sbmlfiles = [ # a test model from BIGG ( "e_coli_core.xml", "http://bigg.ucsd.edu/static/models/e_coli_core.xml", "b4db506aeed0e434c1f5f1fdd35feda0dfe5d82badcfda0e9d1342335ab31116", 72, 95, ), # a relatively new non-curated model from biomodels ( "T1M1133.xml", "https://www.ebi.ac.uk/biomodels/model/download/MODEL1909260004.4?filename=T1M1133.xml", "2b1e615558b6190c649d71052ac9e0dc1635e3ad281e541bc7d4fdf2892a5967", 2517, 3956, ), # a curated model from biomodels ( "Dasgupta2020.xml", "https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000973.3?filename=Dasgupta2020.xml", "958b131d4df2f215dae68255433542f228601db0326d26a54efd08ddcf823489", 2, 6, ), ] @testset "Loading of models from various sources" begin for (sbmlfile, url, hash, expected_mets, expected_rxns) in sbmlfiles if !isfile(sbmlfile) Downloads.download(url, sbmlfile) end cksum = bytes2hex(sha256(open(sbmlfile))) if cksum != hash @warn "The downloaded model `$sbmlfile' seems to be different from the expected one. Tests will likely fail." cksum end @testset "Loading of $sbmlfile" begin mdl = readSBML(sbmlfile) @test typeof(mdl) == Model mets, rxns, _ = getS(mdl) @test length(mets) == expected_mets @test length(rxns) == expected_rxns end end end