Verified Commit eee954c2 authored by Laurent Heirendt's avatar Laurent Heirendt
Browse files

change to pkg manager commands

parent 9d3297ea
......@@ -45,7 +45,7 @@ installation-related difficulties.
Using the Julia package manager to install `COBREXA` is straightforward -- after starting Julia, type:
```julia
import Pkg; Pkg.add("GigaSOM");
] add COBREXA
```
> All these commands should be run from Julia at the `julia>` prompt.
......@@ -63,14 +63,13 @@ The first loading of the `COBREXA` package may take several minutes to complete
If you run a non-standard platform (e.g. a customized operating systems), or if you added any modifications to the `COBREXA` source code, you may want to run the test suite to ensure that everything works as expected:
```julia
import Pkg; Pkg.test("COBREXA")
] test COBREXA
```
## Example
Let's use `COBREXA.jl` to perform classic flux balance analysis on an *E. coli* community.
```julia
using COBREXA
......@@ -85,6 +84,7 @@ model_3 = read_model(model_file)
# Build an exascale model
exascale_model = join(model_1, model_2, model_3,...)
```
More funcionality is described in the documention, e.g. model construction and analysis in pure Julia.
## Citations
......
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