test that EColi model from BIGG loads correctly

this checks whether the fix of #16 works

test/loadEColi.jl → test/ecoli_flux.jl

 
-sbmlfile = "EColi.xml"
+sbmlfile = "Ec_core_flux1.xml"
 
 if !isfile(sbmlfile)
     download("http://systemsbiology.ucsd.edu/sites/systemsbiology.ucsd.edu/files/Attachments/Images/InSilicoOrganisms/Ecoli/Ecoli_SBML/Ec_core_flux1.xml", sbmlfile)
@@ -10,7 +10,7 @@ if cksum != "01a883b364fa60582101ca1e270515e7fcb3fb2f60084d92e5ee45f9f72bbe50"
     @warn "The downloaded E Coli core flux model seems to be different from the expected one. Tests will likely fail." cksum
 end
 
-@testset "SBML model loading" begin
+@testset "SBML flux model loading" begin
     mdl = readSBML(sbmlfile)
 
     @test typeof(mdl) == Model

test/ecoli_modelonly.jl

+
+sbmlfile = "e_coli_core.xml"
+
+if !isfile(sbmlfile)
+    download("http://bigg.ucsd.edu/static/models/e_coli_core.xml", sbmlfile)
+end
+
+cksum = bytes2hex(sha256(open(sbmlfile)))
+if cksum != "b4db506aeed0e434c1f5f1fdd35feda0dfe5d82badcfda0e9d1342335ab31116"
+    @warn "The downloaded E Coli core model seems to be different from the expected one. Tests will likely fail." cksum
+end
+
+@testset "SBML model-only file loading" begin
+    mdl = readSBML(sbmlfile)
+
+    @test typeof(mdl) == Model
+
+    mets, rxns, _ = getS(mdl)
+
+    @test length(mets) == 72
+    @test length(rxns) == 95
+end

test/runtests.jl

@@ -5,5 +5,6 @@ import Pkg
 
 @testset "SBML test suite" begin
     include("version.jl")
-    include("loadEColi.jl")
+    include("ecoli_flux.jl")
+    include("ecoli_modelonly.jl")
 end