SyntaxError in line 85, Preprocessing.smk
Hey, I have read the PathoFact publication. Very impressing, thank you very much! I have tried to install and test the tool with my own data, but I always get stuck in the initial run (also with the test run).
I get the following error message:
SyntaxError in line 85 of /PathoFact/rules/Universal/Preprocessing.smk:
File "/PathoFact/Snakefile", line 8, in <module>
File "/PathoFact/workflows/Combine_PathoFact_workflow.smk", line 3, in <module>
Any ideas on how I can fix the problem?
Thank you very much in advance!