From 016cf90c7196f9a8381726a65a9a1cc3afad29bb Mon Sep 17 00:00:00 2001
From: Piotr Gawron <piotr.gawron@uni.lu>
Date: Fri, 30 Jun 2017 10:49:13 +0200
Subject: [PATCH] rename parameter
---
.../alias/CompartmentAliasXmlParser.java | 48 +++++++++----------
1 file changed, 24 insertions(+), 24 deletions(-)
diff --git a/converter-CellDesigner/src/main/java/lcsb/mapviewer/converter/model/celldesigner/alias/CompartmentAliasXmlParser.java b/converter-CellDesigner/src/main/java/lcsb/mapviewer/converter/model/celldesigner/alias/CompartmentAliasXmlParser.java
index 71c0aa5f0c..f3a8bf8492 100644
--- a/converter-CellDesigner/src/main/java/lcsb/mapviewer/converter/model/celldesigner/alias/CompartmentAliasXmlParser.java
+++ b/converter-CellDesigner/src/main/java/lcsb/mapviewer/converter/model/celldesigner/alias/CompartmentAliasXmlParser.java
@@ -127,57 +127,57 @@ public class CompartmentAliasXmlParser extends AbstractAliasXmlParser<Compartmen
}
@Override
- public String toXml(Compartment alias) {
+ public String toXml(Compartment compartment) {
StringBuilder sb = new StringBuilder("");
sb.append("<celldesigner:compartmentAlias ");
- sb.append("id=\"" + alias.getElementId() + "\" ");
- sb.append("compartment=\"" + elements.getElementId(alias) + "\">\n");
+ sb.append("id=\"" + compartment.getElementId() + "\" ");
+ sb.append("compartment=\"" + elements.getElementId(compartment) + "\">\n");
boolean bounds = true;
- if (alias.getClass().getName().equals(SquareCompartment.class.getName())) {
+ if (compartment.getClass().getName().equals(SquareCompartment.class.getName())) {
sb.append("<celldesigner:class>SQUARE</celldesigner:class>\n");
- } else if (alias.getClass().getName().equals(OvalCompartment.class.getName())) {
+ } else if (compartment.getClass().getName().equals(OvalCompartment.class.getName())) {
sb.append("<celldesigner:class>OVAL</celldesigner:class>\n");
- } else if (alias.getClass().getName().equals(BottomSquareCompartment.class.getName())) {
+ } else if (compartment.getClass().getName().equals(BottomSquareCompartment.class.getName())) {
sb.append("<celldesigner:class>SQUARE_CLOSEUP_NORTH</celldesigner:class>\n");
bounds = false;
- sb.append("<celldesigner:point x=\"10\" y=\"" + alias.getY() + "\"/>");
- } else if (alias.getClass().getName().equals(TopSquareCompartment.class.getName())) {
+ sb.append("<celldesigner:point x=\"10\" y=\"" + compartment.getY() + "\"/>");
+ } else if (compartment.getClass().getName().equals(TopSquareCompartment.class.getName())) {
sb.append("<celldesigner:class>SQUARE_CLOSEUP_SOUTH</celldesigner:class>\n");
bounds = false;
- sb.append("<celldesigner:point x=\"10\" y=\"" + alias.getY() + "\"/>");
- } else if (alias.getClass().getName().equals(LeftSquareCompartment.class.getName())) {
+ sb.append("<celldesigner:point x=\"10\" y=\"" + compartment.getY() + "\"/>");
+ } else if (compartment.getClass().getName().equals(LeftSquareCompartment.class.getName())) {
sb.append("<celldesigner:class>SQUARE_CLOSEUP_EAST</celldesigner:class>\n");
bounds = false;
- sb.append("<celldesigner:point x=\"" + alias.getWidth() + "\" y=\"10\"/>");
- } else if (alias.getClass().getName().equals(RightSquareCompartment.class.getName())) {
+ sb.append("<celldesigner:point x=\"" + compartment.getWidth() + "\" y=\"10\"/>");
+ } else if (compartment.getClass().getName().equals(RightSquareCompartment.class.getName())) {
sb.append("<celldesigner:class>SQUARE_CLOSEUP_WEST</celldesigner:class>\n");
bounds = false;
- sb.append("<celldesigner:point x=\"" + alias.getX() + "\" y=\"10\"/>");
+ sb.append("<celldesigner:point x=\"" + compartment.getX() + "\" y=\"10\"/>");
} else {
- throw new NotImplementedException("Unknown compartment class: " + alias.getClass());
+ throw new NotImplementedException("Unknown compartment class: " + compartment.getClass());
}
if (bounds) {
sb.append("<celldesigner:bounds ");
- sb.append("x=\"" + alias.getX() + "\" ");
- sb.append("y=\"" + alias.getY() + "\" ");
- sb.append("w=\"" + alias.getWidth() + "\" ");
- sb.append("h=\"" + alias.getHeight() + "\"/>\n");
+ sb.append("x=\"" + compartment.getX() + "\" ");
+ sb.append("y=\"" + compartment.getY() + "\" ");
+ sb.append("w=\"" + compartment.getWidth() + "\" ");
+ sb.append("h=\"" + compartment.getHeight() + "\"/>\n");
}
sb.append("<celldesigner:namePoint ");
- sb.append("x=\"" + alias.getNamePoint().getX() + "\" ");
- sb.append("y=\"" + alias.getNamePoint().getY() + "\"/>\n");
+ sb.append("x=\"" + compartment.getNamePoint().getX() + "\" ");
+ sb.append("y=\"" + compartment.getNamePoint().getY() + "\"/>\n");
sb.append("<celldesigner:doubleLine ");
- sb.append("thickness=\"" + alias.getThickness() + "\" ");
- sb.append("outerWidth=\"" + alias.getOuterWidth() + "\" ");
- sb.append("innerWidth=\"" + alias.getInnerWidth() + "\"/>\n");
+ sb.append("thickness=\"" + compartment.getThickness() + "\" ");
+ sb.append("outerWidth=\"" + compartment.getOuterWidth() + "\" ");
+ sb.append("innerWidth=\"" + compartment.getInnerWidth() + "\"/>\n");
sb.append("<celldesigner:paint ");
- sb.append("color=\"" + colorToString(alias.getColor()) + "\" scheme=\"Color\"/>\n");
+ sb.append("color=\"" + colorToString(compartment.getColor()) + "\" scheme=\"Color\"/>\n");
sb.append("</celldesigner:compartmentAlias>\n");
--
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