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LCSB-BioCore
COBREXA.jl
Commits
f8cd84a3
Unverified
Commit
f8cd84a3
authored
May 16, 2022
by
St. Elmo
Browse files
use constants
parent
4edb1b3a
Pipeline
#56562
failed with stages
in 2 minutes and 4 seconds
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1
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1
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src/reconstruction/gapfill_minimum_reactions.jl
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f8cd84a3
...
...
@@ -45,7 +45,7 @@ function gapfill_minimum_reactions(
weights
=
fill
(
1.0
,
length
(
universal_reactions
)),
objective_upper_bound
=
COBREXA
.
_constants
.
default_reaction_bound
,
ignore_reactions
=
[],
max_gaps_fillable
=
COBREXA
.
_constants
.
max_gaps_fillable
,
max_gaps_fillable
=
_constants
.
max_gaps_fillable
,
)
# constraints from model to be gap filled
S_model
=
stoichiometry
(
model
)
...
...
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