Issues · Laura Denies / PathoFact

New issue

Error in rule SignalPN_aggregate

#89 · created Apr 30, 2022 by GaoyangLuo
- 1
- 1
updated May 01, 2022
testing module fails deepARG- how to update deepARG within PathoFact?

#88 · created Apr 15, 2022 by RahilRyder
- 0
updated Apr 15, 2022
Error in rule SignalPN_aggregate

#87 · created Apr 03, 2022 by Ella Kantor
- 1
updated Apr 30, 2022
qsub: Bad UID for job execution

#86 · created Feb 28, 2022 by GaoyangLuo
- CLOSED
- 0
updated Mar 02, 2022
Error in rule splitting

#85 · created Feb 24, 2022 by GaoyangLuo
- CLOSED
- 2
updated Mar 02, 2022
Error in rule run_VirSorter:

#84 · created Jan 25, 2022 by yuzie0314
- 9
updated Jan 27, 2022
Finished NCBI genomes and PathoFact

#83 · created Oct 30, 2021 by vkisand
- 3
updated Nov 04, 2021
Error in rule Plasmid_aggregate

#82 · created Oct 19, 2021 by Ella Kantor
- 4
updated Nov 02, 2021
Cluster documentation

#81 · created Sep 28, 2021 by Benjamin Wingfield
- 1
updated Oct 29, 2021
Question about execution Sna

#80 · created Sep 25, 2021 by adolfoisla incident
- 1
updated Oct 29, 2021
Adding information in the final PathoFact report

#79 · created Sep 23, 2021 by ntromas
- 2
updated Oct 29, 2021
ownHMM_library.R script fails with empty input files

#78 · created Sep 08, 2021 by Susheel Busi
- 1
- 6
updated Nov 12, 2021
Feature request: include ARO in output reports

#77 · created Aug 09, 2021 by Benjamin Wingfield enhancement
- 1
updated Sep 01, 2021
hmm.R

#76 · created Aug 03, 2021 by Matthew Macowan
- 1
updated Sep 06, 2021
CondaVerificationError after installation

#75 · created Jul 09, 2021 by Andrew
- 1
updated Sep 01, 2021
PathoFact block in the DVF step

#74 · created Jun 21, 2021 by neptuneyt
- 1
updated Jul 06, 2021
only small fasta files (around 6000~7000 contigs) can work in Vir and Tox module

#73 · created May 28, 2021 by Xuanji Li
- CLOSED
- 1
updated Aug 31, 2021
Test workflow and common run fails at RGI step at biopython

#72 · created May 19, 2021 by Michal Zeman dependencies documentation
- CLOSED
- 20
updated Sep 06, 2021
The unknown task termination of multiple input genomes

#71 · created May 11, 2021 by neptuneyt
- 4
updated Sep 06, 2021
Unclassified MGE

#70 · created May 07, 2021 by ntromas
- CLOSED
- 6
updated Aug 28, 2021