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Laura Denies
PathoFact
Commits
f01fdaba
Commit
f01fdaba
authored
Apr 30, 2020
by
Valentina Galata
Browse files
bug fix in test/Snakefile: rule input based on sub-workflow (related to issue
#33
)
parent
fc161ba3
Changes
1
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test/Snakefile
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f01fdaba
...
...
@@ -69,14 +69,14 @@ rule all:
CHECKS
# Compare files
rule:
rule
check
:
input:
exp="{OUTDIR}/{project}/{{bname}}".format(
OUTDIR=config["OUTDIR_test"], project=config["project_test"]
),
res="{OUTDIR}/{project}/{{bname}}".format(
res=
pathofact(
"{OUTDIR}/{project}/{{bname}}".format(
OUTDIR=config["OUTDIR"], project=config["project"]
)
)
)
output:
"{OUTDIR}/{project}/{{bname}}.checked".format(
OUTDIR=config["OUTDIR"], project=config["project"]
...
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