genomeUrls.length === 0) {
-        contentElement.innerHTML = "No organism defined for this project, cannot display variant data";
+        if (self.getCustomMap().getProject().getOrganism() === undefined) {
+          contentElement.innerHTML = "No organism defined for this project, cannot display variant data.";
+        } else {
+          contentElement.innerHTML = "No reference genome defined for this MINERVA instance, cannot display variant data.";
+        }
       } else {
         for (i = 0; i < overlaysData.length; i++) {
           if (globalGeneVariants[i].length > 0) {