This project is mirrored from https://github.com/LCSB-BioCore/COBREXA.jl.git.
Pull mirroring updated .
- 19 Apr, 2021 17 commits
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Miroslav Kratochvil authored
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Miroslav Kratochvil authored
It would be nice if we knew how to actually _write_ the SBML model back to disk. But that's a completely different story (and package).
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Miroslav Kratochvil authored
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Miroslav Kratochvil authored
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Miroslav Kratochvil authored
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Miroslav Kratochvil authored
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Miroslav Kratochvil authored
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Miroslav Kratochvil authored
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Miroslav Kratochvil authored
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Miroslav Kratochvil authored
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Miroslav Kratochvil authored
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Miroslav Kratochvil authored
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Miroslav Kratochvil authored
support n_genes accessor
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Miroslav Kratochvil authored
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Laurent Heirendt authored
Prepare accessors for genetic and chemical information
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Laurent Heirendt authored
The Big Rename of LinearModel to CoreModel
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Laurent Heirendt authored
make the abstract interface easily implementable
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- 18 Apr, 2021 5 commits
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Miroslav Kratochvil authored
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Miroslav Kratochvil authored
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Miroslav Kratochvil authored
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Miroslav Kratochvil authored
We don't need the `where` clauses if there's just one MetabolicModel
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Miroslav Kratochvil authored
Design decision: Because we can't have typeclasses even as type tags, we can not enforce that the functions will be able to statically typecheck that the given model can in fact return e.g. a genetics-relevant information. Failing deep in the code because of missing implementation is not an option either. This is the third choice -- if something's missing, we should just return a correctly typed "empty" state. Arguably this is good also for converting and writing models, where it reduces the amount of mixed possibilities for the conversion.
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- 16 Apr, 2021 3 commits
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Miroslav Kratochvil authored
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Miroslav Kratochvil authored
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Miroslav Kratochvil authored
add automated documentation tests
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- 15 Apr, 2021 15 commits
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Laurent Heirendt authored
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Laurent Heirendt authored
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Laurent Heirendt authored
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Laurent Heirendt authored
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Laurent Heirendt authored
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Laurent Heirendt authored
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Laurent Heirendt authored
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Laurent Heirendt authored
add docker img for deploy doc stage
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Laurent Heirendt authored
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Laurent Heirendt authored
Small fixes
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St. Elmo authored
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Laurent Heirendt authored
add codecov and bot for formatting
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Laurent Heirendt authored
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Laurent Heirendt authored
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