Commit fef0c395 authored by Laura Denies's avatar Laura Denies
Browse files

Update README.md

parent 61822371
...@@ -25,15 +25,6 @@ chmod u+x Miniconda3-latest-Linux-x86_64.sh ...@@ -25,15 +25,6 @@ chmod u+x Miniconda3-latest-Linux-x86_64.sh
./Miniconda3-latest-Linux-x86_64.sh # follow the instructions ./Miniconda3-latest-Linux-x86_64.sh # follow the instructions
``` ```
## Pipeline environment
```bash
# create the conda environment
conda env create -f=envs/PathoFact.yaml
```
You can activate and deactivate the environment using `conda activate PathoFact` and `conda deactivate`, respectively.
## PathoFact ## PathoFact
Clone the repository and its sub-modules: Clone the repository and its sub-modules:
...@@ -52,6 +43,15 @@ Perform futher installation/configuration steps: ...@@ -52,6 +43,15 @@ Perform futher installation/configuration steps:
./set-up.sh ./set-up.sh
``` ```
## Pipeline environment
```bash
# create the conda environment
conda env create -f=envs/PathoFact.yaml
```
You can activate and deactivate the environment using `conda activate PathoFact` and `conda deactivate`, respectively.
## Dependency: `SignalP` ## Dependency: `SignalP`
Required version: `4.1` Required version: `4.1`
......
Markdown is supported
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment