Commit 78baf4ff authored by Valentina Galata's avatar Valentina Galata
Browse files

added setup for DeepARG in set-up.sh (issue #19)

parent 8807fe5b
......@@ -14,3 +14,14 @@ git clone https://github.com/simroux/VirSorter.git
cd VirSorter/Scripts
make clean
make
###########
# DeepARG #
###########
# From installation instructions: https://bitbucket.org/gusphdproj/deeparg-ss/src/master/
# replace path in options.py
sed -i 's@^path\s*=.*$@path = "'$(realpath submodules/deeparg-ss)'"@' submodules/deeparg-ss/options.py
# make DIAMOND binary executable
chmod +x submodules/deeparg-ss/bin/diamond
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