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Laura Denies
PathoFact
Commits
d0e18ca4
Commit
d0e18ca4
authored
Apr 21, 2020
by
Valentina Galata
Browse files
cleaned up conda YAML files (issue
#23
)
parent
8facd498
Changes
7
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envs/Biopython.yaml
View file @
d0e18ca4
name
:
biopython
channels
:
-
conda-forge
-
bioconda
...
...
@@ -66,5 +65,3 @@ dependencies:
-
xorg-libxdmcp=1.1.3=h516909a_0
-
xz=5.2.4=h14c3975_4
-
zlib=1.2.11=h7b6447c_3
prefix
:
/home/users/ldenies/apps/miniconda3/envs/biopython
envs/DeepARG.yaml
View file @
d0e18ca4
name
:
AMR.yml
channels
:
-
conda-forge
-
bioconda
...
...
envs/DeepVirFinder.yaml
View file @
d0e18ca4
name
:
virfinder
channels
:
-
conda-forge
-
bioconda
...
...
@@ -67,5 +66,3 @@ dependencies:
-
xz=5.2.4=h14c3975_1001
-
yaml=0.1.7=h14c3975_1001
-
zlib=1.2.11=h516909a_1006
prefix
:
/home/users/ldenies/apps/miniconda3/envs/virfinder
envs/PlasFlow.yaml
View file @
d0e18ca4
...
...
@@ -88,4 +88,3 @@ dependencies:
-
zlib=1.2.8=3
# PlasFlow: should be installed from smaegol, NOT from pip
-
plasflow=1.1.0
envs/R.yaml
View file @
d0e18ca4
name
:
renv
channels
:
-
defaults
dependencies
:
...
...
@@ -234,5 +233,3 @@ dependencies:
-
zeromq=4.2.5=hf484d3e_1
-
zlib=1.2.11=h7b6447c_3
-
zstd=1.3.7=h0b5b093_0
prefix
:
/home/users/ldenies/apps/miniconda3/envs/r_env
envs/SeqKit.yaml
View file @
d0e18ca4
name
:
SeqKit
channels
:
-
conda-forge
-
bioconda
...
...
@@ -23,5 +22,3 @@ dependencies:
-
wheel=0.33.4=py36_0
-
xz=5.2.4=h14c3975_4
-
zlib=1.2.11=h7b6447c_3
prefix
:
/home/users/ldenies/apps/miniconda3/envs/SeqKit
envs/VirSorter.yaml
View file @
d0e18ca4
...
...
@@ -127,4 +127,3 @@ dependencies:
-
tk=8.6.10=hed695b0_0
-
virsorter=1.0.5=pl526h516909a_4
-
zlib=1.2.11=h516909a_1006
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