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Laura Denies
PathoFact
Commits
8743db8c
Commit
8743db8c
authored
May 15, 2020
by
Laura Denies
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Update config.yaml
parent
a2d12aeb
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config.yaml
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8743db8c
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@@ -13,7 +13,7 @@ OUTDIR: /path/to/samples
size_fasta
:
100000
# Workflow (default: "complete")
# complete: complete pipeline:
t
ox
in
+
v
ir
ulence
+
(
AMR
+ MGE)
prediction
# complete: complete pipeline:
T
ox +
V
ir + AMR prediction
# Tox: toxin prediction
# Vir: virulence prediction
# AMR: antimicrobial resistance (AMR) & mobile genetic element (MGE) prediction
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