pom.xml 5.32 KB
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<project xmlns="http://maven.apache.org/POM/4.0.0"
	xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
	xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
	<modelVersion>4.0.0</modelVersion>
	<parent>
		<groupId>lcsb.mapviewer</groupId>
		<artifactId>parent</artifactId>
		<version>1.0</version>
	</parent>
	<artifactId>pathvisio</artifactId>
	<name>Pathvisio plugin</name>

	<!-- <packaging>bundle</packaging> <build> <plugins> <plugin> <groupId>org.apache.felix</groupId> 
		<artifactId>maven-bundle-plugin</artifactId> <version>4.0.0</version> <extensions>true</extensions> 
		<configuration> <instructions> <Bundle-Activator>lcsb.mapviewer.wikipathway.Activator</Bundle-Activator> 
		<Bundle-Name>CellDesigner plugin v.${svnversion}</Bundle-Name> <Embed-Transitive>true</Embed-Transitive> 
		<Embed-Dependency>*;scope=compile|runtime;inline=false</Embed-Dependency> 
		<Import-Package>!org.relaxng.datatype, !org.slf4j, !org.slf4j.spi, !com.fasterxml.classmate, 
		!com.fasterxml.classmate.members, !com.ibm.uvm.tools, !com.sun.jdi, !com.sun.jdi.connect, 
		!com.sun.jdi.event, !com.sun.jdi.request, !com.sun.jdmk.comm, !com.sun.msv.datatype, 
		!com.sun.msv.datatype.xsd, !com.google.gson, !javax.imageio, !javax.jmdns, 
		!javax.jms, !javax.mail, !javax.mail.internet, !javax.management, !javax.naming, 
		!javax.naming.event, !javax.naming.spi, !javax.security.auth, !javax.security.jacc, 
		!javax.sql, !javax.swing, !javax.swing.border, !javax.swing.event, !javax.swing.filechooser, 
		!javax.swing.plaf, !javax.swing.table, !javax.swing.text, !javax.swing.text.html, 
		!javax.swing.tree, !javax.validation, !javax.validation.constraints, !javax.validation.groups, 
		!javax.validation.metadata, !javax.xml, !javax.xml.bind, !javax.xml.bind.annotation, 
		!javax.xml.bind.annotation.adapters, !javax.xml.namespace, !javax.xml.parsers, 
		!javax.xml.stream, !javax.xml.stream.events, !javax.xml.stream.util, !javax.xml.transform, 
		!javax.xml.transform.dom, !javax.xml.transform.sax, !javax.xml.transform.stream, 
		!javax.xml.validation, !oracle.xml.parser, !oracle.xml.parser.v2, !org.apache.batik.dom, 
		!org.apache.batik.svggen, !org.apache.batik.transcoder, !org.apache.batik.transcoder.image, 
		!org.apache.commons.math, !org.apache.commons.math.stat, !org.apache.commons.math.stat.inference, 
		!org.apache.commons.vfs2, !org.apache.fop.svg, !org.apache.tools.ant, !org.apache.tools.ant.taskdefs, 
		!org.apache.tools.ant.types, !org.bridgedb, !org.bridgedb.bio, !org.bridgedb.gui, 
		!org.bridgedb.rdb.construct, !org.gjt.xpp, !org.jaxen, !org.jaxen.jdom, !org.jaxen.dom4j, 
		!org.jaxen.pattern, !org.jaxen.saxpath, !org.jboss.jandex, !org.jboss.logmanager, 
		!org.jdom, !org.jdom.input, !org.jdom.output, !org.pathvisio.data, !org.w3c.dom, 
		!org.w3c.dom.events, !org.w3c.dom.ranges, !org.w3c.dom.traversal, !org.xml.sax, 
		!org.xml.sax.ext, !org.xml.sax.helpers, !org.xmlpull.v1, !sun.io, !sun.misc, 
		org.osgi.framework;version=1.3.0,*</Import-Package> <Require-Bundle>org.pathvisio.core;bundle-version=3.0.0, 
		org.pathvisio.desktop;bundle-version=3.0.0, org.pathvisio.gui;bundle-version=3.0.0 
		</Require-Bundle> </instructions> </configuration> </plugin> </plugins> </build> -->
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	<repositories>
		<repository>
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			<id>repo</id>
			<releases>
				<enabled>true</enabled>
				<checksumPolicy>ignore</checksumPolicy>
			</releases>
			<snapshots>
				<enabled>false</enabled>
			</snapshots>
			<url>file://${project.basedir}/repo</url>
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		</repository>
	</repositories>

	<dependencies>
		<dependency>
			<groupId>org.pathvisio</groupId>
			<artifactId>core</artifactId>
			<version>${pathvisio.version}</version>
		</dependency>
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		<dependency>
			<groupId>org.pathvisio</groupId>
			<artifactId>desktop</artifactId>
			<version>${pathvisio.version}</version>
		</dependency>
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		<dependency>
			<groupId>org.pathvisio</groupId>
			<artifactId>gui</artifactId>
			<version>${pathvisio.version}</version>
		</dependency>
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		<dependency>
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			<groupId>lcsb.mapviewer</groupId>
			<artifactId>model</artifactId>
			<version>1.0</version>
		</dependency>
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		<dependency>
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			<groupId>lcsb.mapviewer</groupId>
			<artifactId>converter-CellDesigner</artifactId>
			<version>1.0</version>
		</dependency>
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		<dependency>
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			<groupId>lcsb.mapviewer</groupId>
			<artifactId>converter-graphics</artifactId>
			<scope>test</scope>
			<version>1.0</version>
		</dependency>
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		<!-- Log4J2 -->
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		<dependency>
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			<groupId>org.apache.logging.log4j</groupId>
			<artifactId>log4j-api</artifactId>
			<version>${log4j2.version}</version>
		</dependency>
		<dependency>
			<groupId>org.apache.logging.log4j</groupId>
			<artifactId>log4j-core</artifactId>
			<version>${log4j2.version}</version>
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		</dependency>

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		<dependency>
			<groupId>org.apache.felix</groupId>
			<artifactId>org.osgi.core</artifactId>
			<version>${osgi.version}</version>
		</dependency>
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		<dependency>
			<groupId>junit</groupId>
			<artifactId>junit</artifactId>
			<version>${junit.version}</version>
			<scope>test</scope>
		</dependency>

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		<!-- mockito used for testing -->
		<dependency>
			<groupId>org.mockito</groupId>
			<artifactId>mockito-core</artifactId>
			<version>${mockito.version}</version>
			<scope>test</scope>
		</dependency>


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	</dependencies>
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</project>