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LCSB-BioCore
COBREXA.jl
Commits
908f6dac
Commit
908f6dac
authored
May 16, 2022
by
Miroslav Kratochvil
Browse files
leftover trailing spaces
parent
20bdfcf1
Pipeline
#56582
passed with stages
in 11 minutes and 37 seconds
Changes
2
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2
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src/base/types/wrappers/GeckoModel.jl
View file @
908f6dac
...
...
@@ -97,8 +97,8 @@ end
objective(model::GeckoModel)
Return the objective of the [`GeckoModel`](@ref). Note, the objective is with
respect to the internal variables, i.e. [`reactions(model)`](@ref), which are
the unidirectional reactions and the genes involved in enzymatic reactions that
respect to the internal variables, i.e. [`reactions(model)`](@ref), which are
the unidirectional reactions and the genes involved in enzymatic reactions that
have kinetic data.
"""
objective
(
model
::
GeckoModel
)
=
model
.
objective
...
...
test/analysis/gecko.jl
View file @
908f6dac
...
...
@@ -51,7 +51,7 @@
@test
isapprox
(
prot_mass
,
total_gene_product_mass
,
atol
=
TEST_TOLERANCE
)
@test
isapprox
(
prot_mass
,
mass_groups
[
"uncategorized"
],
atol
=
TEST_TOLERANCE
)
# test enzyme objective
# test enzyme objective
growth_lb
=
rxn_fluxes
[
"BIOMASS_Ecoli_core_w_GAM"
]
*
0.9
opt_model
=
flux_balance_analysis
(
gm
,
...
...
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