Commits · 7a7013af02e2d2b380efa751d2fab1475a2e259b · LCSB-BioCore / COBREXA.jl

This project is mirrored from https://github.com/LCSB-BioCore/COBREXA.jl.git. Pull mirroring updated Feb 07, 2023.

08 Jun, 2021 40 commits
- improved doctest · 7a7013af
  St. Elmo authored May 27, 2021
```
Former-commit-id: 268e2888
```
  7a7013af
- automatic formatting changes · a3c8be0c
  cylon-x authored May 27, 2021 and St. Elmo committed Jun 08, 2021
```
Former-commit-id: 4e51948a
```
  a3c8be0c
- fix doctest again · 0952bb6f
  St. Elmo authored May 27, 2021
```
Former-commit-id: 64aea85d
```
  0952bb6f
- automatic formatting changes · bb6fcecc
  cylon-x authored May 27, 2021 and St. Elmo committed Jun 08, 2021
```
Former-commit-id: cbb81b31
```
  bb6fcecc
- doctest fix · 3a76037e
  St. Elmo authored May 27, 2021
```
Former-commit-id: fbf0f5d4
```
  3a76037e
- fixed reviews · e1473b05
  St. Elmo authored May 27, 2021
```
Former-commit-id: e1a75ed0
```
  e1473b05
- automatic formatting changes · 9889992a
  cylon-x authored May 26, 2021 and St. Elmo committed Jun 08, 2021
```
Former-commit-id: 9ee80312
```
  9889992a
- finished community stuff · da8fd85b
  St. Elmo authored May 26, 2021
```
Former-commit-id: 02f2cc9f
```
  da8fd85b
- added metabolite removal function · dcf6b443
  St. Elmo authored May 26, 2021
```
Former-commit-id: 0d629d65
```
  dcf6b443
- automatic formatting changes · 06aec85c
  cylon-x authored May 26, 2021 and St. Elmo committed Jun 08, 2021
```
Former-commit-id: 161baf07
```
  06aec85c
- fix test · 47d6f578
  St. Elmo authored May 26, 2021
```
Former-commit-id: bea6c703
```
  47d6f578
- automatic formatting changes · ba878edf
  cylon-x authored May 26, 2021 and St. Elmo committed Jun 08, 2021
```
Former-commit-id: 0794963b
```
  ba878edf
- removed misleading comment · 20f85e37
  St. Elmo authored May 26, 2021
```
Former-commit-id: 05c3f817
```
  20f85e37
- community tests done · 725207db
  St. Elmo authored May 26, 2021
```
Former-commit-id: 4c3b1f3c
```
  725207db
- started adding tests · f1492093
  St. Elmo authored May 26, 2021
```
Former-commit-id: f1444f5d
```
  f1492093
- automatic formatting changes · c5132ba7
  cylon-x authored May 25, 2021 and St. Elmo committed Jun 08, 2021
```
Former-commit-id: 5a97cd7d
```
  c5132ba7
- fix hidden bug in join · 86b6a806
  St. Elmo authored May 25, 2021
```
Former-commit-id: c54738b8
```
  86b6a806
- automatic formatting changes · 525e2db3
  cylon-x authored May 21, 2021 and St. Elmo committed Jun 08, 2021
```
Former-commit-id: b16bb11d
```
  525e2db3
- improved docstring of join · 07c15dae
  St. Elmo authored May 21, 2021
```
Former-commit-id: e2a0d430
```
  07c15dae
- added example · 6c5f2b66
  St. Elmo authored May 21, 2021
```
Former-commit-id: ef14232b
```
  6c5f2b66
- partially implemented push! · beb0d07d
  St. Elmo authored May 19, 2021
```
Former-commit-id: fef1eedf
```
  beb0d07d
- automatic formatting changes · 6f98de1a
  cylon-x authored May 19, 2021 and St. Elmo committed Jun 08, 2021
```
Former-commit-id: 54c0630b
```
  6f98de1a
- improve species naming · f8930d17
  St. Elmo authored May 19, 2021
```
Former-commit-id: f7dcb191
```
  f8930d17
- fix join biomass · 7de9b0e6
  St. Elmo authored May 19, 2021
```
Former-commit-id: 4b098346
```
  7de9b0e6
- fix error with join with biomass obj · 736d9553
  St. Elmo authored May 19, 2021
```
Former-commit-id: c3219cab
```
  736d9553
- automatic formatting changes · bcf8045d
  cylon-x authored May 19, 2021 and St. Elmo committed Jun 08, 2021
```
Former-commit-id: d319bc05
```
  bcf8045d
- join finished · 834ff875
  St. Elmo authored May 19, 2021
```
Former-commit-id: 1bfd95f3
```
  834ff875
- working basic join · 7acfe67b
  St. Elmo authored May 19, 2021
```
Former-commit-id: 63e43593
```
  7acfe67b
- added basic join · 0eb09640
  St. Elmo authored May 19, 2021
```
Former-commit-id: c5f673d7
```
  0eb09640
- Merge pull request #314 from LCSB-BioCore/mk-exchange-compat · 48eb8515
  Miroslav Kratochvil authored Jun 08, 2021
```
backwards compatibility with find_exchange_reactions and pals

Former-commit-id: 1011dcb5
```
  48eb8515
- backwards compatibility with find_exchange_reactions and pals · a473a4dc
  Miroslav Kratochvil authored Jun 08, 2021
```
Former-commit-id: 7136c4d2
```
  a473a4dc
- Merge pull request #312 from LCSB-BioCore/mo-fix-atoms · 04e46fdb
  Laurent Heirendt authored Jun 08, 2021
```
🩹 ✨ Atoms in reactions and overall flux

Former-commit-id: 7194e654
```
  04e46fdb
- make test more accurate · c8b4fa39
  St. Elmo authored Jun 08, 2021
```
Former-commit-id: 65f167bb
```
  c8b4fa39
- fix tests · e6d339dd
  St. Elmo authored Jun 08, 2021
```
Former-commit-id: ecbadf1f
```
  e6d339dd
- updated tests · e85c1a1b
  St. Elmo authored Jun 08, 2021
```
Former-commit-id: 49be4436
```
  e85c1a1b
- fix error · 0fd55fae
  St. Elmo authored Jun 08, 2021
```
Former-commit-id: 004b18fd
```
  0fd55fae
- Merge pull request #297 from LCSB-BioCore/mo-add-find-exchanges · febe9a11
  Miroslav Kratochvil authored Jun 08, 2021
```
✨ Add `looks_like_xxx` functions to make finding specific reaction/metabolite types easy

Former-commit-id: 55797f58
```
  febe9a11
- how did these tests pass before? · f46f7023
  St. Elmo authored Jun 08, 2021
```
Former-commit-id: 7e6d9fa7
```
  f46f7023
- eta-expansion · ac8259b1
  St. Elmo authored Jun 08, 2021
```
Former-commit-id: 09fbfc67
```
  ac8259b1
- fix def implt · 26a2986f
  St. Elmo authored Jun 08, 2021
```
Former-commit-id: e49f4ab5
```
  26a2986f