From 21bd57b32e04a6840b52a83b8eb5d12491e9a497 Mon Sep 17 00:00:00 2001
From: Piotr Gawron <piotr.gawron@uni.lu>
Date: Thu, 14 Jun 2018 13:03:01 +0200
Subject: [PATCH] rhea miriam identifiers are handled properly
---
.../lcsb/mapviewer/model/map/MiriamType.java | 20 +++++++++++++------
1 file changed, 14 insertions(+), 6 deletions(-)
diff --git a/model/src/main/java/lcsb/mapviewer/model/map/MiriamType.java b/model/src/main/java/lcsb/mapviewer/model/map/MiriamType.java
index df27800781..910ab16ccb 100644
--- a/model/src/main/java/lcsb/mapviewer/model/map/MiriamType.java
+++ b/model/src/main/java/lcsb/mapviewer/model/map/MiriamType.java
@@ -373,6 +373,14 @@ public enum MiriamType {
"urn:miriam:refseq", //
new Class<?>[] { Protein.class, Gene.class, Rna.class }, "MIR:00000039"),
+ /**
+ * Rhea: http://www.rhea-db.org/.
+ */
+ RHEA("Rhea", //
+ "http://www.rhea-db.org/", //
+ "urn:miriam:rhea", //
+ new Class<?>[] { Reaction.class }, "MIR:00000082"),
+
/**
* SGD: http://www.yeastgenome.org/.
*/
@@ -494,7 +502,7 @@ public enum MiriamType {
private String commonName;
/**
- * url to homepage of given resource type.
+ * url to home page of given resource type.
*/
private String dbHomepage;
@@ -504,9 +512,9 @@ public enum MiriamType {
private String registryIdentifier;
/**
- * Valid uris to this resource.
+ * Valid URIs to this resource.
*/
- private List<String> uris = new ArrayList<String>();
+ private List<String> uris = new ArrayList<>();
/**
* Classes that can be annotated by this resource.
@@ -523,7 +531,7 @@ public enum MiriamType {
* Constructor that initialize enum object.
*
* @param dbHomePage
- * homepage of the resource {@link #dbHomepage}
+ * home page of the resource {@link #dbHomepage}
* @param commonName
* {@link #commonName}
* @param uris
@@ -541,7 +549,7 @@ public enum MiriamType {
* Constructor that initialize enum object.
*
* @param dbHomePage
- * homepage of the resource {@link #dbHomepage}
+ * home page of the resource {@link #dbHomepage}
* @param commonName
* {@link #commonName}
* @param uris
@@ -573,7 +581,7 @@ public enum MiriamType {
* Constructor that initialize enum object.
*
* @param dbHomePage
- * homepage of the resource {@link #dbHomepage}
+ * home page of the resource {@link #dbHomepage}
* @param commonName
* {@link #commonName}
* @param uri
--
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