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LCSB-BioCore
COBREXA.jl
Commits
8ed7d68d
Commit
8ed7d68d
authored
Aug 16, 2021
by
Miroslav Kratochvil
Browse files
fix the docstring
parent
5bb05b29
Pipeline
#45433
passed with stages
in 15 minutes and 5 seconds
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1
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src/analysis/envelopes.jl
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8ed7d68d
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@@ -51,7 +51,8 @@ objective_envelope(model::MetabolicModel, rids::Vector{String}, args...; kwargs.
model::MetabolicModel,
ridxs::Vector{Int},
optimizer;
lattice = envelope_lattice(model, ridxs),
lattice_args = (),
lattice = envelope_lattice(model, ridxs; lattice_args...),
kwargs...,
)
...
...
@@ -71,7 +72,9 @@ Returns a named tuple that contains `lattice` with reference values of the
metabolites, and an N-dimensional array `values` with the computed objective
values, where N is the number of specified reactions. Because of the
increasing dimensionality, the computation gets very voluminous with increasing
length of `ridxs`.
length of `ridxs`. The `lattice` for computing the optima can be supplied in
the argument; by default it is created by [`envelope_lattice`](@ref) called on
the model and reaction indexes (`lattice_args` are forwarded to the call.
`kwargs` are internally forwarded to [`screen_optmodel_modifications`](@ref).
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