From c85856f4f3ec669f448885e8f9c322a0867322f1 Mon Sep 17 00:00:00 2001
From: Mirek Kratochvil <miroslav.kratochvil@uni.lu>
Date: Mon, 7 Feb 2022 11:39:16 +0100
Subject: [PATCH] pwd.
---
cobrexa.def | 3 ++-
1 file changed, 2 insertions(+), 1 deletion(-)
diff --git a/cobrexa.def b/cobrexa.def
index 14b9f23a7..85d9f3534 100644
--- a/cobrexa.def
+++ b/cobrexa.def
@@ -3,10 +3,11 @@ From: cylon-x/lcsb-biocore/julia-base:latest
%setup
export GIT_WORK_TREE="${SINGULARITY_ROOTFS}/project/"
- export GIT_DIR="`PWD`/.git"
+ export GIT_DIR="`pwd`/.git"
mkdir -p "${GIT_WORK_TREE}"
git checkout -f
+
%post
export JULIA_DEPOT_PATH=/user/.julia
export PATH=/opt/julia/bin:$PATH
--
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